EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000042496 (Gene tree)
Gene ID: 382066
Gene Symbol: Prdm10
Alias: LOC382066|tristanin
Full Name: PR domain containing 10
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 101186 bases
Position: chr9:31280538-31381723
Accession: 2682952
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000149526	zf-C2H2	PF00096.26	5.4e-33	1	5
ENSMUSP00000149526	zf-C2H2	PF00096.26	5.4e-33	2	5
ENSMUSP00000149526	zf-C2H2	PF00096.26	5.4e-33	3	5
ENSMUSP00000149526	zf-C2H2	PF00096.26	5.4e-33	4	5
ENSMUSP00000149526	zf-C2H2	PF00096.26	5.4e-33	5	5
ENSMUSP00000074104	zf-C2H2	PF00096.26	1.2e-26	1	4
ENSMUSP00000074104	zf-C2H2	PF00096.26	1.2e-26	2	4
ENSMUSP00000074104	zf-C2H2	PF00096.26	1.2e-26	3	4
ENSMUSP00000074104	zf-C2H2	PF00096.26	1.2e-26	4	4
ENSMUSP00000149699	zf-C2H2	PF00096.26	1.8e-26	1	4
ENSMUSP00000149699	zf-C2H2	PF00096.26	1.8e-26	2	4
ENSMUSP00000149699	zf-C2H2	PF00096.26	1.8e-26	3	4
ENSMUSP00000149699	zf-C2H2	PF00096.26	1.8e-26	4	4
ENSMUSP00000074104	zf-met	PF12874.7	1.2e-08	1	2
ENSMUSP00000074104	zf-met	PF12874.7	1.2e-08	2	2
ENSMUSP00000149699	zf-met	PF12874.7	5.2e-06	1	2
ENSMUSP00000149699	zf-met	PF12874.7	5.2e-06	2	2
ENSMUSP00000149526	zf-met	PF12874.7	1.2e-05	1	2
ENSMUSP00000149526	zf-met	PF12874.7	1.2e-05	2	2
ENSMUSP00000149526	zf-C2H2_jaz	PF12171.8	3.2e-16	1	1
ENSMUSP00000074104	zf-C2H2_jaz	PF12171.8	1.4e-13	1	1
ENSMUSP00000149699	zf-C2H2_jaz	PF12171.8	8.2e-12	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000215847	-	3519	XM_006510464	ENSMUSP00000149699	1172 (aa)	XP_006510527	A0A1L1SS03
ENSMUST00000215499	-	6772	-	ENSMUSP00000149526	1115 (aa)	-	A0A1L1SRM4
ENSMUST00000136144	-	3064	-	-	- (aa)	-	-
ENSMUST00000074510	-	3408	-	ENSMUSP00000074104	1135 (aa)	-	D3YYD1
ENSMUST00000117389	-	1952	-	ENSMUSP00000112588	341 (aa)	-	Q3UTQ7

Gene Model

Click here to download ENSMUSG00000042496's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000042496's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000042496	Prdm10	100	93.834	ENSG00000170325	PRDM10	100	94.335	Homo_sapiens
ENSMUSG00000042496	Prdm10	96	96.053	ENSAMEG00000002425	PRDM10	100	86.999	Ailuropoda_melanoleuca
ENSMUSG00000042496	Prdm10	100	82.378	ENSAPLG00000004858	PRDM10	100	82.654	Anas_platyrhynchos
ENSMUSG00000042496	Prdm10	100	84.625	ENSANAG00000022064	PRDM10	100	77.111	Aotus_nancymaae
ENSMUSG00000042496	Prdm10	100	89.670	ENSBTAG00000019001	PRDM10	100	91.587	Bos_taurus
ENSMUSG00000042496	Prdm10	100	91.117	ENSCJAG00000009235	PRDM10	100	91.117	Callithrix_jacchus
ENSMUSG00000042496	Prdm10	100	91.411	ENSCAFG00000010164	PRDM10	100	91.411	Canis_familiaris
ENSMUSG00000042496	Prdm10	100	93.459	ENSCAFG00020010152	PRDM10	96	98.667	Canis_lupus_dingo
ENSMUSG00000042496	Prdm10	100	91.585	ENSCHIG00000026530	PRDM10	100	91.129	Capra_hircus
ENSMUSG00000042496	Prdm10	100	91.639	ENSTSYG00000000544	PRDM10	100	91.723	Carlito_syrichta
ENSMUSG00000042496	Prdm10	100	85.251	ENSCAPG00000017296	PRDM10	100	85.422	Cavia_aperea
ENSMUSG00000042496	Prdm10	99	84.609	ENSCPOG00000000389	PRDM10	98	86.359	Cavia_porcellus
ENSMUSG00000042496	Prdm10	100	90.838	ENSCCAG00000024567	PRDM10	100	91.098	Cebus_capucinus
ENSMUSG00000042496	Prdm10	100	91.373	ENSCATG00000040031	PRDM10	100	91.637	Cercocebus_atys
