EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000044475 (Gene tree)
Gene ID: 69090
Gene Symbol: Ascc1
Alias: 1810015P09Rik|ASC1p50|CGI-18
Full Name: activating signal cointegrator 1 complex subunit 1
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 97184 bases
Position: chr10:60002805-60099988
Accession: 1916340
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000052351	KH_1	PF00013.29	1e-07	1	1
ENSMUSP00000126301	KH_1	PF00013.29	1e-07	1	1
ENSMUSP00000052351	AKAP7_NLS	PF10469.9	2e-58	1	1
ENSMUSP00000126301	AKAP7_NLS	PF10469.9	2e-58	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000219778	-	1230	-	-	- (aa)	-	-
ENSMUST00000050516	-	1450	XM_006514039	ENSMUSP00000052351	356 (aa)	XP_006514102	Q9D8Z1
ENSMUST00000164083	-	1473	XM_006514040	ENSMUSP00000126301	356 (aa)	XP_006514103	Q9D8Z1

Gene Model

Click here to download ENSMUSG00000044475's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000044475's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000044475	Ascc1	100	86.555	ENSG00000138303	ASCC1	99	88.235	Homo_sapiens
ENSMUSG00000044475	Ascc1	100	52.661	ENSAPOG00000017956	ascc1	100	52.661	Acanthochromis_polyacanthus
ENSMUSG00000044475	Ascc1	100	85.955	ENSAMEG00000017400	ASCC1	94	85.955	Ailuropoda_melanoleuca
ENSMUSG00000044475	Ascc1	100	52.925	ENSACIG00000024515	ascc1	100	52.925	Amphilophus_citrinellus
ENSMUSG00000044475	Ascc1	100	52.941	ENSAOCG00000009038	ascc1	100	52.941	Amphiprion_ocellaris
ENSMUSG00000044475	Ascc1	100	53.073	ENSAPEG00000019742	ascc1	100	53.073	Amphiprion_percula
ENSMUSG00000044475	Ascc1	100	51.667	ENSATEG00000023377	ascc1	100	51.667	Anabas_testudineus
ENSMUSG00000044475	Ascc1	99	62.011	ENSAPLG00000007456	ASCC1	99	62.011	Anas_platyrhynchos
ENSMUSG00000044475	Ascc1	100	61.517	ENSACAG00000001244	ASCC1	97	61.517	Anolis_carolinensis
ENSMUSG00000044475	Ascc1	100	87.115	ENSANAG00000027828	ASCC1	100	87.115	Aotus_nancymaae
ENSMUSG00000044475	Ascc1	100	53.203	ENSACLG00000004955	ascc1	100	53.203	Astatotilapia_calliptera
ENSMUSG00000044475	Ascc1	100	55.989	ENSAMXG00000011705	ascc1	100	55.989	Astyanax_mexicanus
ENSMUSG00000044475	Ascc1	100	84.594	ENSBTAG00000000392	ASCC1	100	84.594	Bos_taurus
ENSMUSG00000044475	Ascc1	100	86.835	ENSCJAG00000007273	ASCC1	100	86.835	Callithrix_jacchus
ENSMUSG00000044475	Ascc1	100	85.154	ENSCAFG00000014415	ASCC1	99	92.268	Canis_familiaris
ENSMUSG00000044475	Ascc1	100	85.434	ENSCAFG00020025090	ASCC1	100	85.434	Canis_lupus_dingo
ENSMUSG00000044475	Ascc1	100	84.314	ENSCHIG00000020844	ASCC1	100	84.314	Capra_hircus
ENSMUSG00000044475	Ascc1	100	86.275	ENSTSYG00000012145	ASCC1	100	86.275	Carlito_syrichta
ENSMUSG00000044475	Ascc1	90	85.938	ENSCAPG00000005505	ASCC1	95	85.938	Cavia_aperea
ENSMUSG00000044475	Ascc1	90	87.500	ENSCPOG00000001670	ASCC1	96	87.500	Cavia_porcellus
