EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000045996 (Gene tree)
Gene ID: 17749
Gene Symbol: Polr2k
Alias: ABC10-alpha|MafY|Mt1a|RPABC4|RPB10alpha|RPB12|RPB7.0
Full Name: polymerase (RNA) II (DNA directed) polypeptide K
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 3001 bases
Position: chr15:36174010-36177010
Accession: 102725
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000136975	DNA_RNApol_7kD	PF03604.13	6.8e-17	1	1
ENSMUSP00000051968	DNA_RNApol_7kD	PF03604.13	2.3e-16	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000057177	-	601	-	ENSMUSP00000051968	99 (aa)	-	Q8BFX0
ENSMUST00000180159	-	489	-	ENSMUSP00000136975	58 (aa)	-	Q63871

Gene Model

Click here to download ENSMUSG00000045996's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000045996's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000045996	Polr2k	100	98.276	ENSG00000147669	POLR2K	100	98.276	Homo_sapiens
ENSMUSG00000045996	Polr2k	100	98.276	ENSAMEG00000000452	POLR2K	100	98.276	Ailuropoda_melanoleuca
ENSMUSG00000045996	Polr2k	100	96.552	ENSAPEG00000010759	polr2k	100	96.552	Amphiprion_percula
ENSMUSG00000045996	Polr2k	100	96.552	ENSATEG00000013218	polr2k	100	96.552	Anabas_testudineus
ENSMUSG00000045996	Polr2k	100	89.655	ENSACAG00000020961	POLR2K	100	89.655	Anolis_carolinensis
ENSMUSG00000045996	Polr2k	98	91.228	ENSANAG00000030159	-	100	91.228	Aotus_nancymaae
ENSMUSG00000045996	Polr2k	100	98.276	ENSANAG00000031482	-	100	98.276	Aotus_nancymaae
ENSMUSG00000045996	Polr2k	100	70.000	ENSAMXG00000038868	-	100	70.000	Astyanax_mexicanus
ENSMUSG00000045996	Polr2k	74	90.698	ENSBTAG00000052277	-	90	67.188	Bos_taurus
ENSMUSG00000045996	Polr2k	100	98.276	ENSBTAG00000022539	POLR2K	100	98.276	Bos_taurus
ENSMUSG00000045996	Polr2k	100	98.276	ENSCJAG00000022168	-	100	98.276	Callithrix_jacchus
ENSMUSG00000045996	Polr2k	100	98.276	ENSCJAG00000041308	-	82	98.276	Callithrix_jacchus
ENSMUSG00000045996	Polr2k	100	94.828	ENSCAFG00000032117	POLR2K	100	94.828	Canis_familiaris
ENSMUSG00000045996	Polr2k	100	98.276	ENSCAFG00020000296	-	100	98.276	Canis_lupus_dingo
ENSMUSG00000045996	Polr2k	100	94.828	ENSCAFG00020023694	-	100	94.828	Canis_lupus_dingo
ENSMUSG00000045996	Polr2k	100	89.062	ENSCAFG00020011172	-	100	89.062	Canis_lupus_dingo
ENSMUSG00000045996	Polr2k	100	96.552	ENSCHIG00000007790	-	100	96.552	Capra_hircus
ENSMUSG00000045996	Polr2k	100	98.276	ENSCHIG00000012813	POLR2K	100	98.276	Capra_hircus
ENSMUSG00000045996	Polr2k	98	96.491	ENSTSYG00000032761	-	100	96.491	Carlito_syrichta
ENSMUSG00000045996	Polr2k	100	94.828	ENSTSYG00000035576	-	100	94.828	Carlito_syrichta
ENSMUSG00000045996	Polr2k	83	97.917	ENSCAPG00000017627	POLR2K	100	97.917	Cavia_aperea
ENSMUSG00000045996	Polr2k	100	96.552	ENSCPOG00000036717	POLR2K	100	96.552	Cavia_porcellus
ENSMUSG00000045996	Polr2k	98	94.737	ENSCCAG00000002072	-	100	94.737	Cebus_capucinus
ENSMUSG00000045996	Polr2k	100	98.276	ENSCCAG00000004867	-	100	98.276	Cebus_capucinus
ENSMUSG00000045996	Polr2k	100	98.276	ENSCCAG00000019633	-	100	98.276	Cebus_capucinus
