EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000045817 (Gene tree)
Gene ID: 12193
Gene Symbol: Zfp36l2
Alias: Brf2|ERF2|Tis11d
Full Name: zinc finger protein 36%2C C3H type-like 2
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 4017 bases
Position: chr17:84183931-84187947
Accession: 107945
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000050820	zf-CCCH	PF00642.24	5.2e-21	1	2
ENSMUSP00000050820	zf-CCCH	PF00642.24	5.2e-21	2	2

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000060366	-	3530	-	ENSMUSP00000050820	484 (aa)	-	P23949

Gene Model

Click here to download ENSMUSG00000045817's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04218	Cellular senescence	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000045817's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000045817	Zfp36l2	100	42.626	ENSMUSG00000021127	Zfp36l1	80	65.079

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000045817	Zfp36l2	100	86.145	ENSG00000152518	ZFP36L2	100	82.932	Homo_sapiens
ENSMUSG00000045817	Zfp36l2	100	50.693	ENSAPOG00000004647	zfp36l2	61	55.518	Acanthochromis_polyacanthus
ENSMUSG00000045817	Zfp36l2	85	85.920	ENSAMEG00000005597	ZFP36L2	68	85.836	Ailuropoda_melanoleuca
ENSMUSG00000045817	Zfp36l2	100	51.186	ENSACIG00000014285	zfp36l2	63	55.184	Amphilophus_citrinellus
ENSMUSG00000045817	Zfp36l2	100	50.992	ENSAOCG00000011193	zfp36l2	61	55.705	Amphiprion_ocellaris
ENSMUSG00000045817	Zfp36l2	100	50.794	ENSAPEG00000006879	zfp36l2	61	55.705	Amphiprion_percula
ENSMUSG00000045817	Zfp36l2	100	50.484	ENSATEG00000009119	zfp36l2	62	53.698	Anabas_testudineus
ENSMUSG00000045817	Zfp36l2	100	85.915	ENSANAG00000025228	ZFP36L2	100	83.501	Aotus_nancymaae
ENSMUSG00000045817	Zfp36l2	100	50.888	ENSACLG00000015842	zfp36l2	61	54.333	Astatotilapia_calliptera
ENSMUSG00000045817	Zfp36l2	84	54.688	ENSAMXG00000043777	ZFP36L2	90	54.400	Astyanax_mexicanus
ENSMUSG00000045817	Zfp36l2	70	75.410	ENSAMXG00000040114	zfp36l2	79	68.852	Astyanax_mexicanus
ENSMUSG00000045817	Zfp36l2	100	82.724	ENSBTAG00000003553	ZFP36L2	100	81.911	Bos_taurus
ENSMUSG00000045817	Zfp36l2	100	86.974	ENSCJAG00000014571	ZFP36L2	100	82.365	Callithrix_jacchus
ENSMUSG00000045817	Zfp36l2	100	82.731	ENSCAFG00000031079	ZFP36L2	100	82.258	Canis_familiaris
ENSMUSG00000045817	Zfp36l2	100	82.400	ENSCAFG00020025413	ZFP36L2	100	81.928	Canis_lupus_dingo
ENSMUSG00000045817	Zfp36l2	100	87.117	ENSCHIG00000025020	ZFP36L2	100	83.640	Capra_hircus
ENSMUSG00000045817	Zfp36l2	79	75.515	ENSCPOG00000022038	ZFP36L2	91	72.868	Cavia_porcellus
ENSMUSG00000045817	Zfp36l2	100	85.915	ENSCCAG00000027388	ZFP36L2	100	83.501	Cebus_capucinus
ENSMUSG00000045817	Zfp36l2	100	82.961	ENSCATG00000009833	ZFP36L2	100	83.976	Cercocebus_atys