ENSMUSG00000044475	Ascc1	100	87.115	ENSCCAG00000029607	ASCC1	100	87.115	Cebus_capucinus
ENSMUSG00000044475	Ascc1	100	78.711	ENSCATG00000013018	ASCC1	100	78.711	Cercocebus_atys
ENSMUSG00000044475	Ascc1	100	87.395	ENSCLAG00000012962	ASCC1	100	87.395	Chinchilla_lanigera
ENSMUSG00000044475	Ascc1	100	86.555	ENSCSAG00000008531	ASCC1	94	86.555	Chlorocebus_sabaeus
ENSMUSG00000044475	Ascc1	65	87.805	ENSCHOG00000005884	ASCC1	67	87.805	Choloepus_hoffmanni
ENSMUSG00000044475	Ascc1	100	62.921	ENSCPBG00000025878	ASCC1	100	62.921	Chrysemys_picta_bellii
ENSMUSG00000044475	Ascc1	97	41.547	ENSCING00000000491	-	97	41.547	Ciona_intestinalis
ENSMUSG00000044475	Ascc1	98	40.669	ENSCSAVG00000011769	-	98	40.669	Ciona_savignyi
ENSMUSG00000044475	Ascc1	100	75.070	ENSCANG00000032893	ASCC1	100	75.070	Colobus_angolensis_palliatus
ENSMUSG00000044475	Ascc1	100	90.169	ENSCGRG00001016548	Ascc1	100	90.169	Cricetulus_griseus_chok1gshd
ENSMUSG00000044475	Ascc1	100	90.169	ENSCGRG00000009484	Ascc1	100	90.169	Cricetulus_griseus_crigri
ENSMUSG00000044475	Ascc1	100	54.039	ENSCSEG00000017011	ascc1	100	54.039	Cynoglossus_semilaevis
ENSMUSG00000044475	Ascc1	89	51.713	ENSCVAG00000004935	ascc1	98	51.713	Cyprinodon_variegatus
ENSMUSG00000044475	Ascc1	71	57.480	ENSDARG00000077760	ascc1	100	57.480	Danio_rerio
ENSMUSG00000044475	Ascc1	83	80.135	ENSDNOG00000006561	ASCC1	95	80.135	Dasypus_novemcinctus
ENSMUSG00000044475	Ascc1	100	89.607	ENSDORG00000007065	Ascc1	100	89.607	Dipodomys_ordii
ENSMUSG00000044475	Ascc1	91	31.118	FBgn0033475	CG12129	85	31.118	Drosophila_melanogaster
ENSMUSG00000044475	Ascc1	89	75.714	ENSETEG00000000692	ASCC1	100	75.714	Echinops_telfairi
ENSMUSG00000044475	Ascc1	98	43.466	ENSEBUG00000012423	ASCC1	97	43.466	Eptatretus_burgeri
ENSMUSG00000044475	Ascc1	100	84.594	ENSEASG00005016551	ASCC1	100	84.594	Equus_asinus_asinus
ENSMUSG00000044475	Ascc1	100	84.314	ENSECAG00000017211	ASCC1	100	84.314	Equus_caballus
ENSMUSG00000044475	Ascc1	54	92.857	ENSEEUG00000014874	-	55	92.857	Erinaceus_europaeus
ENSMUSG00000044475	Ascc1	100	54.144	ENSELUG00000013564	ascc1	100	54.144	Esox_lucius
ENSMUSG00000044475	Ascc1	100	85.714	ENSFCAG00000026720	ASCC1	100	85.714	Felis_catus
ENSMUSG00000044475	Ascc1	100	63.202	ENSFALG00000012676	ASCC1	100	63.202	Ficedula_albicollis
ENSMUSG00000044475	Ascc1	100	88.235	ENSFDAG00000020297	ASCC1	100	88.235	Fukomys_damarensis
ENSMUSG00000044475	Ascc1	100	52.646	ENSFHEG00000012251	ascc1	100	53.186	Fundulus_heteroclitus
ENSMUSG00000044475	Ascc1	100	52.247	ENSGMOG00000000360	ascc1	100	52.528	Gadus_morhua
ENSMUSG00000044475	Ascc1	99	62.429	ENSGALG00000026019	ASCC1	99	62.429	Gallus_gallus
ENSMUSG00000044475	Ascc1	100	52.222	ENSGAFG00000004788	ascc1	100	52.222	Gambusia_affinis
ENSMUSG00000044475	Ascc1	100	51.923	ENSGACG00000002371	ascc1	100	51.923	Gasterosteus_aculeatus
