EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000041747 (Gene tree)
Gene ID: 105372
Gene Symbol: Utp15
Alias: -
Full Name: UTP15 small subunit processome component
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 16197 bases
Position: chr13:98246845-98263041
Accession: 2145443
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000048204	UTP15_C	PF09384.10	2.3e-47	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000040972	-	4120	-	ENSMUSP00000048204	528 (aa)	-	Q8C7V3
ENSMUST00000224842	-	2328	-	-	- (aa)	-	-
ENSMUST00000225100	-	634	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000041747's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000041747's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000041747	Utp15	52	32.218	ENSMUSG00000023345	Poc1a	87	32.420
ENSMUSG00000041747	Utp15	54	30.275	ENSMUSG00000066148	Prpf4	65	30.275

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000041747	Utp15	97	90.078	ENSG00000164338	UTP15	100	96.923	Homo_sapiens
ENSMUSG00000041747	Utp15	93	65.859	ENSAPOG00000005857	utp15	94	65.859	Acanthochromis_polyacanthus
ENSMUSG00000041747	Utp15	95	91.451	ENSAMEG00000011501	UTP15	97	91.451	Ailuropoda_melanoleuca
ENSMUSG00000041747	Utp15	93	68.081	ENSACIG00000018915	utp15	94	68.081	Amphilophus_citrinellus
ENSMUSG00000041747	Utp15	93	66.465	ENSAOCG00000023576	utp15	94	66.465	Amphiprion_ocellaris
ENSMUSG00000041747	Utp15	93	66.263	ENSAPEG00000016524	utp15	94	66.263	Amphiprion_percula
ENSMUSG00000041747	Utp15	93	67.879	ENSATEG00000021278	utp15	94	67.879	Anabas_testudineus
ENSMUSG00000041747	Utp15	94	67.677	ENSAPLG00000008503	UTP15	99	67.677	Anas_platyrhynchos
ENSMUSG00000041747	Utp15	98	70.349	ENSACAG00000009351	UTP15	99	70.349	Anolis_carolinensis
ENSMUSG00000041747	Utp15	97	90.272	ENSANAG00000033884	UTP15	99	90.272	Aotus_nancymaae
ENSMUSG00000041747	Utp15	93	66.061	ENSACLG00000010164	utp15	87	66.061	Astatotilapia_calliptera
ENSMUSG00000041747	Utp15	97	57.171	ENSAMXG00000034085	utp15	99	57.171	Astyanax_mexicanus
ENSMUSG00000041747	Utp15	98	89.210	ENSBTAG00000006843	UTP15	100	89.210	Bos_taurus
ENSMUSG00000041747	Utp15	97	90.078	ENSCJAG00000016617	UTP15	99	90.078	Callithrix_jacchus
ENSMUSG00000041747	Utp15	98	86.074	ENSCAFG00000008250	UTP15	100	86.074	Canis_familiaris
ENSMUSG00000041747	Utp15	98	88.975	ENSCAFG00020017037	UTP15	100	88.975	Canis_lupus_dingo
ENSMUSG00000041747	Utp15	99	88.910	ENSCHIG00000016936	UTP15	100	89.210	Capra_hircus
ENSMUSG00000041747	Utp15	97	89.689	ENSTSYG00000008265	UTP15	99	89.689	Carlito_syrichta
ENSMUSG00000041747	Utp15	98	71.401	ENSCAPG00000000279	UTP15	100	71.401	Cavia_aperea
ENSMUSG00000041747	Utp15	98	90.716	ENSCPOG00000006669	UTP15	100	90.716	Cavia_porcellus
ENSMUSG00000041747	Utp15	97	90.078	ENSCCAG00000033397	UTP15	99	90.078	Cebus_capucinus
ENSMUSG00000041747	Utp15	97	89.689	ENSCATG00000008006	UTP15	99	89.689	Cercocebus_atys
