EuRBPDB

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  • Description
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000042520 (Gene tree)
Gene ID
74383
Gene Symbol
Ubap2l
Alias
3110083O19Rik|4932431F02Rik|A430103N23Rik|NICE-4
Full Name
ubiquitin-associated protein 2-like
Gene Type
protein_coding
Species
Mus_musculus
Status
putative
Strand
Minus strand
Length
52489
Position
chr3: 90000140-90052628
Accession
1921633
RBP type
non-canonical RBP
Summary
-
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
25993413Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle ProgressionIC & MEF2015Boucas JDOI: 10.1371/journal.pone.0125745
27281784Identification of RNA binding Proteins in Macrophages by Interactome CaptureIC & RAW264.72016 Jun 8Liepelt ADOI: 10.1074/mcp.M115.056564
23912277The RNA binding protein repertoire of embryonic stem cellsIC & mESC2013 Aug 4Kwon SCDOI: 10.1038/nsmb.2638
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseIC & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseRBDmap & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000090908-3629XM_011240248ENSMUSP00000088424983 (aa)XP_011238550A0A0H2UH17
ENSMUST00000196843-3975XM_006502163ENSMUSP000001434591107 (aa)XP_006502226Q80X50
ENSMUST00000199050-473-ENSMUSP00000142719129 (aa)-A0A0G2JEC6
ENSMUST00000195995-3516-ENSMUSP000001436381014 (aa)-Q80X50
ENSMUST00000199834-3494XM_006502186ENSMUSP000001432541014 (aa)XP_006502249Q80X50
ENSMUST00000197903-328-ENSMUSP0000014351981 (aa)-A0A0G2JGD0
ENSMUST00000199016-2396--- (aa)--
ENSMUST00000029553-3509XM_006502170ENSMUSP000000295531105 (aa)XP_006502233Q80X50
ENSMUST00000199612-2789--- (aa)--
ENSMUST00000197633-1490--- (aa)--
ENSMUST00000199301-2318--- (aa)--
ENSMUST00000196747-2099--- (aa)--
ENSMUST00000200195-479--- (aa)--
ENSMUST00000200301-620--- (aa)--
ENSMUST00000196952-1398--- (aa)--
ENSMUST00000199929-623-ENSMUSP0000014248857 (aa)-A0A0G2JDT1
ENSMUST00000198322-3385-ENSMUSP000001425241067 (aa)-A0A0G2JDV6
ENSMUST00000196568-2681--- (aa)--
ENSMUST00000064639-4073XM_006502156ENSMUSP000000661381112 (aa)XP_006502219Q80X50
ENSMUST00000196633-410-ENSMUSP00000143423105 (aa)-A0A0G2JG47
ENSMUST00000197177-3503XM_017319772ENSMUSP00000143246497 (aa)XP_017175261A0A0G2JFN7
ENSMUST00000198282-2271--- (aa)--
ENSMUST00000196917-592-ENSMUSP0000014260250 (aa)-A0A0G2JE24
Gene Model
Click here to download ENSMUSG00000042520's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000042520's network
Orthologs identified by RBPome
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000042520Ubap2l10063.855ENSDARG00000060065ubap2b8256.923Danio_rerio
ENSMUSG00000042520Ubap2l100100.000ENSG00000143569UBAP2L10099.451Homo_sapiens
ENSMUSG00000042520Ubap2l9866.038ENSG00000137073UBAP29559.143Homo_sapiens
ENSMUSG00000042520Ubap2l9867.290ENSMUSG00000028433Ubap29453.731Mus_musculus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003674molecular_function-NDFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005737cytoplasm21873635.IBAComponent
GO:0031519PcG protein complex-ISOComponent
GO:0061484hematopoietic stem cell homeostasis21873635.IBAProcess
GO:0061484hematopoietic stem cell homeostasis25185265.IMPProcess
GO:0061484hematopoietic stem cell homeostasis-ISOProcess

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