ENSMUSG00000042496	Prdm10	99	90.877	ENSCLAG00000014605	PRDM10	99	92.369	Chinchilla_lanigera
ENSMUSG00000042496	Prdm10	100	91.286	ENSCSAG00000002202	PRDM10	100	91.624	Chlorocebus_sabaeus
ENSMUSG00000042496	Prdm10	96	85.903	ENSCPBG00000026880	PRDM10	99	79.527	Chrysemys_picta_bellii
ENSMUSG00000042496	Prdm10	100	91.098	ENSCANG00000032669	PRDM10	100	91.357	Colobus_angolensis_palliatus
ENSMUSG00000042496	Prdm10	100	95.055	ENSCGRG00001021647	Prdm10	100	93.926	Cricetulus_griseus_chok1gshd
ENSMUSG00000042496	Prdm10	100	95.055	ENSCGRG00000006562	Prdm10	100	93.926	Cricetulus_griseus_crigri
ENSMUSG00000042496	Prdm10	83	90.421	ENSDNOG00000001366	PRDM10	95	90.421	Dasypus_novemcinctus
ENSMUSG00000042496	Prdm10	100	92.242	ENSDORG00000014292	Prdm10	100	92.157	Dipodomys_ordii
ENSMUSG00000042496	Prdm10	96	98.529	ENSEASG00005022914	PRDM10	99	93.012	Equus_asinus_asinus
ENSMUSG00000042496	Prdm10	96	98.529	ENSECAG00000011499	PRDM10	99	92.836	Equus_caballus
ENSMUSG00000042496	Prdm10	98	90.509	ENSFCAG00000004111	PRDM10	96	90.509	Felis_catus
ENSMUSG00000042496	Prdm10	98	84.004	ENSFALG00000004873	PRDM10	100	79.085	Ficedula_albicollis
ENSMUSG00000042496	Prdm10	96	96.104	ENSFDAG00000017311	PRDM10	100	90.034	Fukomys_damarensis
ENSMUSG00000042496	Prdm10	96	85.931	ENSGALG00000033660	PRDM10	99	82.852	Gallus_gallus
ENSMUSG00000042496	Prdm10	98	65.281	ENSGACG00000012293	prdm10	99	67.949	Gasterosteus_aculeatus
ENSMUSG00000042496	Prdm10	100	80.940	ENSGAGG00000012523	PRDM10	99	80.940	Gopherus_agassizii
ENSMUSG00000042496	Prdm10	100	91.837	ENSGGOG00000015359	PRDM10	100	91.759	Gorilla_gorilla
ENSMUSG00000042496	Prdm10	99	91.630	ENSHGLG00000001106	PRDM10	97	94.737	Heterocephalus_glaber_female
ENSMUSG00000042496	Prdm10	99	91.630	ENSHGLG00100002350	PRDM10	97	94.737	Heterocephalus_glaber_male
ENSMUSG00000042496	Prdm10	100	91.970	ENSSTOG00000002015	PRDM10	100	92.223	Ictidomys_tridecemlineatus
ENSMUSG00000042496	Prdm10	100	83.595	ENSJJAG00000021493	Prdm10	100	83.682	Jaculus_jaculus
ENSMUSG00000042496	Prdm10	100	89.068	ENSLAFG00000031867	PRDM10	100	88.889	Loxodonta_africana
ENSMUSG00000042496	Prdm10	100	91.373	ENSMFAG00000031008	PRDM10	100	91.637	Macaca_fascicularis
ENSMUSG00000042496	Prdm10	100	91.373	ENSMMUG00000017555	PRDM10	100	91.637	Macaca_mulatta
ENSMUSG00000042496	Prdm10	100	91.285	ENSMNEG00000036493	PRDM10	100	91.549	Macaca_nemestrina
ENSMUSG00000042496	Prdm10	84	100.000	ENSMLEG00000042028	PRDM10	92	98.958	Mandrillus_leucophaeus
ENSMUSG00000042496	Prdm10	96	86.091	ENSMGAG00000001112	PRDM10	100	79.395	Meleagris_gallopavo
ENSMUSG00000042496	Prdm10	100	91.176	ENSMICG00000013888	PRDM10	100	91.436	Microcebus_murinus
ENSMUSG00000042496	Prdm10	100	95.315	ENSMOCG00000021853	Prdm10	100	94.889	Microtus_ochrogaster
ENSMUSG00000042496	Prdm10	80	82.863	ENSMODG00000004979	PRDM10	99	85.973	Monodelphis_domestica
ENSMUSG00000042496	Prdm10	100	99.383	MGP_SPRETEiJ_G0033061	-	100	99.383	Mus_spretus
ENSMUSG00000042496	Prdm10	100	90.347	ENSMPUG00000008711	PRDM10	99	90.347	Mustela_putorius_furo
ENSMUSG00000042496	Prdm10	100	89.696	ENSMLUG00000013051	PRDM10	100	89.443	Myotis_lucifugus
ENSMUSG00000042496	Prdm10	100	94.113	ENSNGAG00000000580	Prdm10	100	94.113	Nannospalax_galili
ENSMUSG00000042496	Prdm10	100	91.461	ENSNLEG00000007488	PRDM10	100	91.725	Nomascus_leucogenys
