EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000042650 (Gene tree)
Gene ID: 268420
Gene Symbol: Alkbh5
Alias: Abh5|Ofoxd
Full Name: alkB homolog 5%2C RNA demethylase
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 22132 bases
Position: chr11:60536381-60558512
Accession: 2144489
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000049116	2OG-FeII_Oxy_2	PF13532.6	2.4e-10	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000134770	-	624	-	-	- (aa)	-	-
ENSMUST00000044250	-	5730	-	ENSMUSP00000049116	395 (aa)	-	Q3TSG4

Gene Model

Click here to download ENSMUSG00000042650's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000042650's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000042650	Alkbh5	100	96.962	ENSG00000091542	ALKBH5	100	96.962	Homo_sapiens
ENSMUSG00000042650	Alkbh5	99	64.051	ENSAPOG00000009959	alkbh5	99	63.959	Acanthochromis_polyacanthus
ENSMUSG00000042650	Alkbh5	89	96.011	ENSAMEG00000004956	ALKBH5	97	96.011	Ailuropoda_melanoleuca
ENSMUSG00000042650	Alkbh5	99	64.051	ENSACIG00000017828	alkbh5	99	63.659	Amphilophus_citrinellus
ENSMUSG00000042650	Alkbh5	99	64.213	ENSAOCG00000022195	alkbh5	99	64.467	Amphiprion_ocellaris
ENSMUSG00000042650	Alkbh5	99	63.706	ENSAPEG00000022697	alkbh5	99	63.613	Amphiprion_percula
ENSMUSG00000042650	Alkbh5	99	63.706	ENSATEG00000007186	alkbh5	99	63.544	Anabas_testudineus
ENSMUSG00000042650	Alkbh5	99	76.866	ENSACAG00000009646	ALKBH5	99	77.500	Anolis_carolinensis
ENSMUSG00000042650	Alkbh5	100	96.709	ENSANAG00000032817	ALKBH5	100	96.709	Aotus_nancymaae
ENSMUSG00000042650	Alkbh5	99	63.706	ENSACLG00000002713	alkbh5	99	63.198	Astatotilapia_calliptera
ENSMUSG00000042650	Alkbh5	99	63.910	ENSAMXG00000037092	alkbh5	99	62.624	Astyanax_mexicanus
ENSMUSG00000042650	Alkbh5	100	94.430	ENSBTAG00000025046	ALKBH5	100	94.684	Bos_taurus
ENSMUSG00000042650	Alkbh5	100	96.203	ENSCJAG00000000974	-	100	96.203	Callithrix_jacchus
ENSMUSG00000042650	Alkbh5	100	92.911	ENSCJAG00000046984	-	100	92.911	Callithrix_jacchus
ENSMUSG00000042650	Alkbh5	98	96.144	ENSCAFG00000018315	ALKBH5	91	94.937	Canis_familiaris
ENSMUSG00000042650	Alkbh5	100	96.456	ENSCAFG00020021061	ALKBH5	100	96.456	Canis_lupus_dingo
ENSMUSG00000042650	Alkbh5	100	94.937	ENSCHIG00000027248	ALKBH5	100	94.937	Capra_hircus
ENSMUSG00000042650	Alkbh5	59	97.009	ENSTSYG00000012134	ALKBH5	91	97.009	Carlito_syrichta
ENSMUSG00000042650	Alkbh5	100	96.962	ENSCPOG00000037709	ALKBH5	100	96.962	Cavia_porcellus
ENSMUSG00000042650	Alkbh5	100	96.456	ENSCCAG00000020369	ALKBH5	100	96.456	Cebus_capucinus
ENSMUSG00000042650	Alkbh5	100	91.139	ENSCATG00000041372	ALKBH5	100	91.139	Cercocebus_atys
ENSMUSG00000042650	Alkbh5	100	93.924	ENSCLAG00000003812	ALKBH5	100	93.924	Chinchilla_lanigera