ENSMUSG00000041747	Utp15	98	90.135	ENSCLAG00000016531	UTP15	100	90.135	Chinchilla_lanigera
ENSMUSG00000041747	Utp15	97	90.078	ENSCSAG00000015499	UTP15	99	90.078	Chlorocebus_sabaeus
ENSMUSG00000041747	Utp15	69	88.502	ENSCHOG00000013907	UTP15	71	88.502	Choloepus_hoffmanni
ENSMUSG00000041747	Utp15	98	72.692	ENSCPBG00000000540	UTP15	100	72.692	Chrysemys_picta_bellii
ENSMUSG00000041747	Utp15	94	45.491	ENSCING00000005314	-	99	45.491	Ciona_intestinalis
ENSMUSG00000041747	Utp15	97	89.883	ENSCANG00000034698	UTP15	99	89.883	Colobus_angolensis_palliatus
ENSMUSG00000041747	Utp15	100	93.371	ENSCGRG00001013836	Utp15	100	93.371	Cricetulus_griseus_chok1gshd
ENSMUSG00000041747	Utp15	100	93.371	ENSCGRG00000002234	Utp15	100	93.371	Cricetulus_griseus_crigri
ENSMUSG00000041747	Utp15	93	66.465	ENSCSEG00000019924	utp15	94	66.465	Cynoglossus_semilaevis
ENSMUSG00000041747	Utp15	93	66.869	ENSCVAG00000019484	utp15	94	66.869	Cyprinodon_variegatus
ENSMUSG00000041747	Utp15	94	58.669	ENSDARG00000002720	utp15	96	58.669	Danio_rerio
ENSMUSG00000041747	Utp15	96	89.505	ENSDNOG00000043156	UTP15	97	89.505	Dasypus_novemcinctus
ENSMUSG00000041747	Utp15	97	89.494	ENSDORG00000004399	Utp15	99	89.494	Dipodomys_ordii
ENSMUSG00000041747	Utp15	93	38.200	FBgn0023527	CG3071	93	38.200	Drosophila_melanogaster
ENSMUSG00000041747	Utp15	93	81.098	ENSETEG00000013977	UTP15	96	80.561	Echinops_telfairi
ENSMUSG00000041747	Utp15	73	47.328	ENSEBUG00000001632	utp15	87	47.328	Eptatretus_burgeri
ENSMUSG00000041747	Utp15	97	90.856	ENSEASG00005018111	UTP15	99	90.856	Equus_asinus_asinus
ENSMUSG00000041747	Utp15	97	90.856	ENSECAG00000019428	UTP15	99	90.856	Equus_caballus
ENSMUSG00000041747	Utp15	89	78.390	ENSEEUG00000010048	UTP15	98	78.390	Erinaceus_europaeus
ENSMUSG00000041747	Utp15	95	66.008	ENSELUG00000004259	utp15	96	66.008	Esox_lucius
ENSMUSG00000041747	Utp15	97	89.689	ENSFCAG00000026085	UTP15	99	89.689	Felis_catus
ENSMUSG00000041747	Utp15	94	68.548	ENSFALG00000010206	UTP15	87	68.548	Ficedula_albicollis
ENSMUSG00000041747	Utp15	98	88.975	ENSFDAG00000006305	UTP15	100	88.975	Fukomys_damarensis
ENSMUSG00000041747	Utp15	93	66.263	ENSFHEG00000006935	utp15	94	66.263	Fundulus_heteroclitus
ENSMUSG00000041747	Utp15	93	63.765	ENSGMOG00000007251	utp15	96	63.765	Gadus_morhua
ENSMUSG00000041747	Utp15	99	68.000	ENSGALG00000013510	UTP15	99	68.000	Gallus_gallus
ENSMUSG00000041747	Utp15	93	65.253	ENSGAFG00000017377	utp15	94	65.253	Gambusia_affinis
ENSMUSG00000041747	Utp15	95	62.451	ENSGACG00000004300	utp15	97	61.479	Gasterosteus_aculeatus
ENSMUSG00000041747	Utp15	96	72.079	ENSGAGG00000006599	UTP15	99	73.991	Gopherus_agassizii
ENSMUSG00000041747	Utp15	97	89.883	ENSGGOG00000003301	UTP15	99	89.883	Gorilla_gorilla
ENSMUSG00000041747	Utp15	93	66.061	ENSHBUG00000000370	utp15	94	66.061	Haplochromis_burtoni
ENSMUSG00000041747	Utp15	98	72.727	ENSHGLG00000000745	UTP15	98	76.983	Heterocephalus_glaber_female
