EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000042548 (Gene tree)
Gene ID: 228790
Gene Symbol: Asxl1
Alias: -
Full Name: additional sex combs like 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 58179 bases
Position: chr2:153345829-153404007
Accession: 2684063
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000154224	HARE-HTH	PF05066.13	2.3e-18	1	1
ENSMUSP00000105413	HARE-HTH	PF05066.13	6.2e-18	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000144722	-	498	-	-	- (aa)	-	-
ENSMUST00000109790	-	6968	-	ENSMUSP00000105413	1514 (aa)	-	P59598
ENSMUST00000227428	-	6981	XM_006499330	ENSMUSP00000154224	1513 (aa)	XP_006499393	A0A2I3BQW0
ENSMUST00000138571	-	717	-	-	- (aa)	-	-
ENSMUST00000123215	-	355	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000042548's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000042548's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000042548	Asxl1	100	73.623	ENSG00000171456	ASXL1	100	98.246	Homo_sapiens
ENSMUSG00000042548	Asxl1	100	71.014	ENSAMEG00000013339	ASXL1	100	71.014	Ailuropoda_melanoleuca
ENSMUSG00000042548	Asxl1	100	73.623	ENSANAG00000032163	ASXL1	100	98.246	Aotus_nancymaae
ENSMUSG00000042548	Asxl1	100	70.634	ENSBTAG00000031402	ASXL1	100	70.634	Bos_taurus
ENSMUSG00000042548	Asxl1	100	73.528	ENSCJAG00000020708	ASXL1	100	96.491	Callithrix_jacchus
ENSMUSG00000042548	Asxl1	98	71.447	ENSCAFG00000007219	ASXL1	100	71.447	Canis_familiaris
ENSMUSG00000042548	Asxl1	99	71.644	ENSCAFG00020004387	ASXL1	100	71.644	Canis_lupus_dingo
ENSMUSG00000042548	Asxl1	100	70.155	ENSCHIG00000025369	ASXL1	100	70.155	Capra_hircus
ENSMUSG00000042548	Asxl1	99	73.753	ENSTSYG00000006907	ASXL1	100	73.753	Carlito_syrichta
ENSMUSG00000042548	Asxl1	98	72.391	ENSCPOG00000040350	ASXL1	100	72.391	Cavia_porcellus
ENSMUSG00000042548	Asxl1	100	73.752	ENSCCAG00000023224	ASXL1	100	98.246	Cebus_capucinus
ENSMUSG00000042548	Asxl1	100	73.575	ENSCATG00000034343	ASXL1	100	98.246	Cercocebus_atys
ENSMUSG00000042548	Asxl1	100	72.763	ENSCLAG00000017264	ASXL1	100	72.763	Chinchilla_lanigera
ENSMUSG00000042548	Asxl1	100	73.428	ENSCSAG00000012615	ASXL1	100	73.428	Chlorocebus_sabaeus
ENSMUSG00000042548	Asxl1	56	93.160	ENSCHOG00000007774	-	89	93.160	Choloepus_hoffmanni
ENSMUSG00000042548	Asxl1	87	70.410	ENSCPBG00000027473	ASXL1	86	69.829	Chrysemys_picta_bellii
ENSMUSG00000042548	Asxl1	99	73.084	ENSCANG00000030372	ASXL1	100	98.246	Colobus_angolensis_palliatus
ENSMUSG00000042548	Asxl1	100	85.339	ENSCGRG00001002670	Asxl1	100	85.339	Cricetulus_griseus_chok1gshd
ENSMUSG00000042548	Asxl1	99	85.153	ENSCGRG00000010091	Asxl1	100	85.153	Cricetulus_griseus_crigri
ENSMUSG00000042548	Asxl1	99	63.773	ENSETEG00000011100	ASXL1	100	64.356	Echinops_telfairi
ENSMUSG00000042548	Asxl1	100	72.992	ENSEASG00005003865	ASXL1	100	72.992	Equus_asinus_asinus
ENSMUSG00000042548	Asxl1	100	73.074	ENSECAG00000022110	ASXL1	100	73.074	Equus_caballus