ENSMUSG00000045817	Zfp36l2	100	81.250	ENSCSAG00000012709	ZFP36L2	100	83.065	Chlorocebus_sabaeus
ENSMUSG00000045817	Zfp36l2	100	59.316	ENSCPBG00000005249	ZFP36L2	66	62.346	Chrysemys_picta_bellii
ENSMUSG00000045817	Zfp36l2	62	97.101	ENSCANG00000039077	ZFP36L2	96	96.970	Colobus_angolensis_palliatus
ENSMUSG00000045817	Zfp36l2	95	56.944	ENSCGRG00001005650	-	71	39.506	Cricetulus_griseus_chok1gshd
ENSMUSG00000045817	Zfp36l2	100	90.244	ENSCGRG00001023281	Zfp36l2	100	87.805	Cricetulus_griseus_chok1gshd
ENSMUSG00000045817	Zfp36l2	100	46.552	ENSCSEG00000000741	zfp36l2	63	50.473	Cynoglossus_semilaevis
ENSMUSG00000045817	Zfp36l2	100	43.117	ENSDARG00000021806	zfp36l2	81	74.576	Danio_rerio
ENSMUSG00000045817	Zfp36l2	57	98.485	ENSDNOG00000043725	ZFP36L2	77	85.268	Dasypus_novemcinctus
ENSMUSG00000045817	Zfp36l2	60	98.611	ENSDORG00000027040	Zfp36l2	98	98.485	Dipodomys_ordii
ENSMUSG00000045817	Zfp36l2	100	85.288	ENSEASG00005005027	ZFP36L2	70	83.300	Equus_asinus_asinus
ENSMUSG00000045817	Zfp36l2	97	84.318	ENSECAG00000017795	ZFP36L2	95	82.281	Equus_caballus
ENSMUSG00000045817	Zfp36l2	100	50.101	ENSELUG00000000600	zfp36l2	61	56.314	Esox_lucius
ENSMUSG00000045817	Zfp36l2	100	84.190	ENSFCAG00000043567	ZFP36L2	100	80.040	Felis_catus
ENSMUSG00000045817	Zfp36l2	100	50.800	ENSFHEG00000020530	zfp36l2	62	56.655	Fundulus_heteroclitus
ENSMUSG00000045817	Zfp36l2	100	79.276	ENSGGOG00000001402	ZFP36L2	100	78.471	Gorilla_gorilla
ENSMUSG00000045817	Zfp36l2	100	50.493	ENSHBUG00000007929	zfp36l2	61	54.153	Haplochromis_burtoni
ENSMUSG00000045817	Zfp36l2	100	78.819	ENSHGLG00000005547	ZFP36L2	100	76.531	Heterocephalus_glaber_female
ENSMUSG00000045817	Zfp36l2	100	44.785	ENSHCOG00000006757	zfp36l2	94	46.575	Hippocampus_comes
ENSMUSG00000045817	Zfp36l2	68	66.216	ENSIPUG00000008010	zfp36l2	64	47.203	Ictalurus_punctatus
ENSMUSG00000045817	Zfp36l2	100	87.449	ENSSTOG00000024603	ZFP36L2	100	83.806	Ictidomys_tridecemlineatus
ENSMUSG00000045817	Zfp36l2	77	81.250	ENSJJAG00000024221	Zfp36l2	100	82.759	Jaculus_jaculus
ENSMUSG00000045817	Zfp36l2	62	51.007	ENSKMAG00000011495	zfp36l2	86	59.091	Kryptolebias_marmoratus
ENSMUSG00000045817	Zfp36l2	100	80.040	ENSLAFG00000004265	ZFP36L2	100	81.673	Loxodonta_africana
ENSMUSG00000045817	Zfp36l2	100	81.250	ENSMFAG00000001243	ZFP36L2	100	82.863	Macaca_fascicularis
ENSMUSG00000045817	Zfp36l2	100	80.847	ENSMMUG00000042653	ZFP36L2	100	82.661	Macaca_mulatta
ENSMUSG00000045817	Zfp36l2	100	81.087	ENSMNEG00000034994	ZFP36L2	100	82.495	Macaca_nemestrina
ENSMUSG00000045817	Zfp36l2	100	52.079	ENSMAMG00000010793	zfp36l2	61	56.522	Mastacembelus_armatus
ENSMUSG00000045817	Zfp36l2	100	50.888	ENSMZEG00005018129	zfp36l2	61	54.333	Maylandia_zebra
ENSMUSG00000045817	Zfp36l2	82	44.363	ENSMAUG00000002048	-	72	41.687	Mesocricetus_auratus