ENSMUSG00000044475	Ascc1	91	62.539	ENSGAGG00000009896	ASCC1	99	62.539	Gopherus_agassizii
ENSMUSG00000044475	Ascc1	100	86.555	ENSGGOG00000007559	ASCC1	100	86.555	Gorilla_gorilla
ENSMUSG00000044475	Ascc1	100	53.760	ENSHBUG00000018521	ascc1	100	53.760	Haplochromis_burtoni
ENSMUSG00000044475	Ascc1	100	87.675	ENSHGLG00000012359	ASCC1	100	87.675	Heterocephalus_glaber_female
ENSMUSG00000044475	Ascc1	100	87.675	ENSHGLG00100012456	ASCC1	100	87.675	Heterocephalus_glaber_male
ENSMUSG00000044475	Ascc1	99	53.631	ENSHCOG00000016151	ascc1	99	53.631	Hippocampus_comes
ENSMUSG00000044475	Ascc1	99	54.749	ENSIPUG00000009943	ascc1	99	54.749	Ictalurus_punctatus
ENSMUSG00000044475	Ascc1	100	88.796	ENSSTOG00000000689	ASCC1	100	88.796	Ictidomys_tridecemlineatus
ENSMUSG00000044475	Ascc1	100	89.607	ENSJJAG00000009829	Ascc1	100	89.607	Jaculus_jaculus
ENSMUSG00000044475	Ascc1	100	53.482	ENSKMAG00000014780	ascc1	100	53.482	Kryptolebias_marmoratus
ENSMUSG00000044475	Ascc1	100	52.778	ENSLBEG00000016879	ascc1	100	53.186	Labrus_bergylta
ENSMUSG00000044475	Ascc1	100	57.703	ENSLACG00000017431	ASCC1	100	57.703	Latimeria_chalumnae
ENSMUSG00000044475	Ascc1	100	57.660	ENSLOCG00000005266	ascc1	100	57.660	Lepisosteus_oculatus
ENSMUSG00000044475	Ascc1	100	83.193	ENSLAFG00000015184	ASCC1	100	83.193	Loxodonta_africana
ENSMUSG00000044475	Ascc1	100	86.555	ENSMFAG00000042558	ASCC1	100	86.555	Macaca_fascicularis
ENSMUSG00000044475	Ascc1	89	86.520	ENSMMUG00000009479	ASCC1	99	88.235	Macaca_mulatta
ENSMUSG00000044475	Ascc1	100	85.994	ENSMNEG00000036564	ASCC1	100	85.994	Macaca_nemestrina
ENSMUSG00000044475	Ascc1	100	86.555	ENSMLEG00000027895	ASCC1	100	86.555	Mandrillus_leucophaeus
ENSMUSG00000044475	Ascc1	100	52.632	ENSMAMG00000019041	ascc1	100	52.632	Mastacembelus_armatus
ENSMUSG00000044475	Ascc1	100	53.203	ENSMZEG00005001082	ascc1	100	53.203	Maylandia_zebra
ENSMUSG00000044475	Ascc1	99	61.299	ENSMGAG00000005410	ASCC1	94	61.299	Meleagris_gallopavo
ENSMUSG00000044475	Ascc1	54	88.535	ENSMAUG00000009049	-	100	88.535	Mesocricetus_auratus
ENSMUSG00000044475	Ascc1	100	85.714	ENSMICG00000004222	ASCC1	100	85.714	Microcebus_murinus
ENSMUSG00000044475	Ascc1	100	91.573	ENSMOCG00000007733	Ascc1	100	91.573	Microtus_ochrogaster
ENSMUSG00000044475	Ascc1	100	51.821	ENSMMOG00000013797	ascc1	100	51.821	Mola_mola
ENSMUSG00000044475	Ascc1	100	50.693	ENSMALG00000001855	ascc1	100	51.247	Monopterus_albus
ENSMUSG00000044475	Ascc1	100	99.438	MGP_CAROLIEiJ_G0015351	Ascc1	100	99.438	Mus_caroli
ENSMUSG00000044475	Ascc1	100	97.191	MGP_PahariEiJ_G0030767	Ascc1	100	97.191	Mus_pahari
ENSMUSG00000044475	Ascc1	100	85.154	ENSMPUG00000004088	ASCC1	92	85.154	Mustela_putorius_furo
ENSMUSG00000044475	Ascc1	100	80.780	ENSMLUG00000005491	ASCC1	100	80.780	Myotis_lucifugus
ENSMUSG00000044475	Ascc1	100	90.169	ENSNGAG00000022999	Ascc1	100	90.169	Nannospalax_galili
