EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000042389 (Gene tree)
Gene ID: 381802
Gene Symbol: Tsen2
Alias: -
Full Name: tRNA splicing endonuclease subunit 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 33965 bases
Position: chr6:115544664-115578628
Accession: 2141599
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000038211	tRNA_int_endo	PF01974.17	9.9e-18	1	1
ENSMUSP00000038211	tRNA_int_endo_N	PF02778.14	6e-17	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000040234	-	2106	XM_006506336	ENSMUSP00000038211	460 (aa)	XP_006506399	Q6P7W5
ENSMUST00000143520	-	415	-	-	- (aa)	-	-
ENSMUST00000130425	-	638	-	ENSMUSP00000145431	103 (aa)	-	A0A0N4SW98
ENSMUST00000138200	-	4563	-	-	- (aa)	-	-
ENSMUST00000123359	-	423	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000042389's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000042389's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000042389	Tsen2	100	68.220	ENSG00000154743	TSEN2	99	86.250	Homo_sapiens
ENSMUSG00000042389	Tsen2	64	54.430	ENSAPOG00000019374	-	100	34.382	Acanthochromis_polyacanthus
ENSMUSG00000042389	Tsen2	100	67.086	ENSAMEG00000004748	TSEN2	100	66.876	Ailuropoda_melanoleuca
ENSMUSG00000042389	Tsen2	67	59.302	ENSACIG00000022861	tsen2	99	54.023	Amphilophus_citrinellus
ENSMUSG00000042389	Tsen2	66	56.647	ENSAOCG00000007248	tsen2	73	56.647	Amphiprion_ocellaris
ENSMUSG00000042389	Tsen2	68	60.989	ENSAPEG00000021947	tsen2	77	60.989	Amphiprion_percula
ENSMUSG00000042389	Tsen2	97	39.286	ENSATEG00000009406	tsen2	99	39.957	Anabas_testudineus
ENSMUSG00000042389	Tsen2	87	53.056	ENSAPLG00000014992	TSEN2	100	53.056	Anas_platyrhynchos
ENSMUSG00000042389	Tsen2	98	53.145	ENSACAG00000013345	TSEN2	100	52.954	Anolis_carolinensis
ENSMUSG00000042389	Tsen2	100	67.300	ENSANAG00000026891	TSEN2	100	67.300	Aotus_nancymaae
ENSMUSG00000042389	Tsen2	68	62.088	ENSACLG00000014303	tsen2	76	62.088	Astatotilapia_calliptera
ENSMUSG00000042389	Tsen2	99	43.967	ENSAMXG00000043484	tsen2	99	43.943	Astyanax_mexicanus
ENSMUSG00000042389	Tsen2	100	75.758	ENSBTAG00000037980	TSEN2	89	75.758	Bos_taurus
ENSMUSG00000042389	Tsen2	80	73.585	ENSCJAG00000039013	TSEN2	100	74.545	Callithrix_jacchus
ENSMUSG00000042389	Tsen2	100	66.737	ENSCAFG00000004987	TSEN2	100	66.526	Canis_familiaris
ENSMUSG00000042389	Tsen2	100	66.737	ENSCAFG00020007250	TSEN2	100	66.526	Canis_lupus_dingo
ENSMUSG00000042389	Tsen2	100	66.595	ENSCHIG00000013772	TSEN2	100	66.595	Capra_hircus
ENSMUSG00000042389	Tsen2	100	66.667	ENSTSYG00000010816	TSEN2	100	66.454	Carlito_syrichta
