EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000042369 (Gene tree)
Gene ID: 241490
Gene Symbol: Rbm45
Alias: Drb1|Drbp1|G430095G15Rik
Full Name: RNA binding motif protein 45
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 13785 bases
Position: chr2:76369984-76383768
Accession: 2387367
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000040420	RRM_5	PF13893.6	1.9e-06	1	1
ENSMUSP00000040420	RRM_1	PF00076.22	2.2e-48	1	4
ENSMUSP00000040420	RRM_1	PF00076.22	2.2e-48	2	4
ENSMUSP00000040420	RRM_1	PF00076.22	2.2e-48	3	4
ENSMUSP00000040420	RRM_1	PF00076.22	2.2e-48	4	4

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000046389	-	1898	-	ENSMUSP00000040420	476 (aa)	-	Q8BHN5

Gene Model

Click here to download ENSMUSG00000042369's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000042369's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000042369	Rbm45	100	90.546	ENSG00000155636	RBM45	100	90.546	Homo_sapiens
ENSMUSG00000042369	Rbm45	97	57.234	ENSAPOG00000009219	rbm45	98	57.356	Acanthochromis_polyacanthus
ENSMUSG00000042369	Rbm45	100	90.336	ENSAMEG00000000896	RBM45	100	90.336	Ailuropoda_melanoleuca
ENSMUSG00000042369	Rbm45	96	57.543	ENSACIG00000009234	rbm45	98	57.543	Amphilophus_citrinellus
ENSMUSG00000042369	Rbm45	97	56.780	ENSAOCG00000007638	rbm45	98	56.716	Amphiprion_ocellaris
ENSMUSG00000042369	Rbm45	97	57.021	ENSAPEG00000014352	rbm45	98	57.143	Amphiprion_percula
ENSMUSG00000042369	Rbm45	97	57.759	ENSATEG00000016948	rbm45	98	57.759	Anabas_testudineus
ENSMUSG00000042369	Rbm45	95	70.604	ENSAPLG00000011049	RBM45	100	70.604	Anas_platyrhynchos
ENSMUSG00000042369	Rbm45	100	89.916	ENSANAG00000034660	RBM45	100	89.916	Aotus_nancymaae
ENSMUSG00000042369	Rbm45	96	59.348	ENSACLG00000027286	rbm45	98	59.348	Astatotilapia_calliptera
ENSMUSG00000042369	Rbm45	96	58.405	ENSACLG00000027201	-	98	58.710	Astatotilapia_calliptera
ENSMUSG00000042369	Rbm45	96	62.338	ENSAMXG00000007463	rbm45	98	62.338	Astyanax_mexicanus
ENSMUSG00000042369	Rbm45	100	88.655	ENSBTAG00000006168	RBM45	100	88.655	Bos_taurus
ENSMUSG00000042369	Rbm45	100	85.000	ENSCJAG00000021516	RBM45	100	85.000	Callithrix_jacchus
ENSMUSG00000042369	Rbm45	100	89.167	ENSCAFG00000013640	RBM45	100	89.167	Canis_familiaris
ENSMUSG00000042369	Rbm45	100	89.706	ENSCAFG00020007013	RBM45	100	89.706	Canis_lupus_dingo
ENSMUSG00000042369	Rbm45	100	89.076	ENSCHIG00000010687	RBM45	100	89.076	Capra_hircus
ENSMUSG00000042369	Rbm45	100	89.916	ENSTSYG00000007757	RBM45	100	89.916	Carlito_syrichta
ENSMUSG00000042369	Rbm45	91	79.841	ENSCAPG00000009388	RBM45	93	79.112	Cavia_aperea
ENSMUSG00000042369	Rbm45	100	87.500	ENSCPOG00000000684	RBM45	97	89.009	Cavia_porcellus
ENSMUSG00000042369	Rbm45	100	90.126	ENSCCAG00000022783	RBM45	100	90.126	Cebus_capucinus
ENSMUSG00000042369	Rbm45	100	90.546	ENSCATG00000041082	RBM45	100	90.546	Cercocebus_atys
