EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000042694 (Gene tree)
Gene ID: 108689
Gene Symbol: Stn1
Alias: 0610009H20Rik|2310057J23Rik|Obfc1
Full Name: STN1%2C CST complex subunit
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 36475 bases
Position: chr19:47501033-47537507
Accession: 1915581
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000138727	tRNA_anti-codon	PF01336.25	6.7e-07	1	1
ENSMUSP00000040944	tRNA_anti-codon	PF01336.25	7.8e-07	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000182714	-	690	-	-	- (aa)	-	-
ENSMUST00000183004	-	1107	-	-	- (aa)	-	-
ENSMUST00000182291	-	748	-	ENSMUSP00000138553	99 (aa)	-	S4R297
ENSMUST00000182808	-	1618	XM_006526598	ENSMUSP00000138727	351 (aa)	XP_006526661	Q3UXU8
ENSMUST00000182654	-	430	-	-	- (aa)	-	-
ENSMUST00000049369	-	1992	-	ENSMUSP00000040944	378 (aa)	-	Q8K2X3
ENSMUST00000182251	-	523	-	-	- (aa)	-	-
ENSMUST00000182873	-	802	-	-	- (aa)	-	-
ENSMUST00000182431	-	558	-	-	- (aa)	-	-
ENSMUST00000183283	-	132	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000042694's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000042694's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000042694	Stn1	98	70.350	ENSG00000107960	STN1	100	70.350	Homo_sapiens
ENSMUSG00000042694	Stn1	99	64.721	ENSAMEG00000017971	STN1	99	64.721	Ailuropoda_melanoleuca
ENSMUSG00000042694	Stn1	98	55.108	ENSAPLG00000006661	STN1	100	55.108	Anas_platyrhynchos
ENSMUSG00000042694	Stn1	98	46.092	ENSACAG00000004954	STN1	100	46.092	Anolis_carolinensis
ENSMUSG00000042694	Stn1	98	69.003	ENSANAG00000038147	STN1	100	69.003	Aotus_nancymaae
ENSMUSG00000042694	Stn1	99	66.844	ENSBTAG00000015019	STN1	100	66.846	Bos_taurus
ENSMUSG00000042694	Stn1	98	69.003	ENSCJAG00000040388	STN1	100	69.003	Callithrix_jacchus
ENSMUSG00000042694	Stn1	98	66.310	ENSCAFG00000010483	STN1	100	66.310	Canis_familiaris
ENSMUSG00000042694	Stn1	98	66.129	ENSCAFG00020010650	STN1	100	66.129	Canis_lupus_dingo
ENSMUSG00000042694	Stn1	99	59.151	ENSCHIG00000003253	-	100	59.682	Capra_hircus
ENSMUSG00000042694	Stn1	98	66.307	ENSCHIG00000019425	-	100	66.846	Capra_hircus
ENSMUSG00000042694	Stn1	86	67.692	ENSCAPG00000016278	STN1	99	67.692	Cavia_aperea
ENSMUSG00000042694	Stn1	100	67.989	ENSCPOG00000006273	STN1	100	67.989	Cavia_porcellus
ENSMUSG00000042694	Stn1	98	69.811	ENSCCAG00000020507	STN1	100	69.003	Cebus_capucinus
ENSMUSG00000042694	Stn1	98	69.003	ENSCATG00000043103	STN1	100	69.003	Cercocebus_atys
ENSMUSG00000042694	Stn1	100	66.931	ENSCLAG00000001617	STN1	100	66.931	Chinchilla_lanigera
ENSMUSG00000042694	Stn1	98	69.542	ENSCSAG00000005318	STN1	100	69.542	Chlorocebus_sabaeus
ENSMUSG00000042694	Stn1	98	54.178	ENSCPBG00000024481	STN1	100	54.178	Chrysemys_picta_bellii
ENSMUSG00000042694	Stn1	98	69.272	ENSCANG00000029004	STN1	100	69.272	Colobus_angolensis_palliatus