ENSMUSG00000045817	Zfp36l2	100	76.327	ENSMICG00000004731	-	100	74.385	Microcebus_murinus
ENSMUSG00000045817	Zfp36l2	100	85.341	ENSMICG00000034373	ZFP36L2	100	81.526	Microcebus_murinus
ENSMUSG00000045817	Zfp36l2	100	92.041	ENSMOCG00000011066	Zfp36l2	100	89.388	Microtus_ochrogaster
ENSMUSG00000045817	Zfp36l2	100	63.327	ENSMODG00000000407	ZFP36L2	98	65.936	Monodelphis_domestica
ENSMUSG00000045817	Zfp36l2	56	47.857	ENSMALG00000005933	zfp36l2	78	41.854	Monopterus_albus
ENSMUSG00000045817	Zfp36l2	100	98.969	MGP_CAROLIEiJ_G0021921	Zfp36l2	100	98.969	Mus_caroli
ENSMUSG00000045817	Zfp36l2	100	98.148	MGP_PahariEiJ_G0020911	Zfp36l2	100	98.148	Mus_pahari
ENSMUSG00000045817	Zfp36l2	100	98.763	MGP_SPRETEiJ_G0022837	Zfp36l2	100	98.763	Mus_spretus
ENSMUSG00000045817	Zfp36l2	99	85.600	ENSMPUG00000011587	ZFP36L2	99	80.600	Mustela_putorius_furo
ENSMUSG00000045817	Zfp36l2	53	77.220	ENSMLUG00000015588	-	73	76.062	Myotis_lucifugus
ENSMUSG00000045817	Zfp36l2	100	87.143	ENSNGAG00000001096	Zfp36l2	100	89.388	Nannospalax_galili
ENSMUSG00000045817	Zfp36l2	100	51.677	ENSNBRG00000019818	zfp36l2	61	55.667	Neolamprologus_brichardi
ENSMUSG00000045817	Zfp36l2	100	83.768	ENSNLEG00000016712	ZFP36L2	100	81.200	Nomascus_leucogenys
ENSMUSG00000045817	Zfp36l2	55	77.899	ENSMEUG00000010649	ZFP36L2	100	69.495	Notamacropus_eugenii
ENSMUSG00000045817	Zfp36l2	100	50.888	ENSONIG00000002997	zfp36l2	61	54.817	Oreochromis_niloticus
ENSMUSG00000045817	Zfp36l2	57	57.597	ENSOANG00000002848	-	80	60.777	Ornithorhynchus_anatinus
ENSMUSG00000045817	Zfp36l2	59	88.055	ENSOCUG00000029169	ZFP36L2	79	86.007	Oryctolagus_cuniculus
ENSMUSG00000045817	Zfp36l2	100	50.392	ENSORLG00000022580	zfp36l2	62	55.556	Oryzias_latipes
ENSMUSG00000045817	Zfp36l2	100	51.670	ENSORLG00020002536	zfp36l2	61	55.960	Oryzias_latipes_hni
ENSMUSG00000045817	Zfp36l2	100	51.491	ENSORLG00015000268	zfp36l2	62	55.556	Oryzias_latipes_hsok
ENSMUSG00000045817	Zfp36l2	100	83.968	ENSOGAG00000028804	ZFP36L2	84	82.766	Otolemur_garnettii
ENSMUSG00000045817	Zfp36l2	70	98.413	ENSPPAG00000031644	-	74	96.970	Pan_paniscus
ENSMUSG00000045817	Zfp36l2	100	82.806	ENSPPRG00000012511	ZFP36L2	100	79.447	Panthera_pardus
ENSMUSG00000045817	Zfp36l2	100	86.667	ENSPTRG00000051255	ZFP36L2	100	83.434	Pan_troglodytes
ENSMUSG00000045817	Zfp36l2	100	81.250	ENSPANG00000018603	ZFP36L2	100	83.065	Papio_anubis
ENSMUSG00000045817	Zfp36l2	66	60.377	ENSPKIG00000009699	-	63	41.791	Paramormyrops_kingsleyae
ENSMUSG00000045817	Zfp36l2	100	51.085	ENSPKIG00000022742	zfp36l2	63	57.525	Paramormyrops_kingsleyae
ENSMUSG00000045817	Zfp36l2	100	51.423	ENSPMGG00000018810	zfp36l2	60	56.747	Periophthalmus_magnuspinnatus
