EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000041957 (Gene tree)
Gene ID: 67451
Gene Symbol: Pkp2
Alias: 1200008D14Rik|1200012P04Rik|Pkp2l
Full Name: plakophilin 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 59395
Position: chr16: 16213318-16272712
Accession: 1914701
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000162150	-	1959	-	-	- (aa)	-	-
ENSMUST00000039408	-	2918	-	ENSMUSP00000036890	795 (aa)	-	Q9CQ73
ENSMUST00000161342	-	2931	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000041957's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu05412	Arrhythmogenic right ventricular cardiomyopathy (ARVC)	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000041957's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000041957	Pkp2	100	78.495	ENSG00000057294	PKP2	100	78.375	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002159	desmosome assembly	-	ISO	Process
GO:0005080	protein kinase C binding	21873635.	IBA	Function
GO:0005080	protein kinase C binding	-	ISO	Function
GO:0005515	protein binding	17535849.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005882	intermediate filament	21873635.	IBA	Component
GO:0005882	intermediate filament	16917092.	IDA	Component
GO:0005886	plasma membrane	21873635.	IBA	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0005911	cell-cell junction	21873635.	IBA	Component
GO:0005911	cell-cell junction	21296051.	IDA	Component
GO:0005912	adherens junction	15479741.	IMP	Component
GO:0005912	adherens junction	-	ISO	Component
GO:0005913	cell-cell adherens junction	21873635.	IBA	Component
GO:0007043	cell-cell junction assembly	21873635.	IBA	Process
GO:0007507	heart development	21873635.	IBA	Process
GO:0007507	heart development	15479741.	IMP	Process
GO:0008285	negative regulation of cell proliferation	-	ISO	Process
GO:0014704	intercalated disc	21873635.	IBA	Component
GO:0014704	intercalated disc	17535849.	IDA	Component
GO:0014704	intercalated disc	-	ISO	Component
GO:0016264	gap junction assembly	-	ISO	Process
GO:0019215	intermediate filament binding	21873635.	IBA	Function
GO:0019215	intermediate filament binding	-	ISO	Function
GO:0030054	cell junction	-	ISO	Component
GO:0030057	desmosome	9864371.22274697.	IDA	Component
GO:0030336	negative regulation of cell migration	-	ISO	Process
GO:0034334	adherens junction maintenance	21873635.	IBA	Process
GO:0034334	adherens junction maintenance	-	ISO	Process
GO:0045110	intermediate filament bundle assembly	21873635.	IBA	Process
GO:0045110	intermediate filament bundle assembly	-	ISO	Process
GO:0045294	alpha-catenin binding	21873635.	IBA	Function
GO:0045294	alpha-catenin binding	-	ISO	Function
GO:0045296	cadherin binding	21873635.	IBA	Function
GO:0048496	maintenance of animal organ identity	-	ISO	Process
GO:0055010	ventricular cardiac muscle tissue morphogenesis	-	ISO	Process
GO:0055088	lipid homeostasis	-	ISO	Process
GO:0060090	molecular adaptor activity	21873635.	IBA	Function
GO:0060090	molecular adaptor activity	-	ISO	Function
GO:0072659	protein localization to plasma membrane	21873635.	IBA	Process
GO:0072659	protein localization to plasma membrane	-	ISO	Process
GO:0086001	cardiac muscle cell action potential	-	ISO	Process
GO:0086002	cardiac muscle cell action potential involved in contraction	-	ISO	Process
GO:0086005	ventricular cardiac muscle cell action potential	-	ISO	Process
GO:0086019	cell-cell signaling involved in cardiac conduction	21873635.	IBA	Process
GO:0086019	cell-cell signaling involved in cardiac conduction	-	ISO	Process
GO:0086073	bundle of His cell-Purkinje myocyte adhesion involved in cell communication	-	ISO	Process
GO:0086091	regulation of heart rate by cardiac conduction	-	ISO	Process
GO:0098609	cell-cell adhesion	21873635.	IBA	Process
GO:0098609	cell-cell adhesion	15479741.	IMP	Process
GO:0098911	regulation of ventricular cardiac muscle cell action potential	-	ISO	Process
GO:2000810	regulation of bicellular tight junction assembly	-	ISO	Process