ENSMUSG00000042650	Alkbh5	100	96.962	ENSCSAG00000008183	ALKBH5	100	96.962	Chlorocebus_sabaeus
ENSMUSG00000042650	Alkbh5	99	79.750	ENSCPBG00000020984	ALKBH5	99	79.653	Chrysemys_picta_bellii
ENSMUSG00000042650	Alkbh5	100	93.418	ENSCANG00000033849	ALKBH5	100	92.911	Colobus_angolensis_palliatus
ENSMUSG00000042650	Alkbh5	100	97.975	ENSCGRG00001004268	Alkbh5	100	97.975	Cricetulus_griseus_chok1gshd
ENSMUSG00000042650	Alkbh5	99	63.636	ENSCSEG00000002327	alkbh5	99	63.544	Cynoglossus_semilaevis
ENSMUSG00000042650	Alkbh5	99	64.213	ENSCVAG00000022772	alkbh5	99	64.213	Cyprinodon_variegatus
ENSMUSG00000042650	Alkbh5	99	65.743	ENSDARG00000063003	alkbh5	99	65.491	Danio_rerio
ENSMUSG00000042650	Alkbh5	85	97.033	ENSDNOG00000007935	ALKBH5	100	97.033	Dasypus_novemcinctus
ENSMUSG00000042650	Alkbh5	100	96.203	ENSEASG00005017626	ALKBH5	100	96.203	Equus_asinus_asinus
ENSMUSG00000042650	Alkbh5	100	96.456	ENSECAG00000018358	ALKBH5	100	96.456	Equus_caballus
ENSMUSG00000042650	Alkbh5	98	91.260	ENSEEUG00000010618	ALKBH5	87	91.026	Erinaceus_europaeus
ENSMUSG00000042650	Alkbh5	99	64.467	ENSELUG00000016444	alkbh5	99	64.975	Esox_lucius
ENSMUSG00000042650	Alkbh5	100	96.203	ENSFCAG00000033826	ALKBH5	100	96.203	Felis_catus
ENSMUSG00000042650	Alkbh5	86	85.000	ENSFALG00000013746	ALKBH5	95	85.882	Ficedula_albicollis
ENSMUSG00000042650	Alkbh5	100	87.089	ENSFDAG00000011356	ALKBH5	100	87.089	Fukomys_damarensis
ENSMUSG00000042650	Alkbh5	85	66.369	ENSFHEG00000017211	alkbh5	88	64.776	Fundulus_heteroclitus
ENSMUSG00000042650	Alkbh5	99	61.809	ENSGMOG00000007690	alkbh5	99	60.298	Gadus_morhua
ENSMUSG00000042650	Alkbh5	99	77.975	ENSGALG00000043693	ALKBH5	99	79.241	Gallus_gallus
ENSMUSG00000042650	Alkbh5	99	62.657	ENSGAFG00000013091	alkbh5	94	63.291	Gambusia_affinis
ENSMUSG00000042650	Alkbh5	99	61.013	ENSGACG00000016621	alkbh5	99	60.759	Gasterosteus_aculeatus
ENSMUSG00000042650	Alkbh5	99	80.808	ENSGAGG00000007453	ALKBH5	99	80.100	Gopherus_agassizii
ENSMUSG00000042650	Alkbh5	99	96.931	ENSGGOG00000016223	ALKBH5	100	96.931	Gorilla_gorilla
ENSMUSG00000042650	Alkbh5	99	63.959	ENSHBUG00000018324	alkbh5	99	63.452	Haplochromis_burtoni
ENSMUSG00000042650	Alkbh5	83	97.554	ENSHGLG00000013317	-	100	97.554	Heterocephalus_glaber_female
ENSMUSG00000042650	Alkbh5	100	89.114	ENSHGLG00100008720	-	100	89.114	Heterocephalus_glaber_male
ENSMUSG00000042650	Alkbh5	99	60.406	ENSHCOG00000010816	alkbh5	99	60.253	Hippocampus_comes
ENSMUSG00000042650	Alkbh5	100	96.456	ENSSTOG00000024574	ALKBH5	100	96.456	Ictidomys_tridecemlineatus
ENSMUSG00000042650	Alkbh5	99	62.944	ENSKMAG00000008615	alkbh5	99	62.879	Kryptolebias_marmoratus