ENSMUSG00000042389	Tsen2	100	63.941	ENSCPOG00000007932	-	100	64.151	Cavia_porcellus
ENSMUSG00000042389	Tsen2	100	67.722	ENSCCAG00000037851	TSEN2	100	67.722	Cebus_capucinus
ENSMUSG00000042389	Tsen2	100	62.208	ENSCATG00000031911	TSEN2	96	84.530	Cercocebus_atys
ENSMUSG00000042389	Tsen2	100	63.522	ENSCLAG00000011090	TSEN2	100	63.312	Chinchilla_lanigera
ENSMUSG00000042389	Tsen2	100	65.171	ENSCSAG00000009822	TSEN2	100	65.171	Chlorocebus_sabaeus
ENSMUSG00000042389	Tsen2	75	81.283	ENSCHOG00000009111	TSEN2	74	81.283	Choloepus_hoffmanni
ENSMUSG00000042389	Tsen2	100	53.209	ENSCPBG00000026359	TSEN2	100	47.826	Chrysemys_picta_bellii
ENSMUSG00000042389	Tsen2	100	68.085	ENSCANG00000035550	TSEN2	100	68.085	Colobus_angolensis_palliatus
ENSMUSG00000042389	Tsen2	100	88.286	ENSCGRG00001017681	Tsen2	100	87.852	Cricetulus_griseus_chok1gshd
ENSMUSG00000042389	Tsen2	100	88.286	ENSCGRG00000010015	Tsen2	100	87.852	Cricetulus_griseus_crigri
ENSMUSG00000042389	Tsen2	99	38.445	ENSCSEG00000020407	tsen2	99	38.445	Cynoglossus_semilaevis
ENSMUSG00000042389	Tsen2	100	67.597	ENSDNOG00000038504	TSEN2	100	67.097	Dasypus_novemcinctus
ENSMUSG00000042389	Tsen2	100	64.069	ENSDORG00000003395	Tsen2	100	64.069	Dipodomys_ordii
ENSMUSG00000042389	Tsen2	69	80.465	ENSETEG00000003098	TSEN2	69	80.930	Echinops_telfairi
ENSMUSG00000042389	Tsen2	69	54.891	ENSEBUG00000014614	TSEN2	80	54.891	Eptatretus_burgeri
ENSMUSG00000042389	Tsen2	100	68.153	ENSEASG00005014763	TSEN2	100	68.153	Equus_asinus_asinus
ENSMUSG00000042389	Tsen2	100	68.365	ENSECAG00000012813	TSEN2	100	68.365	Equus_caballus
ENSMUSG00000042389	Tsen2	100	44.000	ENSELUG00000013262	tsen2	100	44.040	Esox_lucius
ENSMUSG00000042389	Tsen2	100	65.217	ENSFCAG00000025500	TSEN2	100	65.000	Felis_catus
ENSMUSG00000042389	Tsen2	100	55.839	ENSFALG00000000012	TSEN2	100	55.839	Ficedula_albicollis
ENSMUSG00000042389	Tsen2	100	64.783	ENSFDAG00000008132	TSEN2	100	64.783	Fukomys_damarensis
ENSMUSG00000042389	Tsen2	100	53.638	ENSGALG00000004981	TSEN2	100	53.638	Gallus_gallus
ENSMUSG00000042389	Tsen2	60	59.589	ENSGAFG00000019542	tsen2	76	59.589	Gambusia_affinis
ENSMUSG00000042389	Tsen2	71	60.773	ENSGACG00000003387	tsen2	99	39.232	Gasterosteus_aculeatus
ENSMUSG00000042389	Tsen2	100	51.983	ENSGAGG00000022560	TSEN2	100	51.983	Gopherus_agassizii
ENSMUSG00000042389	Tsen2	100	67.797	ENSGGOG00000012488	TSEN2	100	67.797	Gorilla_gorilla
ENSMUSG00000042389	Tsen2	68	62.637	ENSHBUG00000009039	tsen2	76	62.637	Haplochromis_burtoni