ENSMUSG00000042369	Rbm45	97	83.498	ENSCLAG00000015215	RBM45	96	83.498	Chinchilla_lanigera
ENSMUSG00000042369	Rbm45	100	90.126	ENSCSAG00000014231	RBM45	100	90.126	Chlorocebus_sabaeus
ENSMUSG00000042369	Rbm45	95	89.628	ENSCHOG00000009809	RBM45	100	89.628	Choloepus_hoffmanni
ENSMUSG00000042369	Rbm45	98	70.763	ENSCPBG00000003246	RBM45	99	70.701	Chrysemys_picta_bellii
ENSMUSG00000042369	Rbm45	100	90.126	ENSCANG00000040777	RBM45	100	90.126	Colobus_angolensis_palliatus
ENSMUSG00000042369	Rbm45	100	91.824	ENSCGRG00001005759	Rbm45	100	91.824	Cricetulus_griseus_chok1gshd
ENSMUSG00000042369	Rbm45	100	91.824	ENSCGRG00000010816	Rbm45	100	91.824	Cricetulus_griseus_crigri
ENSMUSG00000042369	Rbm45	97	52.790	ENSCSEG00000017409	rbm45	98	52.790	Cynoglossus_semilaevis
ENSMUSG00000042369	Rbm45	96	56.371	ENSCVAG00000016127	rbm45	99	56.371	Cyprinodon_variegatus
ENSMUSG00000042369	Rbm45	96	60.907	ENSDARG00000063731	rbm45	99	61.257	Danio_rerio
ENSMUSG00000042369	Rbm45	100	87.421	ENSDNOG00000001973	RBM45	100	88.050	Dasypus_novemcinctus
ENSMUSG00000042369	Rbm45	100	87.815	ENSDORG00000015831	Rbm45	100	87.815	Dipodomys_ordii
ENSMUSG00000042369	Rbm45	93	36.659	FBgn0035526	CG1316	91	36.774	Drosophila_melanogaster
ENSMUSG00000042369	Rbm45	100	80.126	ENSETEG00000013424	RBM45	100	80.126	Echinops_telfairi
ENSMUSG00000042369	Rbm45	98	47.436	ENSEBUG00000007042	rbm45	97	47.939	Eptatretus_burgeri
ENSMUSG00000042369	Rbm45	100	89.706	ENSEASG00005022475	RBM45	100	89.706	Equus_asinus_asinus
ENSMUSG00000042369	Rbm45	100	89.706	ENSECAG00000017129	RBM45	100	89.706	Equus_caballus
ENSMUSG00000042369	Rbm45	52	89.157	ENSEEUG00000001843	RBM45	100	89.157	Erinaceus_europaeus
ENSMUSG00000042369	Rbm45	98	57.996	ENSELUG00000023238	rbm45	99	58.120	Esox_lucius
ENSMUSG00000042369	Rbm45	96	60.776	ENSELUG00000020878	-	98	60.776	Esox_lucius
ENSMUSG00000042369	Rbm45	100	89.706	ENSFCAG00000018793	RBM45	100	89.706	Felis_catus
ENSMUSG00000042369	Rbm45	93	67.979	ENSFALG00000003330	RBM45	100	67.979	Ficedula_albicollis
ENSMUSG00000042369	Rbm45	97	88.172	ENSFDAG00000006840	-	97	88.817	Fukomys_damarensis
ENSMUSG00000042369	Rbm45	95	55.291	ENSFHEG00000012844	rbm45	85	55.291	Fundulus_heteroclitus
ENSMUSG00000042369	Rbm45	97	57.019	ENSGMOG00000002427	rbm45	98	57.019	Gadus_morhua
ENSMUSG00000042369	Rbm45	98	68.856	ENSGALG00000009202	RBM45	92	68.870	Gallus_gallus
ENSMUSG00000042369	Rbm45	96	57.792	ENSGAFG00000003709	rbm45	98	57.792	Gambusia_affinis
ENSMUSG00000042369	Rbm45	96	54.936	ENSGACG00000011659	rbm45	100	55.150	Gasterosteus_aculeatus
ENSMUSG00000042369	Rbm45	84	68.949	ENSGAGG00000017616	RBM45	98	69.533	Gopherus_agassizii
ENSMUSG00000042369	Rbm45	100	89.916	ENSGGOG00000013981	RBM45	100	89.916	Gorilla_gorilla
ENSMUSG00000042369	Rbm45	96	58.190	ENSHBUG00000015980	rbm45	98	58.495	Haplochromis_burtoni
ENSMUSG00000042369	Rbm45	97	89.009	ENSHGLG00000007342	RBM45	97	89.009	Heterocephalus_glaber_female