ENSMUSG00000042694	Stn1	100	69.841	ENSCGRG00001023175	Stn1	100	69.841	Cricetulus_griseus_chok1gshd
ENSMUSG00000042694	Stn1	100	80.423	ENSCGRG00000004324	Stn1	100	80.423	Cricetulus_griseus_crigri
ENSMUSG00000042694	Stn1	95	42.234	ENSDARG00000007734	stn1	96	42.234	Danio_rerio
ENSMUSG00000042694	Stn1	91	66.250	ENSDNOG00000011022	STN1	99	66.250	Dasypus_novemcinctus
ENSMUSG00000042694	Stn1	94	68.908	ENSDORG00000005994	Stn1	100	68.733	Dipodomys_ordii
ENSMUSG00000042694	Stn1	97	61.247	ENSETEG00000013967	STN1	99	61.247	Echinops_telfairi
ENSMUSG00000042694	Stn1	98	68.817	ENSEASG00005015134	STN1	100	68.817	Equus_asinus_asinus
ENSMUSG00000042694	Stn1	98	68.011	ENSECAG00000023477	STN1	100	68.548	Equus_caballus
ENSMUSG00000042694	Stn1	94	67.227	ENSFCAG00000030378	STN1	100	67.116	Felis_catus
ENSMUSG00000042694	Stn1	98	54.960	ENSFALG00000008791	STN1	100	54.960	Ficedula_albicollis
ENSMUSG00000042694	Stn1	100	65.608	ENSFDAG00000007528	STN1	100	65.608	Fukomys_damarensis
ENSMUSG00000042694	Stn1	98	54.301	ENSGALG00000008304	STN1	100	54.301	Gallus_gallus
ENSMUSG00000042694	Stn1	90	50.794	ENSGAGG00000003673	STN1	93	50.794	Gopherus_agassizii
ENSMUSG00000042694	Stn1	98	70.081	ENSGGOG00000008979	STN1	100	70.081	Gorilla_gorilla
ENSMUSG00000042694	Stn1	100	65.608	ENSHGLG00000002775	OBFC1	100	65.608	Heterocephalus_glaber_female
ENSMUSG00000042694	Stn1	100	65.344	ENSHGLG00100012701	STN1	100	65.344	Heterocephalus_glaber_male
ENSMUSG00000042694	Stn1	96	41.081	ENSHCOG00000002048	stn1	98	41.081	Hippocampus_comes
ENSMUSG00000042694	Stn1	100	67.725	ENSSTOG00000011905	STN1	100	67.725	Ictidomys_tridecemlineatus
ENSMUSG00000042694	Stn1	100	65.435	ENSJJAG00000020389	Stn1	100	65.435	Jaculus_jaculus
ENSMUSG00000042694	Stn1	97	45.479	ENSLACG00000012381	STN1	99	45.479	Latimeria_chalumnae
ENSMUSG00000042694	Stn1	95	66.575	ENSLAFG00000004232	STN1	99	65.879	Loxodonta_africana
ENSMUSG00000042694	Stn1	98	69.003	ENSMFAG00000041817	STN1	100	69.003	Macaca_fascicularis
ENSMUSG00000042694	Stn1	98	69.003	ENSMMUG00000015323	STN1	100	69.003	Macaca_mulatta
ENSMUSG00000042694	Stn1	98	69.272	ENSMNEG00000031906	STN1	100	69.272	Macaca_nemestrina
ENSMUSG00000042694	Stn1	98	69.272	ENSMLEG00000040619	STN1	100	69.272	Mandrillus_leucophaeus
ENSMUSG00000042694	Stn1	99	56.349	ENSMGAG00000010550	STN1	99	56.349	Meleagris_gallopavo
ENSMUSG00000042694	Stn1	99	81.649	ENSMAUG00000015671	Stn1	99	81.649	Mesocricetus_auratus
ENSMUSG00000042694	Stn1	98	66.577	ENSMICG00000012547	STN1	100	67.385	Microcebus_murinus
ENSMUSG00000042694	Stn1	100	72.277	ENSMOCG00000009637	Stn1	100	72.277	Microtus_ochrogaster
ENSMUSG00000042694	Stn1	98	58.445	ENSMODG00000011003	STN1	100	58.445	Monodelphis_domestica
