EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000042396 (Gene tree)
Gene ID
67010
Gene Symbol
Rbm7
Alias
1200007M24Rik|1500011D06Rik
Full Name
RNA binding motif protein 7
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Minus strand
Length
6599 bases
Position
chr9:48488701-48495299
Accession
1914260
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000149397RRM_5PF13893.67.7e-0811
ENSMUSP00000126374RRM_5PF13893.62.4e-0711
ENSMUSP00000149397RRM_1PF00076.221.1e-1811
ENSMUSP00000126374RRM_1PF00076.222.6e-1811
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27281784Identification of RNA binding Proteins in Macrophages by Interactome CaptureIC & RAW264.72016 Jun 8Liepelt ADOI: 10.1074/mcp.M115.056564
23912277The RNA binding protein repertoire of embryonic stem cellsIC & mESC2013 Aug 4Kwon SCDOI: 10.1038/nsmb.2638
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseIC & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000214923-1867-ENSMUSP0000015076739 (aa)-A0A1L1SUJ3
ENSMUST00000213525-2703--- (aa)--
ENSMUST00000170000-1773-ENSMUSP00000126374265 (aa)-Q9CQT2
ENSMUST00000213276-2629-ENSMUSP00000149397158 (aa)-A0A1L1SRC3
Gene Model
Click here to download ENSMUSG00000042396's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000042396's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000042396Rbm76532.353ENSMUSG00000094936Rbm46232.353
ENSMUSG00000042396Rbm76832.479ENSMUSG00000022635Zcrb15432.479
ENSMUSG00000042396Rbm75334.146ENSMUSG00000022283Pabpc16030.667
ENSMUSG00000042396Rbm76439.216ENSMUSG00000068856Sf3b46346.667
ENSMUSG00000042396Rbm76532.353ENSMUSG00000033760Rbm4b5832.353
ENSMUSG00000042396Rbm76132.530ENSMUSG00000028546Elavl47130.928
ENSMUSG00000042396Rbm76733.019ENSMUSG00000030846Tial17733.019
ENSMUSG00000042396Rbm76933.945ENSMUSG00000071337Tia19734.066
ENSMUSG00000042396Rbm75830.864ENSMUSG00000008489Elavl27231.111
ENSMUSG00000042396Rbm76631.858ENSMUSG00000022774Ncbp26831.858
ENSMUSG00000042396Rbm75333.333ENSMUSG00000011257Pabpc45032.143
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000042396Rbm710083.521ENSG00000076053RBM710087.919Homo_sapiens
ENSMUSG00000042396Rbm79240.892ENSAPOG00000012768rbm79342.264Acanthochromis_polyacanthus
ENSMUSG00000042396Rbm710082.707ENSAMEG00000013276-10082.707Ailuropoda_melanoleuca
ENSMUSG00000042396Rbm75169.136ENSACIG00000021769-8769.136Amphilophus_citrinellus
ENSMUSG00000042396Rbm78954.167ENSAOCG00000004178rbm78243.750Amphiprion_ocellaris
ENSMUSG00000042396Rbm78954.167ENSAPEG00000021981rbm78243.750Amphiprion_percula
ENSMUSG00000042396Rbm75174.074ENSATEG00000000596-8674.074Anabas_testudineus
ENSMUSG00000042396Rbm78456.087ENSAPLG00000005180-10056.087Anas_platyrhynchos
ENSMUSG00000042396Rbm79360.759ENSACAG00000011589-9848.929Anolis_carolinensis
ENSMUSG00000042396Rbm79287.755ENSANAG00000031879-9487.755Aotus_nancymaae
ENSMUSG00000042396Rbm79684.211ENSANAG00000031340-10085.897Aotus_nancymaae
ENSMUSG00000042396Rbm78955.102ENSACLG00000001203rbm79341.569Astatotilapia_calliptera
ENSMUSG00000042396Rbm79359.355ENSAMXG00000037251rbm79847.143Astyanax_mexicanus