ENSMUSG00000044475	Ascc1	100	53.371	ENSNBRG00000013947	ascc1	100	53.371	Neolamprologus_brichardi
ENSMUSG00000044475	Ascc1	100	86.555	ENSNLEG00000016392	ASCC1	100	86.555	Nomascus_leucogenys
ENSMUSG00000044475	Ascc1	70	39.919	ENSMEUG00000003812	-	100	39.919	Notamacropus_eugenii
ENSMUSG00000044475	Ascc1	89	63.714	ENSOPRG00000004965	ASCC1	100	63.714	Ochotona_princeps
ENSMUSG00000044475	Ascc1	100	75.630	ENSODEG00000013709	ASCC1	100	75.630	Octodon_degus
ENSMUSG00000044475	Ascc1	100	53.482	ENSONIG00000016090	ascc1	100	53.740	Oreochromis_niloticus
ENSMUSG00000044475	Ascc1	100	63.866	ENSOANG00000011748	ASCC1	100	63.866	Ornithorhynchus_anatinus
ENSMUSG00000044475	Ascc1	100	85.434	ENSOCUG00000016753	ASCC1	100	85.434	Oryctolagus_cuniculus
ENSMUSG00000044475	Ascc1	100	52.368	ENSORLG00000009163	ascc1	99	52.368	Oryzias_latipes
ENSMUSG00000044475	Ascc1	100	52.089	ENSORLG00020006942	ascc1	99	52.089	Oryzias_latipes_hni
ENSMUSG00000044475	Ascc1	100	52.089	ENSORLG00015006164	ascc1	99	52.089	Oryzias_latipes_hsok
ENSMUSG00000044475	Ascc1	100	53.463	ENSOMEG00000011960	ascc1	99	53.463	Oryzias_melastigma
ENSMUSG00000044475	Ascc1	100	86.275	ENSOGAG00000008212	ASCC1	94	86.275	Otolemur_garnettii
ENSMUSG00000044475	Ascc1	100	84.594	ENSOARG00000007094	ASCC1	99	84.594	Ovis_aries
ENSMUSG00000044475	Ascc1	100	86.555	ENSPPAG00000039805	ASCC1	100	86.555	Pan_paniscus
ENSMUSG00000044475	Ascc1	100	85.434	ENSPPRG00000010572	ASCC1	100	85.434	Panthera_pardus
ENSMUSG00000044475	Ascc1	100	85.154	ENSPTIG00000015725	ASCC1	100	85.154	Panthera_tigris_altaica
ENSMUSG00000044475	Ascc1	100	86.555	ENSPTRG00000002609	ASCC1	100	86.555	Pan_troglodytes
ENSMUSG00000044475	Ascc1	100	86.555	ENSPANG00000022316	ASCC1	100	86.555	Papio_anubis
ENSMUSG00000044475	Ascc1	100	55.153	ENSPKIG00000007571	ascc1	100	55.153	Paramormyrops_kingsleyae
ENSMUSG00000044475	Ascc1	70	64.516	ENSPSIG00000017791	ASCC1	97	64.516	Pelodiscus_sinensis
ENSMUSG00000044475	Ascc1	59	51.887	ENSPMGG00000003988	ascc1	93	52.427	Periophthalmus_magnuspinnatus
ENSMUSG00000044475	Ascc1	100	90.169	ENSPEMG00000002244	Ascc1	100	90.169	Peromyscus_maniculatus_bairdii
ENSMUSG00000044475	Ascc1	100	52.925	ENSPFOG00000023421	ascc1	100	52.925	Poecilia_formosa
ENSMUSG00000044475	Ascc1	100	53.203	ENSPLAG00000001021	ascc1	100	53.203	Poecilia_latipinna
ENSMUSG00000044475	Ascc1	100	52.235	ENSPMEG00000001736	ascc1	100	52.235	Poecilia_mexicana
ENSMUSG00000044475	Ascc1	100	53.501	ENSPREG00000001944	ascc1	100	53.501	Poecilia_reticulata
ENSMUSG00000044475	Ascc1	100	86.835	ENSPPYG00000002356	-	100	86.835	Pongo_abelii
ENSMUSG00000044475	Ascc1	79	86.694	ENSPCAG00000012317	ASCC1	81	86.694	Procavia_capensis
ENSMUSG00000044475	Ascc1	100	86.835	ENSPCOG00000017110	ASCC1	100	86.835	Propithecus_coquereli
ENSMUSG00000044475	Ascc1	92	75.562	ENSPVAG00000001554	ASCC1	99	75.562	Pteropus_vampyrus