ENSMUSG00000042548	Asxl1	100	71.806	ENSFCAG00000001908	ASXL1	100	71.806	Felis_catus
ENSMUSG00000042548	Asxl1	78	73.430	ENSFALG00000005409	ASXL1	83	67.028	Ficedula_albicollis
ENSMUSG00000042548	Asxl1	77	74.313	ENSGALG00000006612	ASXL1	88	65.547	Gallus_gallus
ENSMUSG00000042548	Asxl1	87	69.749	ENSGAGG00000020819	ASXL1	86	69.170	Gopherus_agassizii
ENSMUSG00000042548	Asxl1	99	73.163	ENSGGOG00000003328	ASXL1	100	98.246	Gorilla_gorilla
ENSMUSG00000042548	Asxl1	99	73.408	ENSHGLG00100019165	ASXL1	99	73.228	Heterocephalus_glaber_male
ENSMUSG00000042548	Asxl1	98	74.306	ENSSTOG00000027081	ASXL1	100	74.174	Ictidomys_tridecemlineatus
ENSMUSG00000042548	Asxl1	53	65.000	ENSLACG00000002220	ASXL1	56	52.469	Latimeria_chalumnae
ENSMUSG00000042548	Asxl1	66	57.344	ENSLOCG00000005771	asxl1	70	59.288	Lepisosteus_oculatus
ENSMUSG00000042548	Asxl1	100	73.299	ENSMFAG00000029400	ASXL1	100	98.246	Macaca_fascicularis
ENSMUSG00000042548	Asxl1	100	73.428	ENSMMUG00000007117	ASXL1	100	98.246	Macaca_mulatta
ENSMUSG00000042548	Asxl1	99	73.145	ENSMNEG00000031201	ASXL1	100	98.246	Macaca_nemestrina
ENSMUSG00000042548	Asxl1	99	73.163	ENSMLEG00000024749	ASXL1	100	98.246	Mandrillus_leucophaeus
ENSMUSG00000042548	Asxl1	77	73.798	ENSMGAG00000007588	ASXL1	90	64.520	Meleagris_gallopavo
ENSMUSG00000042548	Asxl1	100	73.234	ENSMICG00000038277	ASXL1	100	73.882	Microcebus_murinus
ENSMUSG00000042548	Asxl1	98	57.189	ENSMODG00000019457	ASXL1	100	57.308	Monodelphis_domestica
ENSMUSG00000042548	Asxl1	100	97.886	MGP_CAROLIEiJ_G0024488	Asxl1	100	97.886	Mus_caroli
ENSMUSG00000042548	Asxl1	100	94.284	MGP_PahariEiJ_G0025931	Asxl1	100	94.284	Mus_pahari
ENSMUSG00000042548	Asxl1	100	99.273	MGP_SPRETEiJ_G0025409	Asxl1	100	99.273	Mus_spretus
ENSMUSG00000042548	Asxl1	98	70.395	ENSMPUG00000017872	ASXL1	100	70.395	Mustela_putorius_furo
ENSMUSG00000042548	Asxl1	100	71.020	ENSMLUG00000001036	ASXL1	100	70.798	Myotis_lucifugus
ENSMUSG00000042548	Asxl1	99	73.788	ENSNLEG00000009794	ASXL1	100	98.246	Nomascus_leucogenys
ENSMUSG00000042548	Asxl1	99	67.599	ENSOPRG00000016789	ASXL1	99	67.599	Ochotona_princeps
ENSMUSG00000042548	Asxl1	100	72.273	ENSOGAG00000008413	ASXL1	100	73.052	Otolemur_garnettii
ENSMUSG00000042548	Asxl1	99	73.622	ENSPPAG00000028038	ASXL1	100	98.246	Pan_paniscus
ENSMUSG00000042548	Asxl1	100	72.065	ENSPPRG00000009404	ASXL1	100	72.065	Panthera_pardus
ENSMUSG00000042548	Asxl1	100	73.947	ENSPTRG00000013377	ASXL1	100	98.246	Pan_troglodytes
ENSMUSG00000042548	Asxl1	100	73.364	ENSPANG00000025544	ASXL1	100	98.246	Papio_anubis
ENSMUSG00000042548	Asxl1	88	64.394	ENSPSIG00000002077	ASXL1	89	64.773	Pelodiscus_sinensis
ENSMUSG00000042548	Asxl1	100	57.746	ENSPCIG00000025336	ASXL1	100	58.160	Phascolarctos_cinereus
ENSMUSG00000042548	Asxl1	100	73.834	ENSPCOG00000020621	ASXL1	99	74.482	Propithecus_coquereli
ENSMUSG00000042548	Asxl1	99	70.565	ENSPVAG00000008048	ASXL1	100	70.565	Pteropus_vampyrus
ENSMUSG00000042548	Asxl1	99	87.699	ENSRNOG00000061603	Asxl1	100	87.699	Rattus_norvegicus