ENSMUSG00000042389	Tsen2	100	65.190	ENSHGLG00000000740	TSEN2	100	65.190	Heterocephalus_glaber_female
ENSMUSG00000042389	Tsen2	100	65.190	ENSHGLG00100001532	TSEN2	100	65.190	Heterocephalus_glaber_male
ENSMUSG00000042389	Tsen2	99	43.002	ENSIPUG00000011651	tsen2	99	43.002	Ictalurus_punctatus
ENSMUSG00000042389	Tsen2	100	64.731	ENSSTOG00000000538	TSEN2	100	66.381	Ictidomys_tridecemlineatus
ENSMUSG00000042389	Tsen2	100	44.928	ENSLACG00000008466	TSEN2	100	44.375	Latimeria_chalumnae
ENSMUSG00000042389	Tsen2	100	46.921	ENSLOCG00000013958	tsen2	100	46.921	Lepisosteus_oculatus
ENSMUSG00000042389	Tsen2	100	64.768	ENSLAFG00000009300	TSEN2	100	64.768	Loxodonta_africana
ENSMUSG00000042389	Tsen2	100	68.085	ENSMFAG00000038583	TSEN2	100	68.085	Macaca_fascicularis
ENSMUSG00000042389	Tsen2	100	68.085	ENSMMUG00000007195	TSEN2	100	68.085	Macaca_mulatta
ENSMUSG00000042389	Tsen2	100	67.880	ENSMNEG00000025898	TSEN2	100	67.880	Macaca_nemestrina
ENSMUSG00000042389	Tsen2	100	65.745	ENSMLEG00000038210	TSEN2	100	65.745	Mandrillus_leucophaeus
ENSMUSG00000042389	Tsen2	99	39.832	ENSMAMG00000009733	tsen2	99	40.252	Mastacembelus_armatus
ENSMUSG00000042389	Tsen2	100	54.678	ENSMGAG00000005015	TSEN2	100	54.470	Meleagris_gallopavo
ENSMUSG00000042389	Tsen2	100	68.577	ENSMICG00000016672	TSEN2	100	68.577	Microcebus_murinus
ENSMUSG00000042389	Tsen2	100	85.466	ENSMOCG00000020824	Tsen2	100	85.466	Microtus_ochrogaster
ENSMUSG00000042389	Tsen2	100	59.698	ENSMODG00000006249	TSEN2	100	59.179	Monodelphis_domestica
ENSMUSG00000042389	Tsen2	100	97.408	MGP_CAROLIEiJ_G0028752	Tsen2	100	97.408	Mus_caroli
ENSMUSG00000042389	Tsen2	100	94.783	MGP_PahariEiJ_G0022503	Tsen2	100	94.783	Mus_pahari
ENSMUSG00000042389	Tsen2	100	97.391	MGP_SPRETEiJ_G0029780	Tsen2	100	97.391	Mus_spretus
ENSMUSG00000042389	Tsen2	100	65.466	ENSMPUG00000017182	TSEN2	100	65.466	Mustela_putorius_furo
ENSMUSG00000042389	Tsen2	100	67.234	ENSMLUG00000017641	TSEN2	100	67.234	Myotis_lucifugus
ENSMUSG00000042389	Tsen2	100	65.612	ENSNLEG00000004696	TSEN2	100	65.401	Nomascus_leucogenys
ENSMUSG00000042389	Tsen2	97	54.425	ENSNLEG00000033166	-	100	54.425	Nomascus_leucogenys
ENSMUSG00000042389	Tsen2	63	81.915	ENSMEUG00000014148	-	62	81.915	Notamacropus_eugenii
ENSMUSG00000042389	Tsen2	100	61.822	ENSOPRG00000003456	TSEN2	100	61.822	Ochotona_princeps
ENSMUSG00000042389	Tsen2	100	63.002	ENSODEG00000002629	TSEN2	100	62.791	Octodon_degus
ENSMUSG00000042389	Tsen2	68	62.983	ENSONIG00000000278	tsen2	99	39.662	Oreochromis_niloticus
ENSMUSG00000042389	Tsen2	100	54.717	ENSOANG00000011648	-	100	55.136	Ornithorhynchus_anatinus