ENSMUSG00000042396Rbm710082.331ENSBTAG00000008219RBM710084.211Bos_taurus
ENSMUSG00000042396Rbm710083.521ENSCJAG00000011949-9887.333Callithrix_jacchus
ENSMUSG00000042396Rbm710081.887ENSCAFG00000013514-10082.264Canis_familiaris
ENSMUSG00000042396Rbm710082.264ENSCAFG00020002518-9787.162Canis_lupus_dingo
ENSMUSG00000042396Rbm710081.203ENSCHIG00000008632-10083.083Capra_hircus
ENSMUSG00000042396Rbm710081.203ENSCHIG00000010879-10083.083Capra_hircus
ENSMUSG00000042396Rbm710083.146ENSTSYG00000013731-10083.146Carlito_syrichta
ENSMUSG00000042396Rbm78883.830ENSCAPG00000012045-10083.830Cavia_aperea
ENSMUSG00000042396Rbm79082.158ENSCPOG00000034273-10082.158Cavia_porcellus
ENSMUSG00000042396Rbm710085.019ENSCCAG00000036534-10085.393Cebus_capucinus
ENSMUSG00000042396Rbm710084.644ENSCATG00000037361-10084.644Cercocebus_atys
ENSMUSG00000042396Rbm710084.701ENSCLAG00000014875-10084.701Chinchilla_lanigera
ENSMUSG00000042396Rbm710084.387ENSCSAG00000002756-10084.387Chlorocebus_sabaeus
ENSMUSG00000042396Rbm79288.514ENSCHOG00000012747-10088.514Choloepus_hoffmanni
ENSMUSG00000042396Rbm78948.936ENSCHOG00000007826RBM116548.936Choloepus_hoffmanni
ENSMUSG00000042396Rbm79471.519ENSCPBG00000009366-8571.519Chrysemys_picta_bellii
ENSMUSG00000042396Rbm75964.894ENSCPBG00000028340RBM119040.254Chrysemys_picta_bellii
ENSMUSG00000042396Rbm710084.644ENSCANG00000031398-10084.644Colobus_angolensis_palliatus
ENSMUSG00000042396Rbm710096.604ENSCGRG00001019236Rbm710096.604Cricetulus_griseus_chok1gshd
ENSMUSG00000042396Rbm710096.226ENSCGRG00000005045Rbm710096.226Cricetulus_griseus_crigri
ENSMUSG00000042396Rbm76165.306ENSCSEG00000002160rbm78742.194Cynoglossus_semilaevis
ENSMUSG00000042396Rbm78954.861ENSCVAG00000023415rbm79341.418Cyprinodon_variegatus
ENSMUSG00000042396Rbm79158.784ENSDARG00000020841rbm79844.074Danio_rerio
ENSMUSG00000042396Rbm75551.724ENSDARG00000090202rbm115551.136Danio_rerio
ENSMUSG00000042396Rbm710084.644ENSDNOG00000018423-10084.644Dasypus_novemcinctus
ENSMUSG00000042396Rbm79686.755ENSDORG00000029149Rbm710082.707Dipodomys_ordii
ENSMUSG00000042396Rbm76359.596ENSDORG00000000801Rbm116959.596Dipodomys_ordii
ENSMUSG00000042396Rbm710076.866ENSETEG00000015869-10076.866Echinops_telfairi
ENSMUSG00000042396Rbm75866.304ENSEBUG00000009746rbm76166.304Eptatretus_burgeri
ENSMUSG00000042396Rbm710084.586ENSEASG00005006676-10084.586Equus_asinus_asinus
ENSMUSG00000042396Rbm710084.962ENSECAG00000004636-10084.962Equus_caballus
ENSMUSG00000042396Rbm79683.553ENSEEUG00000015854-9870.229Erinaceus_europaeus
ENSMUSG00000042396Rbm79257.143ENSELUG00000017868rbm79846.377Esox_lucius
ENSMUSG00000042396Rbm710081.955ENSFCAG00000040484-10083.835Felis_catus
ENSMUSG00000042396Rbm78859.859ENSFALG00000010039-8850.545Ficedula_albicollis
ENSMUSG00000042396Rbm710082.331ENSFDAG00000010616-10082.331Fukomys_damarensis
ENSMUSG00000042396Rbm75268.293ENSFHEG00000000845-9168.293Fundulus_heteroclitus
ENSMUSG00000042396Rbm78950.340ENSGMOG00000013362rbm79439.560Gadus_morhua
ENSMUSG00000042396Rbm79266.443ENSGALG00000007017RBM710052.921Gallus_gallus
ENSMUSG00000042396Rbm77655.833ENSGALG00000044391RBM115748.667Gallus_gallus