ENSMUSG00000044475	Ascc1	100	53.203	ENSPNYG00000021413	ascc1	100	53.203	Pundamilia_nyererei
ENSMUSG00000044475	Ascc1	82	57.823	ENSPNAG00000008666	ascc1	90	58.020	Pygocentrus_nattereri
ENSMUSG00000044475	Ascc1	100	95.506	ENSRNOG00000056647	Ascc1	100	95.506	Rattus_norvegicus
ENSMUSG00000044475	Ascc1	100	85.994	ENSRBIG00000033507	ASCC1	100	85.994	Rhinopithecus_bieti
ENSMUSG00000044475	Ascc1	100	85.994	ENSRROG00000005189	ASCC1	100	85.994	Rhinopithecus_roxellana
ENSMUSG00000044475	Ascc1	100	80.112	ENSSBOG00000022342	ASCC1	100	80.112	Saimiri_boliviensis_boliviensis
ENSMUSG00000044475	Ascc1	100	66.947	ENSSHAG00000006413	ASCC1	100	66.947	Sarcophilus_harrisii
ENSMUSG00000044475	Ascc1	100	54.190	ENSSFOG00015013939	ascc1	100	54.190	Scleropages_formosus
ENSMUSG00000044475	Ascc1	100	52.646	ENSSMAG00000002213	ascc1	100	52.646	Scophthalmus_maximus
ENSMUSG00000044475	Ascc1	100	52.368	ENSSDUG00000019444	ascc1	100	52.909	Seriola_dumerili
ENSMUSG00000044475	Ascc1	100	51.811	ENSSLDG00000024224	ascc1	100	52.355	Seriola_lalandi_dorsalis
ENSMUSG00000044475	Ascc1	89	71.060	ENSSARG00000001560	ASCC1	100	71.060	Sorex_araneus
ENSMUSG00000044475	Ascc1	100	63.687	ENSSPUG00000010417	ASCC1	100	63.687	Sphenodon_punctatus
ENSMUSG00000044475	Ascc1	100	51.676	ENSSPAG00000015588	ascc1	100	51.676	Stegastes_partitus
ENSMUSG00000044475	Ascc1	100	85.714	ENSSSCG00000023130	ASCC1	100	85.714	Sus_scrofa
ENSMUSG00000044475	Ascc1	100	53.933	ENSTRUG00000012576	ascc1	100	53.933	Takifugu_rubripes
ENSMUSG00000044475	Ascc1	100	52.717	ENSTNIG00000019392	ascc1	100	53.533	Tetraodon_nigroviridis
ENSMUSG00000044475	Ascc1	79	76.923	ENSTBEG00000005601	ASCC1	100	76.923	Tupaia_belangeri
ENSMUSG00000044475	Ascc1	92	74.722	ENSTTRG00000009744	ASCC1	99	74.722	Tursiops_truncatus
ENSMUSG00000044475	Ascc1	100	85.994	ENSUAMG00000009172	ASCC1	100	85.994	Ursus_americanus
ENSMUSG00000044475	Ascc1	89	85.893	ENSUMAG00000008959	ASCC1	89	85.893	Ursus_maritimus
ENSMUSG00000044475	Ascc1	82	75.542	ENSVPAG00000002811	ASCC1	100	75.542	Vicugna_pacos
ENSMUSG00000044475	Ascc1	100	85.714	ENSVVUG00000022616	ASCC1	100	85.714	Vulpes_vulpes
ENSMUSG00000044475	Ascc1	100	60.504	ENSXETG00000006149	ascc1	100	60.504	Xenopus_tropicalis
ENSMUSG00000044475	Ascc1	100	52.646	ENSXCOG00000006169	ascc1	100	52.646	Xiphophorus_couchianus
ENSMUSG00000044475	Ascc1	100	51.955	ENSXMAG00000014996	ascc1	100	51.955	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003713	transcription coactivator activity	-	ISO	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005667	transcription factor complex	-	ISO	Component
GO:0006281	DNA repair	-	IEA	Process
GO:0006355	regulation of transcription, DNA-templated	-	ISO	Process
GO:0006974	cellular response to DNA damage stimulus	-	IEA	Process
GO:0031594	neuromuscular junction	-	ISO	Component