ENSMUSG00000041747	Utp15	98	89.749	ENSHGLG00100005426	UTP15	100	89.749	Heterocephalus_glaber_male
ENSMUSG00000041747	Utp15	93	66.397	ENSHCOG00000006823	utp15	94	66.397	Hippocampus_comes
ENSMUSG00000041747	Utp15	96	57.451	ENSIPUG00000004917	utp15	98	57.451	Ictalurus_punctatus
ENSMUSG00000041747	Utp15	99	88.994	ENSSTOG00000027733	UTP15	99	88.994	Ictidomys_tridecemlineatus
ENSMUSG00000041747	Utp15	97	73.735	ENSJJAG00000000395	-	99	73.735	Jaculus_jaculus
ENSMUSG00000041747	Utp15	97	75.097	ENSJJAG00000013122	-	99	75.875	Jaculus_jaculus
ENSMUSG00000041747	Utp15	93	66.263	ENSKMAG00000004713	utp15	94	66.263	Kryptolebias_marmoratus
ENSMUSG00000041747	Utp15	93	68.081	ENSLBEG00000024186	utp15	94	68.081	Labrus_bergylta
ENSMUSG00000041747	Utp15	95	73.861	ENSLACG00000003219	UTP15	96	73.861	Latimeria_chalumnae
ENSMUSG00000041747	Utp15	95	70.717	ENSLOCG00000011049	utp15	99	70.717	Lepisosteus_oculatus
ENSMUSG00000041747	Utp15	100	86.174	ENSLAFG00000002596	UTP15	100	86.174	Loxodonta_africana
ENSMUSG00000041747	Utp15	97	90.078	ENSMFAG00000031908	UTP15	99	90.078	Macaca_fascicularis
ENSMUSG00000041747	Utp15	97	90.078	ENSMMUG00000023514	UTP15	99	90.078	Macaca_mulatta
ENSMUSG00000041747	Utp15	97	89.883	ENSMNEG00000032169	UTP15	99	89.883	Macaca_nemestrina
ENSMUSG00000041747	Utp15	97	89.883	ENSMLEG00000038816	UTP15	99	89.883	Mandrillus_leucophaeus
ENSMUSG00000041747	Utp15	93	68.081	ENSMAMG00000013321	utp15	94	68.081	Mastacembelus_armatus
ENSMUSG00000041747	Utp15	93	66.061	ENSMZEG00005010536	utp15	94	66.061	Maylandia_zebra
ENSMUSG00000041747	Utp15	77	63.951	ENSMGAG00000001937	UTP15	99	63.951	Meleagris_gallopavo
ENSMUSG00000041747	Utp15	100	92.992	ENSMAUG00000018838	Utp15	100	92.992	Mesocricetus_auratus
ENSMUSG00000041747	Utp15	97	77.955	ENSMICG00000037267	-	99	70.874	Microcebus_murinus
ENSMUSG00000041747	Utp15	98	88.996	ENSMICG00000011813	-	100	88.996	Microcebus_murinus
ENSMUSG00000041747	Utp15	100	91.682	ENSMOCG00000000493	Utp15	100	91.682	Microtus_ochrogaster
ENSMUSG00000041747	Utp15	93	67.677	ENSMMOG00000012931	utp15	94	67.677	Mola_mola
ENSMUSG00000041747	Utp15	90	80.127	ENSMODG00000001789	UTP15	92	80.127	Monodelphis_domestica
ENSMUSG00000041747	Utp15	93	68.081	ENSMALG00000021353	utp15	94	68.485	Monopterus_albus
ENSMUSG00000041747	Utp15	100	97.159	MGP_CAROLIEiJ_G0018818	Utp15	100	97.159	Mus_caroli
ENSMUSG00000041747	Utp15	100	96.402	MGP_PahariEiJ_G0015893	Utp15	100	96.402	Mus_pahari
ENSMUSG00000041747	Utp15	100	99.621	MGP_SPRETEiJ_G0019700	Utp15	100	99.621	Mus_spretus
ENSMUSG00000041747	Utp15	98	89.768	ENSMPUG00000005850	UTP15	100	89.768	Mustela_putorius_furo
ENSMUSG00000041747	Utp15	98	89.168	ENSMLUG00000008483	UTP15	100	89.168	Myotis_lucifugus
ENSMUSG00000041747	Utp15	98	92.471	ENSNGAG00000022574	Utp15	100	92.471	Nannospalax_galili
ENSMUSG00000041747	Utp15	93	66.667	ENSNBRG00000020654	utp15	94	66.667	Neolamprologus_brichardi