ENSMUSG00000042650	Alkbh5	99	61.832	ENSLBEG00000007886	alkbh5	99	61.250	Labrus_bergylta
ENSMUSG00000042650	Alkbh5	98	70.918	ENSLOCG00000005006	alkbh5	83	77.326	Lepisosteus_oculatus
ENSMUSG00000042650	Alkbh5	100	95.443	ENSLAFG00000015521	ALKBH5	100	95.443	Loxodonta_africana
ENSMUSG00000042650	Alkbh5	100	96.962	ENSMFAG00000001517	ALKBH5	100	96.962	Macaca_fascicularis
ENSMUSG00000042650	Alkbh5	100	96.962	ENSMNEG00000037007	ALKBH5	100	96.962	Macaca_nemestrina
ENSMUSG00000042650	Alkbh5	88	96.542	ENSMLEG00000036607	ALKBH5	100	96.542	Mandrillus_leucophaeus
ENSMUSG00000042650	Alkbh5	99	63.636	ENSMAMG00000007695	alkbh5	99	63.291	Mastacembelus_armatus
ENSMUSG00000042650	Alkbh5	99	63.706	ENSMZEG00005012673	alkbh5	99	63.198	Maylandia_zebra
ENSMUSG00000042650	Alkbh5	100	97.468	ENSMAUG00000012991	Alkbh5	100	97.468	Mesocricetus_auratus
ENSMUSG00000042650	Alkbh5	100	96.709	ENSMICG00000044316	ALKBH5	100	96.709	Microcebus_murinus
ENSMUSG00000042650	Alkbh5	100	98.228	ENSMOCG00000002615	Alkbh5	100	98.228	Microtus_ochrogaster
ENSMUSG00000042650	Alkbh5	99	61.558	ENSMMOG00000020265	alkbh5	99	62.095	Mola_mola
ENSMUSG00000042650	Alkbh5	100	88.101	ENSMODG00000013731	ALKBH5	100	87.848	Monodelphis_domestica
ENSMUSG00000042650	Alkbh5	99	63.959	ENSMALG00000018344	alkbh5	99	63.027	Monopterus_albus
ENSMUSG00000042650	Alkbh5	100	100.000	MGP_CAROLIEiJ_G0016458	Alkbh5	100	100.000	Mus_caroli
ENSMUSG00000042650	Alkbh5	100	99.747	MGP_PahariEiJ_G0017588	Alkbh5	100	99.747	Mus_pahari
ENSMUSG00000042650	Alkbh5	100	100.000	MGP_SPRETEiJ_G0017293	Alkbh5	100	100.000	Mus_spretus
ENSMUSG00000042650	Alkbh5	100	96.456	ENSMPUG00000000032	ALKBH5	100	96.456	Mustela_putorius_furo
ENSMUSG00000042650	Alkbh5	100	96.709	ENSMLUG00000001337	ALKBH5	100	96.709	Myotis_lucifugus
ENSMUSG00000042650	Alkbh5	100	96.456	ENSNGAG00000011033	Alkbh5	100	96.456	Nannospalax_galili
ENSMUSG00000042650	Alkbh5	99	64.213	ENSNBRG00000009936	alkbh5	99	63.452	Neolamprologus_brichardi
ENSMUSG00000042650	Alkbh5	100	91.139	ENSNLEG00000035985	ALKBH5	100	91.139	Nomascus_leucogenys
ENSMUSG00000042650	Alkbh5	100	86.582	ENSMEUG00000010609	ALKBH5	88	86.582	Notamacropus_eugenii
ENSMUSG00000042650	Alkbh5	100	96.962	ENSODEG00000005760	ALKBH5	100	96.962	Octodon_degus
ENSMUSG00000042650	Alkbh5	99	64.213	ENSONIG00000003181	alkbh5	99	63.959	Oreochromis_niloticus
ENSMUSG00000042650	Alkbh5	99	90.306	ENSOCUG00000009240	ALKBH5	87	90.306	Oryctolagus_cuniculus
ENSMUSG00000042650	Alkbh5	100	63.636	ENSORLG00000009235	alkbh5	100	63.524	Oryzias_latipes
ENSMUSG00000042650	Alkbh5	100	63.384	ENSORLG00020011448	alkbh5	100	63.275	Oryzias_latipes_hni
ENSMUSG00000042650	Alkbh5	100	63.636	ENSORLG00015010675	alkbh5	100	63.524	Oryzias_latipes_hsok