ENSMUSG00000042496	Prdm10	100	90.601	ENSODEG00000005309	PRDM10	100	90.601	Octodon_degus
ENSMUSG00000042496	Prdm10	100	76.661	ENSOANG00000000577	-	100	75.980	Ornithorhynchus_anatinus
ENSMUSG00000042496	Prdm10	100	90.085	ENSOCUG00000003736	PRDM10	100	90.085	Oryctolagus_cuniculus
ENSMUSG00000042496	Prdm10	100	90.431	ENSOGAG00000010723	PRDM10	100	90.431	Otolemur_garnettii
ENSMUSG00000042496	Prdm10	100	90.008	ENSOARG00000014507	PRDM10	100	89.576	Ovis_aries
ENSMUSG00000042496	Prdm10	100	91.752	ENSPPAG00000042881	PRDM10	100	91.674	Pan_paniscus
ENSMUSG00000042496	Prdm10	100	90.008	ENSPPRG00000007002	PRDM10	100	90.008	Panthera_pardus
ENSMUSG00000042496	Prdm10	100	89.924	ENSPTIG00000013331	PRDM10	100	89.924	Panthera_tigris_altaica
ENSMUSG00000042496	Prdm10	100	91.922	ENSPTRG00000004477	PRDM10	100	91.844	Pan_troglodytes
ENSMUSG00000042496	Prdm10	100	92.675	ENSPANG00000017470	PRDM10	100	92.930	Papio_anubis
ENSMUSG00000042496	Prdm10	100	96.422	ENSPEMG00000014985	Prdm10	100	96.422	Peromyscus_maniculatus_bairdii
ENSMUSG00000042496	Prdm10	100	91.047	ENSPPYG00000004061	PRDM10	100	91.132	Pongo_abelii
ENSMUSG00000042496	Prdm10	88	94.545	ENSPCAG00000014514	PRDM10	92	94.545	Procavia_capensis
ENSMUSG00000042496	Prdm10	100	84.868	ENSPCOG00000023406	PRDM10	100	78.171	Propithecus_coquereli
ENSMUSG00000042496	Prdm10	100	90.633	ENSPVAG00000012764	PRDM10	100	90.295	Pteropus_vampyrus
ENSMUSG00000042496	Prdm10	100	96.672	ENSRNOG00000007853	Prdm10	100	96.672	Rattus_norvegicus
ENSMUSG00000042496	Prdm10	100	91.037	ENSRBIG00000030924	PRDM10	100	91.125	Rhinopithecus_bieti
ENSMUSG00000042496	Prdm10	100	90.878	ENSRROG00000034334	PRDM10	100	90.963	Rhinopithecus_roxellana
ENSMUSG00000042496	Prdm10	100	91.037	ENSSBOG00000008773	PRDM10	100	91.125	Saimiri_boliviensis_boliviensis
ENSMUSG00000042496	Prdm10	99	84.020	ENSSHAG00000004503	PRDM10	99	84.093	Sarcophilus_harrisii
ENSMUSG00000042496	Prdm10	68	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
ENSMUSG00000042496	Prdm10	100	82.814	ENSSPUG00000001178	PRDM10	99	82.814	Sphenodon_punctatus
ENSMUSG00000042496	Prdm10	96	96.154	ENSSSCG00000015243	PRDM10	100	89.605	Sus_scrofa
ENSMUSG00000042496	Prdm10	100	82.338	ENSTGUG00000000530	PRDM10	100	82.007	Taeniopygia_guttata
ENSMUSG00000042496	Prdm10	95	90.308	ENSTBEG00000007221	PRDM10	94	90.308	Tupaia_belangeri
ENSMUSG00000042496	Prdm10	100	88.256	ENSTTRG00000009189	PRDM10	100	87.679	Tursiops_truncatus
ENSMUSG00000042496	Prdm10	91	94.083	ENSUAMG00000018832	PRDM10	95	94.083	Ursus_americanus
ENSMUSG00000042496	Prdm10	100	89.722	ENSUMAG00000003167	PRDM10	97	94.805	Ursus_maritimus
ENSMUSG00000042496	Prdm10	100	90.396	ENSVVUG00000019878	PRDM10	100	90.396	Vulpes_vulpes
ENSMUSG00000042496	Prdm10	98	71.176	ENSXETG00000032173	PRDM10	90	73.420	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000979	RNA polymerase II core promoter sequence-specific DNA binding	21873635.	IBA	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0008168	methyltransferase activity	-	IEA	Function
GO:0010468	regulation of gene expression	21873635.	IBA	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0032259	methylation	-	IEA	Process
GO:0035097	histone methyltransferase complex	21873635.	IBA	Component
GO:0046872	metal ion binding	-	IEA	Function