EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000141234	-	747	-	-	- (aa)	-	-
ENSMUST00000152169	-	535	-	-	- (aa)	-	-
ENSMUST00000077340	-	2288	-	ENSMUSP00000076564	650 (aa)	-	Q8VCT3
ENSMUST00000074357	-	2171	-	ENSMUSP00000073962	611 (aa)	-	E9PYF1
ENSMUST00000190632	-	1577	-	-	- (aa)	-	-
ENSMUST00000141092	-	785	-	-	- (aa)	-	-
ENSMUST00000189615	-	2275	-	-	- (aa)	-	-
ENSMUST00000188053	-	574	-	-	- (aa)	-	-
ENSMUST00000130069	-	475	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000041926	Rnpep	100	88.615	ENSG00000176393	RNPEP	95	94.172	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004177	aminopeptidase activity	-	ISO	Function
GO:0005507	copper ion binding	-	ISO	Function
GO:0005576	extracellular region	21873635.	IBA	Component
GO:0005576	extracellular region	-	ISO	Component
GO:0005615	extracellular space	-	ISO	Component
GO:0005794	Golgi apparatus	-	ISO	Component
GO:0005886	plasma membrane	21873635.	IBA	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0006508	proteolysis	-	ISO	Process
GO:0008233	peptidase activity	-	IEA	Function
GO:0008237	metallopeptidase activity	-	IEA	Function
GO:0008270	zinc ion binding	-	ISO	Function
GO:0009897	external side of plasma membrane	-	ISO	Component
GO:0016787	hydrolase activity	-	IEA	Function
GO:0030141	secretory granule	21873635.	IBA	Component
GO:0030141	secretory granule	-	ISO	Component
GO:0042277	peptide binding	-	ISO	Function
GO:0043005	neuron projection	-	ISO	Component
GO:0045776	negative regulation of blood pressure	21873635.	IBA	Process
GO:0045776	negative regulation of blood pressure	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0050897	cobalt ion binding	-	ISO	Function
GO:0070006	metalloaminopeptidase activity	-	ISO	Function