ENSMUSG00000045817	Zfp36l2	100	85.481	ENSPEMG00000018068	Zfp36l2	100	85.481	Peromyscus_maniculatus_bairdii
ENSMUSG00000045817	Zfp36l2	58	42.715	ENSPEMG00000017331	-	77	42.667	Peromyscus_maniculatus_bairdii
ENSMUSG00000045817	Zfp36l2	100	50.204	ENSPLAG00000015739	zfp36l2	60	55.594	Poecilia_latipinna
ENSMUSG00000045817	Zfp36l2	100	50.607	ENSPMEG00000008897	zfp36l2	60	56.597	Poecilia_mexicana
ENSMUSG00000045817	Zfp36l2	100	51.008	ENSPMEG00000013175	-	60	56.597	Poecilia_mexicana
ENSMUSG00000045817	Zfp36l2	100	51.012	ENSPREG00000010467	zfp36l2	60	56.014	Poecilia_reticulata
ENSMUSG00000045817	Zfp36l2	69	85.673	ENSPPYG00000012458	-	99	80.588	Pongo_abelii
ENSMUSG00000045817	Zfp36l2	76	86.909	ENSPCAG00000010765	ZFP36L2	75	85.091	Procavia_capensis
ENSMUSG00000045817	Zfp36l2	100	84.739	ENSPCOG00000015409	ZFP36L2	100	81.325	Propithecus_coquereli
ENSMUSG00000045817	Zfp36l2	100	49.293	ENSPNAG00000013174	ZFP36L2	93	57.258	Pygocentrus_nattereri
ENSMUSG00000045817	Zfp36l2	100	40.164	ENSPNAG00000009692	zfp36l2	80	70.492	Pygocentrus_nattereri
ENSMUSG00000045817	Zfp36l2	100	92.638	ENSRNOG00000050108	LOC100911319	100	89.366	Rattus_norvegicus
ENSMUSG00000045817	Zfp36l2	100	92.434	ENSRNOG00000005067	Zfp36l2	100	89.162	Rattus_norvegicus
ENSMUSG00000045817	Zfp36l2	100	80.119	ENSRBIG00000026428	ZFP36L2	100	81.511	Rhinopithecus_bieti
ENSMUSG00000045817	Zfp36l2	100	80.439	ENSRROG00000042023	ZFP36L2	100	82.186	Rhinopithecus_roxellana
ENSMUSG00000045817	Zfp36l2	59	91.930	ENSSBOG00000020271	ZFP36L2	81	90.877	Saimiri_boliviensis_boliviensis
ENSMUSG00000045817	Zfp36l2	70	62.667	ENSSFOG00015008894	zfp36l2	93	44.521	Scleropages_formosus
ENSMUSG00000045817	Zfp36l2	77	53.924	ENSSMAG00000015565	zfp36l2	54	64.583	Scophthalmus_maximus
ENSMUSG00000045817	Zfp36l2	100	50.495	ENSSDUG00000000788	zfp36l2	61	55.705	Seriola_dumerili
ENSMUSG00000045817	Zfp36l2	100	50.198	ENSSLDG00000001126	zfp36l2	61	54.849	Seriola_lalandi_dorsalis
ENSMUSG00000045817	Zfp36l2	100	55.373	ENSSPUG00000009625	ZFP36L2	100	54.015	Sphenodon_punctatus
ENSMUSG00000045817	Zfp36l2	100	51.089	ENSSPAG00000009096	zfp36l2	61	55.853	Stegastes_partitus
ENSMUSG00000045817	Zfp36l2	100	86.318	ENSSSCG00000038549	ZFP36L2	100	83.501	Sus_scrofa
ENSMUSG00000045817	Zfp36l2	100	50.296	ENSTRUG00000019626	zfp36l2	61	54.636	Takifugu_rubripes
ENSMUSG00000045817	Zfp36l2	61	85.666	ENSTBEG00000012370	ZFP36L2	89	84.912	Tupaia_belangeri
ENSMUSG00000045817	Zfp36l2	100	86.345	ENSTTRG00000006356	ZFP36L2	100	83.333	Tursiops_truncatus
ENSMUSG00000045817	Zfp36l2	100	85.060	ENSUAMG00000024227	ZFP36L2	100	81.873	Ursus_americanus
ENSMUSG00000045817	Zfp36l2	74	85.205	ENSVVUG00000000298	ZFP36L2	60	82.418	Vulpes_vulpes
ENSMUSG00000045817	Zfp36l2	100	56.495	ENSXETG00000009274	zfp36l2	91	64.085	Xenopus_tropicalis