ENSMUSG00000042369	Rbm45	95	87.613	ENSHGLG00100011482	-	99	87.613	Heterocephalus_glaber_male
ENSMUSG00000042369	Rbm45	97	59.914	ENSHGLG00100007533	-	96	59.914	Heterocephalus_glaber_male
ENSMUSG00000042369	Rbm45	97	58.038	ENSHCOG00000000850	rbm45	98	58.038	Hippocampus_comes
ENSMUSG00000042369	Rbm45	96	61.771	ENSIPUG00000019576	RBM45	98	61.771	Ictalurus_punctatus
ENSMUSG00000042369	Rbm45	100	89.496	ENSSTOG00000002708	RBM45	100	89.496	Ictidomys_tridecemlineatus
ENSMUSG00000042369	Rbm45	87	87.136	ENSJJAG00000001312	Rbm45	96	83.527	Jaculus_jaculus
ENSMUSG00000042369	Rbm45	96	55.650	ENSKMAG00000007636	rbm45	98	56.624	Kryptolebias_marmoratus
ENSMUSG00000042369	Rbm45	95	57.860	ENSLBEG00000002556	-	99	57.860	Labrus_bergylta
ENSMUSG00000042369	Rbm45	96	57.974	ENSLBEG00000011642	rbm45	99	57.974	Labrus_bergylta
ENSMUSG00000042369	Rbm45	97	67.364	ENSLACG00000003728	RBM45	99	67.364	Latimeria_chalumnae
ENSMUSG00000042369	Rbm45	97	62.687	ENSLOCG00000006862	rbm45	99	62.687	Lepisosteus_oculatus
ENSMUSG00000042369	Rbm45	95	87.918	ENSLAFG00000007464	RBM45	100	87.918	Loxodonta_africana
ENSMUSG00000042369	Rbm45	100	90.126	ENSMFAG00000042524	RBM45	100	90.126	Macaca_fascicularis
ENSMUSG00000042369	Rbm45	100	90.126	ENSMMUG00000002013	RBM45	100	90.126	Macaca_mulatta
ENSMUSG00000042369	Rbm45	100	90.126	ENSMNEG00000029136	RBM45	100	90.126	Macaca_nemestrina
ENSMUSG00000042369	Rbm45	100	90.126	ENSMLEG00000042404	RBM45	100	90.126	Mandrillus_leucophaeus
ENSMUSG00000042369	Rbm45	97	57.634	ENSMAMG00000022413	rbm45	99	57.634	Mastacembelus_armatus
ENSMUSG00000042369	Rbm45	96	58.405	ENSMZEG00005027295	rbm45	98	58.710	Maylandia_zebra
ENSMUSG00000042369	Rbm45	92	68.947	ENSMGAG00000009496	RBM45	100	68.947	Meleagris_gallopavo
ENSMUSG00000042369	Rbm45	100	91.824	ENSMAUG00000016948	Rbm45	100	91.824	Mesocricetus_auratus
ENSMUSG00000042369	Rbm45	100	89.286	ENSMICG00000003787	RBM45	100	89.286	Microcebus_murinus
ENSMUSG00000042369	Rbm45	100	90.336	ENSMOCG00000017295	Rbm45	100	90.336	Microtus_ochrogaster
ENSMUSG00000042369	Rbm45	97	58.155	ENSMMOG00000006808	rbm45	99	58.155	Mola_mola
ENSMUSG00000042369	Rbm45	100	86.221	ENSMODG00000009742	RBM45	100	86.221	Monodelphis_domestica
ENSMUSG00000042369	Rbm45	98	57.906	ENSMALG00000022126	rbm45	99	57.952	Monopterus_albus
ENSMUSG00000042369	Rbm45	100	97.479	MGP_CAROLIEiJ_G0023686	Rbm45	100	97.479	Mus_caroli
ENSMUSG00000042369	Rbm45	100	97.479	MGP_PahariEiJ_G0025137	Rbm45	100	97.479	Mus_pahari
ENSMUSG00000042369	Rbm45	100	99.580	MGP_SPRETEiJ_G0024607	Rbm45	100	99.580	Mus_spretus
ENSMUSG00000042369	Rbm45	100	90.126	ENSMPUG00000003205	RBM45	100	90.126	Mustela_putorius_furo
ENSMUSG00000042369	Rbm45	100	74.274	ENSMLUG00000005782	RBM45	100	74.274	Myotis_lucifugus
ENSMUSG00000042369	Rbm45	100	90.546	ENSNGAG00000023886	Rbm45	100	90.546	Nannospalax_galili