ENSMUSG00000042694	Stn1	100	96.561	MGP_CAROLIEiJ_G0023057	Stn1	100	96.561	Mus_caroli
ENSMUSG00000042694	Stn1	100	94.444	MGP_PahariEiJ_G0014547	Stn1	100	94.444	Mus_pahari
ENSMUSG00000042694	Stn1	100	99.471	MGP_SPRETEiJ_G0023978	Stn1	100	99.471	Mus_spretus
ENSMUSG00000042694	Stn1	98	61.995	ENSMPUG00000016800	STN1	100	61.995	Mustela_putorius_furo
ENSMUSG00000042694	Stn1	99	66.754	ENSMLUG00000002037	STN1	99	66.754	Myotis_lucifugus
ENSMUSG00000042694	Stn1	100	73.016	ENSNGAG00000023986	Stn1	100	73.016	Nannospalax_galili
ENSMUSG00000042694	Stn1	98	70.350	ENSNLEG00000015282	STN1	100	70.350	Nomascus_leucogenys
ENSMUSG00000042694	Stn1	98	66.307	ENSOPRG00000010707	STN1	100	66.307	Ochotona_princeps
ENSMUSG00000042694	Stn1	100	61.376	ENSODEG00000007270	STN1	100	61.376	Octodon_degus
ENSMUSG00000042694	Stn1	96	56.906	ENSOANG00000001628	STN1	98	56.906	Ornithorhynchus_anatinus
ENSMUSG00000042694	Stn1	100	70.370	ENSOCUG00000003028	STN1	100	70.370	Oryctolagus_cuniculus
ENSMUSG00000042694	Stn1	96	41.600	ENSORLG00000002353	stn1	99	41.600	Oryzias_latipes
ENSMUSG00000042694	Stn1	96	42.359	ENSORLG00020012935	stn1	98	42.359	Oryzias_latipes_hni
ENSMUSG00000042694	Stn1	96	42.359	ENSORLG00015012154	stn1	98	42.359	Oryzias_latipes_hsok
ENSMUSG00000042694	Stn1	99	65.699	ENSOGAG00000008722	STN1	99	65.699	Otolemur_garnettii
ENSMUSG00000042694	Stn1	99	65.789	ENSOARG00000004883	STN1	99	65.789	Ovis_aries
ENSMUSG00000042694	Stn1	98	70.081	ENSPPAG00000030947	STN1	100	70.081	Pan_paniscus
ENSMUSG00000042694	Stn1	94	67.507	ENSPPRG00000010476	STN1	100	67.385	Panthera_pardus
ENSMUSG00000042694	Stn1	94	66.205	ENSPTIG00000017333	STN1	100	66.133	Panthera_tigris_altaica
ENSMUSG00000042694	Stn1	98	70.081	ENSPTRG00000002919	STN1	100	70.081	Pan_troglodytes
ENSMUSG00000042694	Stn1	98	69.003	ENSPANG00000020926	STN1	100	69.003	Papio_anubis
ENSMUSG00000042694	Stn1	95	40.327	ENSPKIG00000000721	stn1	97	40.327	Paramormyrops_kingsleyae
ENSMUSG00000042694	Stn1	98	52.419	ENSPSIG00000010802	STN1	100	52.419	Pelodiscus_sinensis
ENSMUSG00000042694	Stn1	100	78.100	ENSPEMG00000013944	Stn1	100	78.100	Peromyscus_maniculatus_bairdii
ENSMUSG00000042694	Stn1	97	59.290	ENSPCIG00000024497	STN1	99	59.290	Phascolarctos_cinereus
ENSMUSG00000042694	Stn1	98	70.081	ENSPPYG00000002628	STN1	100	70.081	Pongo_abelii
ENSMUSG00000042694	Stn1	98	68.733	ENSPCOG00000017648	STN1	100	68.733	Propithecus_coquereli
ENSMUSG00000042694	Stn1	98	64.420	ENSPVAG00000004187	STN1	100	64.420	Pteropus_vampyrus
ENSMUSG00000042694	Stn1	100	87.566	ENSRNOG00000020376	Stn1	100	87.566	Rattus_norvegicus
ENSMUSG00000042694	Stn1	98	69.272	ENSRBIG00000039819	STN1	100	69.272	Rhinopithecus_bieti
ENSMUSG00000042694	Stn1	98	69.542	ENSRROG00000013903	STN1	100	69.542	Rhinopithecus_roxellana
ENSMUSG00000042694	Stn1	98	70.350	ENSSBOG00000031516	STN1	100	69.542	Saimiri_boliviensis_boliviensis