ENSMUSG00000042389	Tsen2	100	64.807	ENSOCUG00000013203	TSEN2	96	64.807	Oryctolagus_cuniculus
ENSMUSG00000042389	Tsen2	68	58.333	ENSORLG00000026661	-	77	58.333	Oryzias_latipes
ENSMUSG00000042389	Tsen2	68	58.889	ENSORLG00020006129	-	77	58.889	Oryzias_latipes_hni
ENSMUSG00000042389	Tsen2	68	58.333	ENSORLG00015000801	-	77	58.333	Oryzias_latipes_hsok
ENSMUSG00000042389	Tsen2	68	57.459	ENSOMEG00000001692	tsen2	77	57.459	Oryzias_melastigma
ENSMUSG00000042389	Tsen2	100	66.453	ENSOGAG00000002976	-	100	66.453	Otolemur_garnettii
ENSMUSG00000042389	Tsen2	100	61.028	ENSOGAG00000028352	-	100	61.456	Otolemur_garnettii
ENSMUSG00000042389	Tsen2	100	66.595	ENSOARG00000016087	TSEN2	91	66.595	Ovis_aries
ENSMUSG00000042389	Tsen2	98	48.337	ENSPPAG00000034639	-	99	48.115	Pan_paniscus
ENSMUSG00000042389	Tsen2	100	68.288	ENSPPAG00000035317	TSEN2	100	68.288	Pan_paniscus
ENSMUSG00000042389	Tsen2	100	64.783	ENSPTIG00000021018	TSEN2	100	64.565	Panthera_tigris_altaica
ENSMUSG00000042389	Tsen2	100	68.008	ENSPTRG00000014633	TSEN2	100	68.008	Pan_troglodytes
ENSMUSG00000042389	Tsen2	98	50.000	ENSPTRG00000050820	-	100	49.784	Pan_troglodytes
ENSMUSG00000042389	Tsen2	100	68.298	ENSPANG00000013415	TSEN2	100	68.298	Papio_anubis
ENSMUSG00000042389	Tsen2	100	47.170	ENSPKIG00000024801	tsen2	100	48.319	Paramormyrops_kingsleyae
ENSMUSG00000042389	Tsen2	99	53.459	ENSPSIG00000010669	-	96	53.459	Pelodiscus_sinensis
ENSMUSG00000042389	Tsen2	100	82.430	ENSPEMG00000013175	Tsen2	100	81.779	Peromyscus_maniculatus_bairdii
ENSMUSG00000042389	Tsen2	100	59.023	ENSPCIG00000002191	TSEN2	100	58.562	Phascolarctos_cinereus
ENSMUSG00000042389	Tsen2	68	59.341	ENSPFOG00000012459	tsen2	99	39.093	Poecilia_formosa
ENSMUSG00000042389	Tsen2	68	59.341	ENSPLAG00000013787	tsen2	99	38.445	Poecilia_latipinna
ENSMUSG00000042389	Tsen2	62	56.962	ENSPMEG00000002687	tsen2	83	56.962	Poecilia_mexicana
ENSMUSG00000042389	Tsen2	100	67.089	ENSPPYG00000013647	TSEN2	100	67.089	Pongo_abelii
ENSMUSG00000042389	Tsen2	100	59.362	ENSPCAG00000003542	TSEN2	100	59.362	Procavia_capensis
ENSMUSG00000042389	Tsen2	100	67.941	ENSPCOG00000019328	TSEN2	100	67.941	Propithecus_coquereli
ENSMUSG00000042389	Tsen2	82	81.364	ENSPVAG00000005820	TSEN2	80	80.909	Pteropus_vampyrus
ENSMUSG00000042389	Tsen2	78	62.673	ENSPNAG00000008203	tsen2	74	61.860	Pygocentrus_nattereri
ENSMUSG00000042389	Tsen2	100	88.841	ENSRNOG00000060175	Tsen2	100	88.412	Rattus_norvegicus
ENSMUSG00000042389	Tsen2	100	68.298	ENSRBIG00000033133	TSEN2	100	68.298	Rhinopithecus_bieti