ENSMUSG00000041747	Utp15	96	85.941	ENSNLEG00000004753	UTP15	98	86.546	Nomascus_leucogenys
ENSMUSG00000041747	Utp15	95	73.904	ENSMEUG00000002833	UTP15	97	73.904	Notamacropus_eugenii
ENSMUSG00000041747	Utp15	98	87.066	ENSOPRG00000012979	UTP15	100	87.066	Ochotona_princeps
ENSMUSG00000041747	Utp15	98	90.909	ENSODEG00000001962	UTP15	99	90.909	Octodon_degus
ENSMUSG00000041747	Utp15	93	67.071	ENSONIG00000014323	utp15	94	67.071	Oreochromis_niloticus
ENSMUSG00000041747	Utp15	84	73.708	ENSOANG00000008695	UTP15	98	73.708	Ornithorhynchus_anatinus
ENSMUSG00000041747	Utp15	98	89.189	ENSOCUG00000000617	UTP15	100	89.189	Oryctolagus_cuniculus
ENSMUSG00000041747	Utp15	93	66.465	ENSORLG00000002095	utp15	94	66.465	Oryzias_latipes
ENSMUSG00000041747	Utp15	93	66.465	ENSORLG00020006632	utp15	94	66.465	Oryzias_latipes_hni
ENSMUSG00000041747	Utp15	93	66.061	ENSORLG00015016375	utp15	94	66.061	Oryzias_latipes_hsok
ENSMUSG00000041747	Utp15	93	66.061	ENSOMEG00000016645	utp15	94	66.061	Oryzias_melastigma
ENSMUSG00000041747	Utp15	97	89.105	ENSOGAG00000000388	UTP15	99	89.105	Otolemur_garnettii
ENSMUSG00000041747	Utp15	98	89.423	ENSOARG00000004869	UTP15	100	89.423	Ovis_aries
ENSMUSG00000041747	Utp15	97	87.743	ENSPPAG00000031829	UTP15	99	87.743	Pan_paniscus
ENSMUSG00000041747	Utp15	97	89.689	ENSPPRG00000003745	UTP15	99	89.689	Panthera_pardus
ENSMUSG00000041747	Utp15	97	88.521	ENSPTIG00000014484	UTP15	99	88.521	Panthera_tigris_altaica
ENSMUSG00000041747	Utp15	97	90.467	ENSPTRG00000016982	UTP15	99	90.467	Pan_troglodytes
ENSMUSG00000041747	Utp15	97	89.689	ENSPANG00000009302	UTP15	99	89.689	Papio_anubis
ENSMUSG00000041747	Utp15	94	68.612	ENSPKIG00000019386	utp15	94	68.612	Paramormyrops_kingsleyae
ENSMUSG00000041747	Utp15	94	74.545	ENSPSIG00000014028	UTP15	95	74.545	Pelodiscus_sinensis
ENSMUSG00000041747	Utp15	93	64.777	ENSPMGG00000013060	utp15	93	64.777	Periophthalmus_magnuspinnatus
ENSMUSG00000041747	Utp15	100	93.750	ENSPEMG00000012771	Utp15	100	93.750	Peromyscus_maniculatus_bairdii
ENSMUSG00000041747	Utp15	94	46.705	ENSPMAG00000001546	utp15	99	46.067	Petromyzon_marinus
ENSMUSG00000041747	Utp15	94	80.769	ENSPCIG00000027448	UTP15	97	80.769	Phascolarctos_cinereus
ENSMUSG00000041747	Utp15	94	63.889	ENSPFOG00000014446	utp15	94	63.889	Poecilia_formosa
ENSMUSG00000041747	Utp15	94	64.471	ENSPLAG00000014623	utp15	95	64.471	Poecilia_latipinna
ENSMUSG00000041747	Utp15	94	64.072	ENSPMEG00000020067	utp15	94	64.072	Poecilia_mexicana
ENSMUSG00000041747	Utp15	94	64.072	ENSPREG00000010394	utp15	95	64.072	Poecilia_reticulata
ENSMUSG00000041747	Utp15	97	89.494	ENSPPYG00000015550	UTP15	99	89.494	Pongo_abelii
ENSMUSG00000041747	Utp15	98	78.958	ENSPCAG00000012880	UTP15	100	78.958	Procavia_capensis
ENSMUSG00000041747	Utp15	97	79.572	ENSPVAG00000007162	UTP15	99	79.572	Pteropus_vampyrus
ENSMUSG00000041747	Utp15	93	66.061	ENSPNYG00000007278	utp15	94	66.061	Pundamilia_nyererei
