EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000042185 (Gene tree)
Gene ID: 235134
Gene Symbol: Nfrkb
Alias: A530090G11Rik
Full Name: nuclear factor related to kappa B binding protein
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 35142
Position: chr9: 31386192-31421333
Accession: 2442410
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000150179	-	669	-	-	- (aa)	-	-
ENSMUST00000132329	-	5398	-	ENSMUSP00000116404	215 (aa)	-	D6RHP5
ENSMUST00000131540	-	645	-	ENSMUSP00000119622	114 (aa)	-	D6RIN8
ENSMUST00000143558	-	819	-	-	- (aa)	-	-
ENSMUST00000134528	-	3295	-	-	- (aa)	-	-
ENSMUST00000086167	-	5161	XM_006510218	ENSMUSP00000083341	1296 (aa)	XP_006510281	Q6PIJ4
ENSMUST00000215211	-	1338	-	ENSMUSP00000149841	324 (aa)	-	A0A1L1SSC9
ENSMUST00000215544	-	3048	-	-	- (aa)	-	-
ENSMUST00000128375	-	4808	-	-	- (aa)	-	-
ENSMUST00000152593	-	5208	-	ENSMUSP00000119025	258 (aa)	-	D6RD05

Gene Model

Click here to download ENSMUSG00000042185's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000042185's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002020	protease binding	21873635.	IBA	Function
GO:0002020	protease binding	-	ISO	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0006281	DNA repair	-	IEA	Process
GO:0006310	DNA recombination	-	IEA	Process
GO:0006974	cellular response to DNA damage stimulus	-	IEA	Process
GO:0008150	biological_process	-	ND	Process
GO:0031011	Ino80 complex	21873635.	IBA	Component
GO:0031011	Ino80 complex	-	ISO	Component
GO:0031011	Ino80 complex	-	ISO	Component