ENSMUSG00000042396Rbm78555.072ENSGAFG00000000870rbm75451.333Gambusia_affinis
ENSMUSG00000042396Rbm78955.479ENSGACG00000006628rbm75754.545Gasterosteus_aculeatus
ENSMUSG00000042396Rbm75964.894ENSGAGG00000010715RBM118840.254Gopherus_agassizii
ENSMUSG00000042396Rbm79271.795ENSGAGG00000021127-10059.136Gopherus_agassizii
ENSMUSG00000042396Rbm79387.755ENSGGOG00000009941-6497.674Gorilla_gorilla
ENSMUSG00000042396Rbm78955.102ENSHBUG00000004319rbm79341.569Haplochromis_burtoni
ENSMUSG00000042396Rbm710074.627ENSHGLG00000002486-9574.627Heterocephalus_glaber_female
ENSMUSG00000042396Rbm75391.566ENSHGLG00000003564-7391.566Heterocephalus_glaber_female
ENSMUSG00000042396Rbm79681.176ENSHGLG00000016655-9881.176Heterocephalus_glaber_female
ENSMUSG00000042396Rbm710086.842ENSHGLG00000018700RBM710086.842Heterocephalus_glaber_female
ENSMUSG00000042396Rbm79977.736ENSHGLG00000014428-9877.736Heterocephalus_glaber_female
ENSMUSG00000042396Rbm79366.667ENSHGLG00000013918-10067.333Heterocephalus_glaber_female
ENSMUSG00000042396Rbm710060.150ENSHGLG00100005739-9461.654Heterocephalus_glaber_male
ENSMUSG00000042396Rbm79366.667ENSHGLG00100015249-10067.333Heterocephalus_glaber_male
ENSMUSG00000042396Rbm710086.466ENSHGLG00100005358-10086.466Heterocephalus_glaber_male
ENSMUSG00000042396Rbm710074.627ENSHGLG00100011792-9574.627Heterocephalus_glaber_male
ENSMUSG00000042396Rbm75391.566ENSHGLG00100001021-7391.566Heterocephalus_glaber_male
ENSMUSG00000042396Rbm79681.176ENSHGLG00100009317-9881.176Heterocephalus_glaber_male
ENSMUSG00000042396Rbm75572.414ENSHGLG00100008973-7372.414Heterocephalus_glaber_male
ENSMUSG00000042396Rbm79977.736ENSHGLG00100011703-9877.736Heterocephalus_glaber_male
ENSMUSG00000042396Rbm75171.605ENSHCOG00000010866-8571.605Hippocampus_comes
ENSMUSG00000042396Rbm79753.459ENSIPUG00000009397rbm79846.992Ictalurus_punctatus
ENSMUSG00000042396Rbm75551.724ENSIPUG00000018209rbm119351.724Ictalurus_punctatus
ENSMUSG00000042396Rbm710080.827ENSSTOG00000012459-10080.827Ictidomys_tridecemlineatus
ENSMUSG00000042396Rbm78781.159ENSSTOG00000031973-10069.531Ictidomys_tridecemlineatus
ENSMUSG00000042396Rbm710084.644ENSJJAG00000011823-10084.644Jaculus_jaculus
ENSMUSG00000042396Rbm79975.472ENSJJAG00000016540-10075.472Jaculus_jaculus
ENSMUSG00000042396Rbm78951.370ENSLBEG00000024902rbm79540.602Labrus_bergylta
ENSMUSG00000042396Rbm79466.447ENSLACG00000018620-9856.343Latimeria_chalumnae
ENSMUSG00000042396Rbm79259.060ENSLOCG00000002408rbm79847.253Lepisosteus_oculatus
ENSMUSG00000042396Rbm710078.731ENSLAFG00000012444-10078.731Loxodonta_africana
ENSMUSG00000042396Rbm710085.019ENSMFAG00000000965-10085.019Macaca_fascicularis
ENSMUSG00000042396Rbm710084.962ENSMMUG00000012270RBM710084.962Macaca_mulatta
ENSMUSG00000042396Rbm710084.644ENSMNEG00000005397-10084.644Macaca_nemestrina
ENSMUSG00000042396Rbm710085.393ENSMLEG00000041953-10085.393Mandrillus_leucophaeus
ENSMUSG00000042396Rbm79155.034ENSMAMG00000014145rbm79642.804Mastacembelus_armatus
ENSMUSG00000042396Rbm78954.422ENSMZEG00005013295rbm79341.176Maylandia_zebra
ENSMUSG00000042396Rbm79268.919ENSMGAG00000003004-10054.167Meleagris_gallopavo