ENSMUSG00000045817	Zfp36l2	95	50.000	ENSXCOG00000006597	zfp36l2	93	49.015	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000165	MAPK cascade	24733888.	IDA	Process
GO:0000288	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	15814898.	IDA	Process
GO:0003677	DNA binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0003730	mRNA 3'-UTR binding	21873635.	IBA	Function
GO:0005634	nucleus	11796723.22367205.24733888.	IDA	Component
GO:0005737	cytoplasm	11796723.22367205.24733888.	IDA	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0006402	mRNA catabolic process	22367205.	IDA	Process
GO:0007275	multicellular organism development	-	IEA	Process
GO:0009611	response to wounding	-	ISO	Process
GO:0017091	AU-rich element binding	-	ISO	Function
GO:0030097	hemopoiesis	19633199.23748442.	IMP	Process
GO:0033077	T cell differentiation in thymus	20622884.	IGI	Process
GO:0033077	T cell differentiation in thymus	20622884.	IMP	Process
GO:0035019	somatic stem cell population maintenance	23748442.	IMP	Process
GO:0035925	mRNA 3'-UTR AU-rich region binding	20622884.22367205.22701344.23748442.	IDA	Function
GO:0035925	mRNA 3'-UTR AU-rich region binding	-	ISO	Function
GO:0043488	regulation of mRNA stability	15467755.20622884.22701344.	IDA	Process
GO:0043488	regulation of mRNA stability	-	ISO	Process
GO:0044344	cellular response to fibroblast growth factor stimulus	24733888.	IDA	Process
GO:0044344	cellular response to fibroblast growth factor stimulus	-	ISO	Process
GO:0045577	regulation of B cell differentiation	27102483.	IMP	Process
GO:0045599	negative regulation of fat cell differentiation	22701344.	IDA	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0048103	somatic stem cell division	23748442.	IMP	Process
GO:0060216	definitive hemopoiesis	19633199.	IMP	Process
GO:0061158	3'-UTR-mediated mRNA destabilization	21873635.	IBA	Process
GO:0061158	3'-UTR-mediated mRNA destabilization	20622884.22701344.	IDA	Process
GO:0061158	3'-UTR-mediated mRNA destabilization	-	ISO	Process
GO:0070371	ERK1 and ERK2 cascade	-	ISO	Process
GO:0071356	cellular response to tumor necrosis factor	-	ISO	Process
GO:0071364	cellular response to epidermal growth factor stimulus	-	ISO	Process
GO:0071385	cellular response to glucocorticoid stimulus	-	ISO	Process
GO:0071560	cellular response to transforming growth factor beta stimulus	-	ISO	Process
GO:0097011	cellular response to granulocyte macrophage colony-stimulating factor stimulus	-	ISO	Process
GO:1900153	positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	22367205.	IDA	Process
GO:1901991	negative regulation of mitotic cell cycle phase transition	27102483.	IMP	Process
GO:2000737	negative regulation of stem cell differentiation	23748442.	IMP	Process