ENSMUSG00000041747	Utp15	94	58.551	ENSPNAG00000025612	utp15	96	58.551	Pygocentrus_nattereri
ENSMUSG00000041747	Utp15	100	95.265	ENSRNOG00000016591	Utp15	100	95.265	Rattus_norvegicus
ENSMUSG00000041747	Utp15	97	82.490	ENSRBIG00000031078	UTP15	99	84.568	Rhinopithecus_bieti
ENSMUSG00000041747	Utp15	97	89.689	ENSRROG00000034462	UTP15	99	89.689	Rhinopithecus_roxellana
ENSMUSG00000041747	Utp15	93	30.309	YMR093W	-	99	30.309	Saccharomyces_cerevisiae
ENSMUSG00000041747	Utp15	97	90.467	ENSSBOG00000035374	UTP15	99	90.467	Saimiri_boliviensis_boliviensis
ENSMUSG00000041747	Utp15	98	78.682	ENSSHAG00000013388	UTP15	99	78.682	Sarcophilus_harrisii
ENSMUSG00000041747	Utp15	94	68.209	ENSSFOG00015015712	utp15	94	68.209	Scleropages_formosus
ENSMUSG00000041747	Utp15	93	68.081	ENSSMAG00000007133	utp15	94	68.081	Scophthalmus_maximus
ENSMUSG00000041747	Utp15	93	68.687	ENSSDUG00000022792	utp15	94	68.687	Seriola_dumerili
ENSMUSG00000041747	Utp15	93	69.293	ENSSLDG00000003254	utp15	94	69.293	Seriola_lalandi_dorsalis
ENSMUSG00000041747	Utp15	60	87.975	ENSSARG00000011860	UTP15	94	87.975	Sorex_araneus
ENSMUSG00000041747	Utp15	91	72.671	ENSSPUG00000000063	UTP15	99	72.671	Sphenodon_punctatus
ENSMUSG00000041747	Utp15	93	66.465	ENSSPAG00000008124	utp15	94	66.465	Stegastes_partitus
ENSMUSG00000041747	Utp15	97	89.105	ENSSSCG00000014068	UTP15	99	89.105	Sus_scrofa
ENSMUSG00000041747	Utp15	99	66.034	ENSTGUG00000005903	UTP15	99	66.034	Taeniopygia_guttata
ENSMUSG00000041747	Utp15	93	65.657	ENSTRUG00000020924	utp15	96	65.657	Takifugu_rubripes
ENSMUSG00000041747	Utp15	93	66.061	ENSTNIG00000015387	utp15	96	66.061	Tetraodon_nigroviridis
ENSMUSG00000041747	Utp15	92	89.669	ENSTBEG00000009170	UTP15	99	89.669	Tupaia_belangeri
ENSMUSG00000041747	Utp15	98	88.825	ENSTTRG00000007294	UTP15	100	88.825	Tursiops_truncatus
ENSMUSG00000041747	Utp15	97	89.883	ENSUAMG00000019538	UTP15	99	91.803	Ursus_americanus
ENSMUSG00000041747	Utp15	97	90.078	ENSUMAG00000007568	UTP15	99	90.078	Ursus_maritimus
ENSMUSG00000041747	Utp15	96	89.505	ENSVPAG00000009611	UTP15	97	89.505	Vicugna_pacos
ENSMUSG00000041747	Utp15	98	88.781	ENSVVUG00000007505	UTP15	100	88.781	Vulpes_vulpes
ENSMUSG00000041747	Utp15	96	68.701	ENSXETG00000016821	utp15	99	68.701	Xenopus_tropicalis
ENSMUSG00000041747	Utp15	94	64.870	ENSXCOG00000001529	utp15	95	64.870	Xiphophorus_couchianus
ENSMUSG00000041747	Utp15	94	65.070	ENSXMAG00000014206	utp15	95	65.070	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001650	fibrillar center	-	ISO	Component
GO:0005634	nucleus	-	IEA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005783	endoplasmic reticulum	-	ISO	Component
GO:0006364	rRNA processing	-	IEA	Process
GO:0042254	ribosome biogenesis	-	IEA	Process
GO:0045943	positive regulation of transcription by RNA polymerase I	-	ISO	Process
GO:2000234	positive regulation of rRNA processing	-	ISO	Process