ENSMUSG00000042396Rbm79297.260ENSMAUG00000017938-9497.260Mesocricetus_auratus
ENSMUSG00000042396Rbm710093.585ENSMAUG00000001942-10093.585Mesocricetus_auratus
ENSMUSG00000042396Rbm710084.615ENSMICG00000042981-10084.615Microcebus_murinus
ENSMUSG00000042396Rbm710092.830ENSMOCG00000009674Rbm710092.830Microtus_ochrogaster
ENSMUSG00000042396Rbm78147.445ENSMMOG00000004967rbm76860.563Mola_mola
ENSMUSG00000042396Rbm710071.841ENSMODG00000013918-10071.841Monodelphis_domestica
ENSMUSG00000042396Rbm78950.685ENSMALG00000010901rbm78240.964Monopterus_albus
ENSMUSG00000042396Rbm710098.496MGP_CAROLIEiJ_G0032167Rbm710098.496Mus_caroli
ENSMUSG00000042396Rbm710098.491MGP_PahariEiJ_G0015035Rbm710098.491Mus_pahari
ENSMUSG00000042396Rbm710097.736MGP_SPRETEiJ_G0033306Rbm710097.736Mus_spretus
ENSMUSG00000042396Rbm710082.707ENSMPUG00000003941-10083.083Mustela_putorius_furo
ENSMUSG00000042396Rbm79483.784ENSMLUG00000023234-9979.389Myotis_lucifugus
ENSMUSG00000042396Rbm710085.019ENSNGAG00000006244-10085.019Nannospalax_galili
ENSMUSG00000042396Rbm78955.102ENSNBRG00000017104rbm79341.569Neolamprologus_brichardi
ENSMUSG00000042396Rbm710084.644ENSNLEG00000029494-10084.644Nomascus_leucogenys
ENSMUSG00000042396Rbm710063.197ENSMEUG00000006187-10063.197Notamacropus_eugenii
ENSMUSG00000042396Rbm79685.526ENSOPRG00000011060-10079.026Ochotona_princeps
ENSMUSG00000042396Rbm79865.000ENSODEG00000000186-9665.000Octodon_degus
ENSMUSG00000042396Rbm79674.834ENSODEG00000016844-10064.906Octodon_degus
ENSMUSG00000042396Rbm79489.262ENSODEG00000010164-10089.262Octodon_degus
ENSMUSG00000042396Rbm78954.362ENSONIG00000005369rbm79342.023Oreochromis_niloticus
ENSMUSG00000042396Rbm710070.545ENSOANG00000001755-9370.545Ornithorhynchus_anatinus
ENSMUSG00000042396Rbm710088.390ENSOCUG00000003342-10088.390Oryctolagus_cuniculus
ENSMUSG00000042396Rbm78955.479ENSORLG00000028880rbm75655.556Oryzias_latipes
ENSMUSG00000042396Rbm78954.795ENSORLG00020010841rbm75554.902Oryzias_latipes_hni
ENSMUSG00000042396Rbm78952.349ENSORLG00015000536rbm75654.248Oryzias_latipes_hsok
ENSMUSG00000042396Rbm76359.596ENSOGAG00000005760RBM115059.596Otolemur_garnettii
ENSMUSG00000042396Rbm710085.768ENSOGAG00000016857-10085.768Otolemur_garnettii
ENSMUSG00000042396Rbm710081.955ENSOARG00000000924-9983.835Ovis_aries
ENSMUSG00000042396Rbm710083.895ENSPPAG00000027572-10083.895Pan_paniscus
ENSMUSG00000042396Rbm710083.835ENSPPRG00000004372-10083.835Panthera_pardus
ENSMUSG00000042396Rbm710083.835ENSPTIG00000013512-10083.835Panthera_tigris_altaica
ENSMUSG00000042396Rbm79678.431ENSPTRG00000049329-9878.431Pan_troglodytes
ENSMUSG00000042396Rbm710083.895ENSPTRG00000004305RBM710083.895Pan_troglodytes
ENSMUSG00000042396Rbm710084.270ENSPANG00000009431-10084.270Papio_anubis
ENSMUSG00000042396Rbm79162.667ENSPKIG00000016648rbm79850.376Paramormyrops_kingsleyae
ENSMUSG00000042396Rbm78951.389ENSPMGG00000001523rbm79067.500Periophthalmus_magnuspinnatus
ENSMUSG00000042396Rbm79395.238ENSPEMG00000011553-10087.833Peromyscus_maniculatus_bairdii
ENSMUSG00000042396Rbm75467.442ENSPMAG00000001518-9767.442Petromyzon_marinus
ENSMUSG00000042396Rbm79772.388ENSPCIG00000011225-8472.826Phascolarctos_cinereus