ENSMUSG00000042650	Alkbh5	99	64.721	ENSOMEG00000020820	alkbh5	99	64.339	Oryzias_melastigma
ENSMUSG00000042650	Alkbh5	100	96.962	ENSPPAG00000030479	ALKBH5	100	96.962	Pan_paniscus
ENSMUSG00000042650	Alkbh5	100	96.203	ENSPPRG00000017981	ALKBH5	100	96.203	Panthera_pardus
ENSMUSG00000042650	Alkbh5	100	96.962	ENSPTRG00000024216	ALKBH5	100	96.962	Pan_troglodytes
ENSMUSG00000042650	Alkbh5	100	96.962	ENSPANG00000023682	ALKBH5	100	96.962	Papio_anubis
ENSMUSG00000042650	Alkbh5	93	65.854	ENSPKIG00000017327	alkbh5	96	65.323	Paramormyrops_kingsleyae
ENSMUSG00000042650	Alkbh5	99	66.162	ENSPKIG00000013829	ALKBH5	99	67.424	Paramormyrops_kingsleyae
ENSMUSG00000042650	Alkbh5	99	80.605	ENSPSIG00000009583	ALKBH5	99	79.800	Pelodiscus_sinensis
ENSMUSG00000042650	Alkbh5	99	62.183	ENSPMGG00000009517	alkbh5	99	63.889	Periophthalmus_magnuspinnatus
ENSMUSG00000042650	Alkbh5	100	88.861	ENSPCIG00000001861	ALKBH5	100	88.608	Phascolarctos_cinereus
ENSMUSG00000042650	Alkbh5	99	63.131	ENSPFOG00000004159	alkbh5	99	63.728	Poecilia_formosa
ENSMUSG00000042650	Alkbh5	99	63.452	ENSPLAG00000010799	alkbh5	99	64.051	Poecilia_latipinna
ENSMUSG00000042650	Alkbh5	99	63.452	ENSPMEG00000020572	alkbh5	99	64.051	Poecilia_mexicana
ENSMUSG00000042650	Alkbh5	99	63.706	ENSPREG00000000055	alkbh5	99	64.304	Poecilia_reticulata
ENSMUSG00000042650	Alkbh5	99	75.888	ENSPCAG00000011113	ALKBH5	88	75.888	Procavia_capensis
ENSMUSG00000042650	Alkbh5	100	96.709	ENSPCOG00000000705	ALKBH5	100	96.709	Propithecus_coquereli
ENSMUSG00000042650	Alkbh5	98	96.891	ENSPVAG00000005776	ALKBH5	88	96.891	Pteropus_vampyrus
ENSMUSG00000042650	Alkbh5	99	63.959	ENSPNYG00000020156	alkbh5	99	63.452	Pundamilia_nyererei
ENSMUSG00000042650	Alkbh5	99	63.317	ENSPNAG00000014968	alkbh5	99	63.636	Pygocentrus_nattereri
ENSMUSG00000042650	Alkbh5	100	99.494	ENSRNOG00000028341	Alkbh5	100	99.494	Rattus_norvegicus
ENSMUSG00000042650	Alkbh5	100	96.962	ENSRBIG00000029698	ALKBH5	100	96.962	Rhinopithecus_bieti
ENSMUSG00000042650	Alkbh5	100	96.962	ENSRROG00000033654	ALKBH5	100	96.962	Rhinopithecus_roxellana
ENSMUSG00000042650	Alkbh5	86	90.265	ENSSBOG00000023339	ALKBH5	99	90.000	Saimiri_boliviensis_boliviensis
ENSMUSG00000042650	Alkbh5	98	88.689	ENSSHAG00000005278	ALKBH5	93	88.432	Sarcophilus_harrisii
ENSMUSG00000042650	Alkbh5	78	69.470	ENSSFOG00015023592	ALKBH5	90	69.350	Scleropages_formosus
ENSMUSG00000042650	Alkbh5	99	67.089	ENSSFOG00015008148	alkbh5	99	66.835	Scleropages_formosus
ENSMUSG00000042650	Alkbh5	99	63.959	ENSSMAG00000000195	alkbh5	99	63.198	Scophthalmus_maximus
ENSMUSG00000042650	Alkbh5	99	63.544	ENSSDUG00000015880	alkbh5	99	63.797	Seriola_dumerili
ENSMUSG00000042650	Alkbh5	99	62.944	ENSSLDG00000022333	alkbh5	99	63.198	Seriola_lalandi_dorsalis