ENSMUSG00000042369	Rbm45	96	72.674	ENSNBRG00000008816	rbm45	97	72.674	Neolamprologus_brichardi
ENSMUSG00000042369	Rbm45	100	89.916	ENSNLEG00000006080	RBM45	100	89.916	Nomascus_leucogenys
ENSMUSG00000042369	Rbm45	76	86.413	ENSMEUG00000007995	-	63	86.413	Notamacropus_eugenii
ENSMUSG00000042369	Rbm45	85	88.983	ENSOPRG00000002626	RBM45	85	88.983	Ochotona_princeps
ENSMUSG00000042369	Rbm45	97	88.793	ENSODEG00000007959	RBM45	97	88.793	Octodon_degus
ENSMUSG00000042369	Rbm45	96	58.621	ENSONIG00000001450	rbm45	100	57.684	Oreochromis_niloticus
ENSMUSG00000042369	Rbm45	91	82.105	ENSOANG00000008627	RBM45	100	82.105	Ornithorhynchus_anatinus
ENSMUSG00000042369	Rbm45	100	89.286	ENSOCUG00000001125	RBM45	100	89.286	Oryctolagus_cuniculus
ENSMUSG00000042369	Rbm45	96	59.653	ENSORLG00000024508	rbm45	98	59.653	Oryzias_latipes
ENSMUSG00000042369	Rbm45	99	57.684	ENSOMEG00000015870	rbm45	98	58.785	Oryzias_melastigma
ENSMUSG00000042369	Rbm45	100	88.025	ENSOGAG00000015195	RBM45	100	88.025	Otolemur_garnettii
ENSMUSG00000042369	Rbm45	100	88.235	ENSOARG00000017348	RBM45	100	88.235	Ovis_aries
ENSMUSG00000042369	Rbm45	100	90.546	ENSPPAG00000026278	RBM45	100	90.546	Pan_paniscus
ENSMUSG00000042369	Rbm45	100	89.706	ENSPPRG00000017073	RBM45	100	89.706	Panthera_pardus
ENSMUSG00000042369	Rbm45	100	89.706	ENSPTIG00000021277	RBM45	100	89.706	Panthera_tigris_altaica
ENSMUSG00000042369	Rbm45	100	90.126	ENSPTRG00000012686	RBM45	100	90.126	Pan_troglodytes
ENSMUSG00000042369	Rbm45	100	90.126	ENSPANG00000016088	RBM45	100	90.126	Papio_anubis
ENSMUSG00000042369	Rbm45	97	63.113	ENSPKIG00000000284	rbm45	99	63.113	Paramormyrops_kingsleyae
ENSMUSG00000042369	Rbm45	74	67.514	ENSPSIG00000002884	RBM45	100	67.514	Pelodiscus_sinensis
ENSMUSG00000042369	Rbm45	97	53.145	ENSPMGG00000001551	rbm45	98	53.145	Periophthalmus_magnuspinnatus
ENSMUSG00000042369	Rbm45	100	92.243	ENSPEMG00000002470	Rbm45	100	92.243	Peromyscus_maniculatus_bairdii
ENSMUSG00000042369	Rbm45	96	49.467	ENSPMAG00000002965	rbm45	99	49.467	Petromyzon_marinus
ENSMUSG00000042369	Rbm45	100	86.430	ENSPCIG00000025402	RBM45	100	86.430	Phascolarctos_cinereus
ENSMUSG00000042369	Rbm45	96	57.576	ENSPFOG00000006641	rbm45	98	57.576	Poecilia_formosa
ENSMUSG00000042369	Rbm45	96	57.576	ENSPLAG00000010571	rbm45	98	57.576	Poecilia_latipinna
ENSMUSG00000042369	Rbm45	96	57.576	ENSPMEG00000001067	rbm45	98	57.576	Poecilia_mexicana
ENSMUSG00000042369	Rbm45	96	58.442	ENSPREG00000004579	rbm45	98	58.442	Poecilia_reticulata
ENSMUSG00000042369	Rbm45	100	90.126	ENSPPYG00000012974	RBM45	100	90.126	Pongo_abelii
ENSMUSG00000042369	Rbm45	80	90.678	ENSPCAG00000004338	RBM45	79	90.678	Procavia_capensis
ENSMUSG00000042369	Rbm45	100	89.496	ENSPCOG00000021526	RBM45	100	89.496	Propithecus_coquereli
ENSMUSG00000042369	Rbm45	100	89.286	ENSPVAG00000010390	RBM45	100	89.286	Pteropus_vampyrus
ENSMUSG00000042369	Rbm45	95	54.061	ENSPNYG00000010755	rbm45	100	54.061	Pundamilia_nyererei