ENSMUSG00000042396Rbm78555.797ENSPFOG00000002193rbm79440.794Poecilia_formosa
ENSMUSG00000042396Rbm78456.204ENSPLAG00000010517rbm79440.794Poecilia_latipinna
ENSMUSG00000042396Rbm78555.797ENSPMEG00000003603rbm79440.433Poecilia_mexicana
ENSMUSG00000042396Rbm78556.429ENSPREG00000015610rbm79041.264Poecilia_reticulata
ENSMUSG00000042396Rbm710083.521ENSPPYG00000003894-10083.521Pongo_abelii
ENSMUSG00000042396Rbm76361.616ENSPCAG00000008368-6961.616Procavia_capensis
ENSMUSG00000042396Rbm78866.667ENSPCAG00000003270-10066.667Procavia_capensis
ENSMUSG00000042396Rbm710084.962ENSPVAG00000005294-10084.962Pteropus_vampyrus
ENSMUSG00000042396Rbm78955.102ENSPNYG00000012084rbm79341.961Pundamilia_nyererei
ENSMUSG00000042396Rbm79157.419ENSPNAG00000012813rbm79845.126Pygocentrus_nattereri
ENSMUSG00000042396Rbm75252.439ENSPNAG00000009243rbm119052.439Pygocentrus_nattereri
ENSMUSG00000042396Rbm710085.019ENSRBIG00000044762-10085.019Rhinopithecus_bieti
ENSMUSG00000042396Rbm710085.019ENSRROG00000032280-10085.019Rhinopithecus_roxellana
ENSMUSG00000042396Rbm710082.397ENSSBOG00000027830-10082.772Saimiri_boliviensis_boliviensis
ENSMUSG00000042396Rbm710072.826ENSSHAG00000008426-10072.826Sarcophilus_harrisii
ENSMUSG00000042396Rbm76153.608ENSSFOG00015013138rbm117653.608Scleropages_formosus
ENSMUSG00000042396Rbm79157.962ENSSFOG00015008458rbm79847.744Scleropages_formosus
ENSMUSG00000042396Rbm78954.422ENSSMAG00000003040rbm75752.597Scophthalmus_maximus
ENSMUSG00000042396Rbm78953.472ENSSDUG00000005361rbm79540.613Seriola_dumerili
ENSMUSG00000042396Rbm78953.472ENSSLDG00000003221rbm79540.613Seriola_lalandi_dorsalis
ENSMUSG00000042396Rbm78852.555ENSSPUG00000006032-9955.109Sphenodon_punctatus
ENSMUSG00000042396Rbm78955.862ENSSPAG00000019320rbm76872.093Stegastes_partitus
ENSMUSG00000042396Rbm710083.396ENSSSCG00000027905-10083.396Sus_scrofa
ENSMUSG00000042396Rbm79362.585ENSTGUG00000000117-10048.239Taeniopygia_guttata
ENSMUSG00000042396Rbm79449.020ENSTRUG00000020355rbm75649.020Takifugu_rubripes
ENSMUSG00000042396Rbm710075.655ENSTBEG00000008650-10075.655Tupaia_belangeri
ENSMUSG00000042396Rbm710083.146ENSTTRG00000001515-10083.146Tursiops_truncatus
ENSMUSG00000042396Rbm710083.459ENSUAMG00000019095-10083.459Ursus_americanus
ENSMUSG00000042396Rbm710083.459ENSUMAG00000003774-10083.459Ursus_maritimus
ENSMUSG00000042396Rbm710084.644ENSVPAG00000006300-10084.644Vicugna_pacos
ENSMUSG00000042396Rbm79166.887ENSXETG00000012654rbm79956.439Xenopus_tropicalis
ENSMUSG00000042396Rbm75168.750ENSXCOG00000001191-8868.750Xiphophorus_couchianus
ENSMUSG00000042396Rbm78952.083ENSXMAG00000000970rbm79040.755Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000381regulation of alternative mRNA splicing, via spliceosome21873635.IBAProcess
GO:0003676nucleic acid binding-IEAFunction
GO:0003723RNA binding-IEAFunction
GO:0003727single-stranded RNA binding21873635.IBAFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005634nucleus-ISOComponent
GO:0005654nucleoplasm-ISOComponent
GO:0051321meiotic cell cycle-IEAProcess

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