ENSMUSG00000042650	Alkbh5	98	79.177	ENSSARG00000009722	ALKBH5	83	78.974	Sorex_araneus
ENSMUSG00000042650	Alkbh5	99	79.950	ENSSPUG00000004432	ALKBH5	99	80.151	Sphenodon_punctatus
ENSMUSG00000042650	Alkbh5	99	64.213	ENSSPAG00000011009	alkbh5	99	64.810	Stegastes_partitus
ENSMUSG00000042650	Alkbh5	100	93.671	ENSSSCG00000035120	ALKBH5	100	93.924	Sus_scrofa
ENSMUSG00000042650	Alkbh5	99	77.525	ENSTGUG00000007229	ALKBH5	99	79.293	Taeniopygia_guttata
ENSMUSG00000042650	Alkbh5	99	60.759	ENSTRUG00000013324	alkbh5	99	60.859	Takifugu_rubripes
ENSMUSG00000042650	Alkbh5	99	61.965	ENSTNIG00000008275	alkbh5	99	61.869	Tetraodon_nigroviridis
ENSMUSG00000042650	Alkbh5	98	95.078	ENSTTRG00000008156	ALKBH5	87	95.337	Tursiops_truncatus
ENSMUSG00000042650	Alkbh5	100	96.456	ENSUAMG00000010729	ALKBH5	100	96.456	Ursus_americanus
ENSMUSG00000042650	Alkbh5	92	81.768	ENSVPAG00000008327	ALKBH5	87	81.768	Vicugna_pacos
ENSMUSG00000042650	Alkbh5	100	91.646	ENSVVUG00000030107	ALKBH5	100	91.646	Vulpes_vulpes
ENSMUSG00000042650	Alkbh5	99	63.038	ENSXETG00000005769	alkbh5	99	62.785	Xenopus_tropicalis
ENSMUSG00000042650	Alkbh5	99	63.198	ENSXCOG00000005331	alkbh5	99	63.317	Xiphophorus_couchianus
ENSMUSG00000042650	Alkbh5	99	62.944	ENSXMAG00000015514	alkbh5	95	63.065	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001666	response to hypoxia	-	ISO	Process
GO:0004622	lysophospholipase activity	16818490.	IDA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005794	Golgi apparatus	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006397	mRNA processing	21873635.	IBA	Process
GO:0006397	mRNA processing	-	ISO	Process
GO:0006406	mRNA export from nucleus	21873635.	IBA	Process
GO:0006406	mRNA export from nucleus	-	ISO	Process
GO:0007283	spermatogenesis	23177736.29279410.	IMP	Process
GO:0016491	oxidoreductase activity	-	IEA	Function
GO:0016607	nuclear speck	29279410.	IMP	Component
GO:0016607	nuclear speck	-	ISO	Component
GO:0016706	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	-	ISO	Function
GO:0030154	cell differentiation	-	IEA	Process
GO:0035515	oxidative RNA demethylase activity	-	IEA	Function
GO:0035553	oxidative single-stranded RNA demethylation	21873635.	IBA	Process
GO:0035553	oxidative single-stranded RNA demethylation	29279410.	IMP	Process
GO:0035553	oxidative single-stranded RNA demethylation	-	ISO	Process
GO:0043488	regulation of mRNA stability	29279410.	IMP	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0051213	dioxygenase activity	-	IEA	Function
GO:0055114	oxidation-reduction process	-	IEA	Process
GO:1990931	RNA N6-methyladenosine dioxygenase activity	29279410.	IMP	Function
GO:1990931	RNA N6-methyladenosine dioxygenase activity	-	ISO	Function