ENSMUSG00000042389	Tsen2	100	68.298	ENSRROG00000041156	TSEN2	100	68.298	Rhinopithecus_roxellana
ENSMUSG00000042389	Tsen2	100	64.211	ENSSBOG00000035499	TSEN2	100	64.211	Saimiri_boliviensis_boliviensis
ENSMUSG00000042389	Tsen2	100	59.789	ENSSHAG00000010530	TSEN2	100	58.861	Sarcophilus_harrisii
ENSMUSG00000042389	Tsen2	100	44.864	ENSSFOG00015001309	tsen2	100	45.629	Scleropages_formosus
ENSMUSG00000042389	Tsen2	68	62.011	ENSSMAG00000006406	-	99	39.059	Scophthalmus_maximus
ENSMUSG00000042389	Tsen2	68	61.878	ENSSDUG00000018175	tsen2	73	61.878	Seriola_dumerili
ENSMUSG00000042389	Tsen2	52	50.943	ENSSLDG00000022171	-	62	50.943	Seriola_lalandi_dorsalis
ENSMUSG00000042389	Tsen2	100	56.476	ENSSPUG00000018099	TSEN2	100	55.508	Sphenodon_punctatus
ENSMUSG00000042389	Tsen2	65	50.595	ENSSPAG00000021756	-	76	50.595	Stegastes_partitus
ENSMUSG00000042389	Tsen2	100	67.516	ENSSSCG00000011580	TSEN2	100	67.516	Sus_scrofa
ENSMUSG00000042389	Tsen2	100	57.839	ENSTGUG00000004044	TSEN2	100	57.839	Taeniopygia_guttata
ENSMUSG00000042389	Tsen2	96	35.794	ENSTRUG00000004124	-	98	35.938	Takifugu_rubripes
ENSMUSG00000042389	Tsen2	99	35.861	ENSTNIG00000005222	-	99	35.656	Tetraodon_nigroviridis
ENSMUSG00000042389	Tsen2	73	76.471	ENSTBEG00000011740	TSEN2	73	76.471	Tupaia_belangeri
ENSMUSG00000042389	Tsen2	100	65.042	ENSTTRG00000016566	TSEN2	100	65.254	Tursiops_truncatus
ENSMUSG00000042389	Tsen2	100	66.737	ENSUMAG00000017610	TSEN2	100	66.737	Ursus_maritimus
ENSMUSG00000042389	Tsen2	67	62.791	ENSVPAG00000011061	-	75	62.791	Vicugna_pacos
ENSMUSG00000042389	Tsen2	100	66.737	ENSVVUG00000015253	TSEN2	100	66.526	Vulpes_vulpes
ENSMUSG00000042389	Tsen2	80	48.413	ENSXETG00000025146	tsen2	99	48.413	Xenopus_tropicalis
ENSMUSG00000042389	Tsen2	59	58.389	ENSXCOG00000017262	tsen2	78	58.389	Xiphophorus_couchianus
ENSMUSG00000042389	Tsen2	59	58.784	ENSXMAG00000012479	tsen2	77	58.784	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000213	tRNA-intron endonuclease activity	21873635.	IBA	Function
GO:0000214	tRNA-intron endonuclease complex	21873635.	IBA	Component
GO:0000379	tRNA-type intron splice site recognition and cleavage	21873635.	IBA	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0004518	nuclease activity	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005813	centrosome	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006388	tRNA splicing, via endonucleolytic cleavage and ligation	-	ISO	Process
GO:0006397	mRNA processing	-	IEA	Process
GO:0008033	tRNA processing	-	IEA	Process
GO:0016829	lyase activity	-	IEA	Function