ENSMUSG00000042694	Stn1	97	59.401	ENSSHAG00000017550	STN1	99	59.401	Sarcophilus_harrisii
ENSMUSG00000042694	Stn1	96	41.823	ENSSFOG00015004107	stn1	98	41.823	Scleropages_formosus
ENSMUSG00000042694	Stn1	99	66.400	ENSSSCG00000010605	STN1	86	66.400	Sus_scrofa
ENSMUSG00000042694	Stn1	98	54.155	ENSTGUG00000010354	STN1	100	54.155	Taeniopygia_guttata
ENSMUSG00000042694	Stn1	98	44.118	ENSTNIG00000014162	stn1	98	44.118	Tetraodon_nigroviridis
ENSMUSG00000042694	Stn1	65	69.388	ENSTBEG00000000659	STN1	66	69.388	Tupaia_belangeri
ENSMUSG00000042694	Stn1	98	66.307	ENSTTRG00000003375	STN1	100	66.307	Tursiops_truncatus
ENSMUSG00000042694	Stn1	98	61.725	ENSUMAG00000023647	STN1	100	61.725	Ursus_maritimus
ENSMUSG00000042694	Stn1	98	68.194	ENSVPAG00000002530	STN1	100	68.194	Vicugna_pacos
ENSMUSG00000042694	Stn1	99	65.608	ENSVVUG00000004636	-	61	65.608	Vulpes_vulpes
ENSMUSG00000042694	Stn1	94	45.580	ENSXETG00000011402	STN1	99	44.744	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000723	telomere maintenance	-	ISO	Process
GO:0000781	chromosome, telomeric region	-	IEA	Component
GO:0000784	nuclear chromosome, telomeric region	21873635.	IBA	Component
GO:0000784	nuclear chromosome, telomeric region	19854130.	IDA	Component
GO:0000784	nuclear chromosome, telomeric region	-	ISO	Component
GO:0001650	fibrillar center	-	ISO	Component
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003697	single-stranded DNA binding	19119139.	IDA	Function
GO:0005515	protein binding	19119139.19648609.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	19119139.19854130.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	21873635.	IBA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005694	chromosome	-	IEA	Component
GO:0010833	telomere maintenance via telomere lengthening	21873635.	IBA	Process
GO:0010833	telomere maintenance via telomere lengthening	-	ISO	Process
GO:0016233	telomere capping	21873635.	IBA	Process
GO:0032211	negative regulation of telomere maintenance via telomerase	21873635.	IBA	Process
GO:0032211	negative regulation of telomere maintenance via telomerase	-	ISO	Process
GO:0042162	telomeric DNA binding	21873635.	IBA	Function
GO:0042162	telomeric DNA binding	19854130.	IDA	Function
GO:0042162	telomeric DNA binding	-	ISO	Function
GO:0043047	single-stranded telomeric DNA binding	21873635.	IBA	Function
GO:0043047	single-stranded telomeric DNA binding	-	ISO	Function
GO:0043231	intracellular membrane-bounded organelle	-	ISO	Component
GO:0045111	intermediate filament cytoskeleton	-	ISO	Component
GO:0045740	positive regulation of DNA replication	19119139.	IDA	Process
GO:1990879	CST complex	21873635.	IBA	Component
GO:1990879	CST complex	19854130.	IDA	Component
GO:1990879	CST complex	-	ISO	Component