ENSMUSG00000042548	Asxl1	99	73.079	ENSRROG00000000172	ASXL1	100	98.246	Rhinopithecus_roxellana
ENSMUSG00000042548	Asxl1	99	72.936	ENSSBOG00000023781	ASXL1	100	98.246	Saimiri_boliviensis_boliviensis
ENSMUSG00000042548	Asxl1	99	64.351	ENSSARG00000001587	ASXL1	100	64.679	Sorex_araneus
ENSMUSG00000042548	Asxl1	50	66.667	ENSSPAG00000009330	asxl1	52	66.667	Stegastes_partitus
ENSMUSG00000042548	Asxl1	100	71.216	ENSSSCG00000007248	ASXL1	100	71.216	Sus_scrofa
ENSMUSG00000042548	Asxl1	72	79.288	ENSTBEG00000001054	-	73	79.288	Tupaia_belangeri
ENSMUSG00000042548	Asxl1	99	69.830	ENSTTRG00000007957	ASXL1	100	69.830	Tursiops_truncatus
ENSMUSG00000042548	Asxl1	99	68.717	ENSUMAG00000024178	ASXL1	99	68.717	Ursus_maritimus
ENSMUSG00000042548	Asxl1	79	73.371	ENSVPAG00000006169	ASXL1	78	74.336	Vicugna_pacos
ENSMUSG00000042548	Asxl1	90	92.442	ENSVVUG00000005207	ASXL1	98	92.442	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000790	nuclear chromatin	21873635.	IBA	Component
GO:0000902	cell morphogenesis	19861679.	IMP	Process
GO:0003007	heart morphogenesis	24860998.	IMP	Process
GO:0003677	DNA binding	-	IEA	Function
GO:0003682	chromatin binding	21873635.	IBA	Function
GO:0003713	transcription coactivator activity	16606617.	IDA	Function
GO:0005515	protein binding	16606617.24216483.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	24216483.	IDA	Component
GO:0006325	chromatin organization	-	IEA	Process
GO:0006351	transcription, DNA-templated	-	IEA	Process
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0009887	animal organ morphogenesis	21873635.	IBA	Process
GO:0009887	animal organ morphogenesis	19861679.	IMP	Process
GO:0030097	hemopoiesis	19861679.	IMP	Process
GO:0032526	response to retinoic acid	16606617.	IDA	Process
GO:0035359	negative regulation of peroxisome proliferator activated receptor signaling pathway	21047783.	IDA	Process
GO:0035517	PR-DUB complex	21873635.	IBA	Component
GO:0035517	PR-DUB complex	-	ISO	Component
GO:0035522	monoubiquitinated histone H2A deubiquitination	-	ISO	Process
GO:0042974	retinoic acid receptor binding	16606617.	IDA	Function
GO:0042975	peroxisome proliferator activated receptor binding	21873635.	IBA	Function
GO:0042975	peroxisome proliferator activated receptor binding	21047783.	IDA	Function
GO:0045599	negative regulation of fat cell differentiation	21047783.	IDA	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	16606617.	IDA	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0048386	positive regulation of retinoic acid receptor signaling pathway	16606617.	IDA	Process
GO:0048534	hematopoietic or lymphoid organ development	19861679.	IMP	Process
GO:0048538	thymus development	19861679.	IMP	Process
GO:0048539	bone marrow development	19861679.	IMP	Process
GO:0048872	homeostasis of number of cells	19861679.	IMP	Process
GO:0060348	bone development	22876197.	IMP	Process
GO:0060430	lung saccule development	24860998.	IMP	Process