ENSMUSG00000042369	Rbm45	96	61.905	ENSPNAG00000021750	rbm45	98	61.905	Pygocentrus_nattereri
ENSMUSG00000042369	Rbm45	100	92.437	ENSRNOG00000010595	Rbm45	100	92.437	Rattus_norvegicus
ENSMUSG00000042369	Rbm45	100	89.916	ENSRBIG00000033680	RBM45	100	89.916	Rhinopithecus_bieti
ENSMUSG00000042369	Rbm45	100	89.916	ENSRROG00000031398	RBM45	100	89.916	Rhinopithecus_roxellana
ENSMUSG00000042369	Rbm45	100	90.126	ENSSBOG00000005469	RBM45	100	90.126	Saimiri_boliviensis_boliviensis
ENSMUSG00000042369	Rbm45	95	86.544	ENSSHAG00000005667	RBM45	100	86.544	Sarcophilus_harrisii
ENSMUSG00000042369	Rbm45	97	62.047	ENSSFOG00015012262	rbm45	99	62.047	Scleropages_formosus
ENSMUSG00000042369	Rbm45	88	55.164	ENSSMAG00000001822	rbm45	94	55.164	Scophthalmus_maximus
ENSMUSG00000042369	Rbm45	97	57.388	ENSSDUG00000014461	rbm45	98	57.388	Seriola_dumerili
ENSMUSG00000042369	Rbm45	97	57.388	ENSSLDG00000017621	rbm45	98	57.388	Seriola_lalandi_dorsalis
ENSMUSG00000042369	Rbm45	97	74.837	ENSSARG00000001516	RBM45	97	74.839	Sorex_araneus
ENSMUSG00000042369	Rbm45	98	62.845	ENSSPUG00000005740	RBM45	91	62.766	Sphenodon_punctatus
ENSMUSG00000042369	Rbm45	97	55.957	ENSSPAG00000023188	rbm45	98	56.077	Stegastes_partitus
ENSMUSG00000042369	Rbm45	100	89.394	ENSSSCG00000015996	RBM45	100	89.394	Sus_scrofa
ENSMUSG00000042369	Rbm45	62	70.435	ENSTGUG00000015654	-	100	70.435	Taeniopygia_guttata
ENSMUSG00000042369	Rbm45	96	68.547	ENSTGUG00000009116	-	93	68.547	Taeniopygia_guttata
ENSMUSG00000042369	Rbm45	97	57.543	ENSTRUG00000005485	rbm45	99	57.543	Takifugu_rubripes
ENSMUSG00000042369	Rbm45	97	54.894	ENSTNIG00000009859	rbm45	98	54.681	Tetraodon_nigroviridis
ENSMUSG00000042369	Rbm45	67	80.233	ENSTBEG00000014236	-	100	80.233	Tupaia_belangeri
ENSMUSG00000042369	Rbm45	100	80.672	ENSTTRG00000007653	RBM45	100	80.672	Tursiops_truncatus
ENSMUSG00000042369	Rbm45	100	90.126	ENSUAMG00000012989	RBM45	100	90.126	Ursus_americanus
ENSMUSG00000042369	Rbm45	96	90.989	ENSUMAG00000016503	RBM45	96	90.989	Ursus_maritimus
ENSMUSG00000042369	Rbm45	72	88.596	ENSVPAG00000001558	RBM45	100	88.596	Vicugna_pacos
ENSMUSG00000042369	Rbm45	100	89.706	ENSVVUG00000010078	RBM45	100	89.706	Vulpes_vulpes
ENSMUSG00000042369	Rbm45	98	65.638	ENSXETG00000015007	rbm45	99	65.631	Xenopus_tropicalis
ENSMUSG00000042369	Rbm45	96	56.304	ENSXCOG00000014247	rbm45	98	56.304	Xiphophorus_couchianus
ENSMUSG00000042369	Rbm45	96	57.792	ENSXMAG00000026302	rbm45	98	57.792	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003723	RNA binding	12220514.	ISO	Function
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	12391198.	ISO	Component
GO:0007275	multicellular organism development	-	IEA	Process
GO:0007399	nervous system development	-	IEA	Process
GO:0008150	biological_process	-	ND	Process
GO:0030154	cell differentiation	-	IEA	Process
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component