EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000041638 (Gene tree)
Gene ID: 231659
Gene Symbol: Gcn1l1
Alias: G431004K08Rik|GCN1L
Full Name: GCN1 general control of amino-acid synthesis 1-like 1 (yeast)
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 57401
Position: chr5: 115565254-115622654
Accession: 2444248
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000122964	-	643	-	-	- (aa)	-	-
ENSMUST00000139933	-	240	-	-	- (aa)	-	-
ENSMUST00000141472	-	2224	-	-	- (aa)	-	-
ENSMUST00000136041	-	5085	-	-	- (aa)	-	-
ENSMUST00000137523	-	754	-	-	- (aa)	-	-
ENSMUST00000202584	-	1918	-	-	- (aa)	-	-
ENSMUST00000094427	-	3857	-	-	- (aa)	-	-
ENSMUST00000125299	-	465	-	-	- (aa)	-	-
ENSMUST00000064454	-	8555	-	ENSMUSP00000069432	2671 (aa)	-	E9PVA8
ENSMUST00000129424	-	3689	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000041638's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000041638's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000041638	Gcn1l1	99	43.102	FBgn0039959	CG17514	99	42.990	Drosophila_melanogaster
ENSMUSG00000041638	Gcn1l1	100	94.010	ENSG00000089154	GCN1	100	94.010	Homo_sapiens
ENSMUSG00000041638	Gcn1l1	67	33.836	YGL195W	GCN1	67	34.177	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005515	protein binding	15937339.22404850.24333428.	IPI	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005844	polysome	23447528.	IDA	Component
GO:0006417	regulation of translation	-	IEA	Process
GO:0019887	protein kinase regulator activity	-	IEA	Function
GO:0019901	protein kinase binding	-	IEA	Function
GO:0033674	positive regulation of kinase activity	-	IEA	Process
GO:0034198	cellular response to amino acid starvation	24333428.	IDA	Process
GO:0036003	positive regulation of transcription from RNA polymerase II promoter in response to stress	24333428.	IDA	Process
GO:0043022	ribosome binding	-	IEA	Function
GO:1990253	cellular response to leucine starvation	23447528.	IDA	Process