ENSMUSG00000045996	Polr2k	100	98.276	ENSCATG00000007143	POLR2K	100	98.276	Cercocebus_atys
ENSMUSG00000045996	Polr2k	100	96.552	ENSCLAG00000010033	POLR2K	100	96.552	Chinchilla_lanigera
ENSMUSG00000045996	Polr2k	100	98.276	ENSCSAG00000012163	POLR2K	100	98.276	Chlorocebus_sabaeus
ENSMUSG00000045996	Polr2k	100	98.276	ENSCHOG00000003599	POLR2K	100	98.276	Choloepus_hoffmanni
ENSMUSG00000045996	Polr2k	100	87.931	ENSCHOG00000000784	-	100	87.931	Choloepus_hoffmanni
ENSMUSG00000045996	Polr2k	88	94.118	ENSCHOG00000008820	-	100	94.118	Choloepus_hoffmanni
ENSMUSG00000045996	Polr2k	100	98.276	ENSCANG00000041713	POLR2K	100	98.276	Colobus_angolensis_palliatus
ENSMUSG00000045996	Polr2k	100	100.000	ENSCGRG00000011617	Polr2k	100	100.000	Cricetulus_griseus_crigri
ENSMUSG00000045996	Polr2k	100	94.828	ENSCSEG00000017377	polr2k	100	94.828	Cynoglossus_semilaevis
ENSMUSG00000045996	Polr2k	100	96.552	ENSCVAG00000022985	-	100	96.552	Cyprinodon_variegatus
ENSMUSG00000045996	Polr2k	100	96.552	ENSCVAG00000005198	polr2k	100	96.552	Cyprinodon_variegatus
ENSMUSG00000045996	Polr2k	100	94.828	ENSDARG00000075616	polr2k	100	94.828	Danio_rerio
ENSMUSG00000045996	Polr2k	100	96.552	ENSDNOG00000030774	-	100	96.552	Dasypus_novemcinctus
ENSMUSG00000045996	Polr2k	100	94.828	ENSDNOG00000047079	-	100	94.828	Dasypus_novemcinctus
ENSMUSG00000045996	Polr2k	100	87.931	ENSDNOG00000038181	-	100	69.318	Dasypus_novemcinctus
ENSMUSG00000045996	Polr2k	100	98.276	ENSDNOG00000049353	-	100	98.276	Dasypus_novemcinctus
ENSMUSG00000045996	Polr2k	100	96.552	ENSDORG00000028386	Polr2k	100	96.552	Dipodomys_ordii
ENSMUSG00000045996	Polr2k	81	82.979	FBgn0262954	Rpb12	82	82.979	Drosophila_melanogaster
ENSMUSG00000045996	Polr2k	86	72.000	ENSEASG00005016441	-	91	53.333	Equus_asinus_asinus
ENSMUSG00000045996	Polr2k	100	98.276	ENSEASG00005002840	-	100	98.276	Equus_asinus_asinus
ENSMUSG00000045996	Polr2k	100	98.276	ENSECAG00000021345	POLR2K	100	98.276	Equus_caballus
ENSMUSG00000045996	Polr2k	98	82.456	ENSECAG00000029464	-	72	82.456	Equus_caballus
ENSMUSG00000045996	Polr2k	88	92.157	ENSEEUG00000015727	POLR2K	100	92.157	Erinaceus_europaeus
ENSMUSG00000045996	Polr2k	100	96.552	ENSFALG00000005795	POLR2K	100	96.552	Ficedula_albicollis
ENSMUSG00000045996	Polr2k	100	98.276	ENSFDAG00000000348	POLR2K	100	98.276	Fukomys_damarensis
ENSMUSG00000045996	Polr2k	88	86.275	ENSFDAG00000018794	-	100	86.275	Fukomys_damarensis
ENSMUSG00000045996	Polr2k	98	66.667	ENSFHEG00000019707	-	98	63.333	Fundulus_heteroclitus
ENSMUSG00000045996	Polr2k	100	96.552	ENSGALG00000036019	POLR2K	74	65.000	Gallus_gallus
ENSMUSG00000045996	Polr2k	100	96.552	ENSGAFG00000010349	polr2k	100	96.552	Gambusia_affinis
ENSMUSG00000045996	Polr2k	100	96.552	ENSGAGG00000009919	POLR2K	100	96.552	Gopherus_agassizii
ENSMUSG00000045996	Polr2k	100	98.276	ENSGGOG00000024539	POLR2K	100	98.276	Gorilla_gorilla
ENSMUSG00000045996	Polr2k	91	83.019	ENSGGOG00000015089	-	96	83.019	Gorilla_gorilla
ENSMUSG00000045996	Polr2k	100	94.828	ENSHBUG00000002269	polr2k	100	94.828	Haplochromis_burtoni
ENSMUSG00000045996	Polr2k	100	98.276	ENSHGLG00000004285	POLR2K	100	98.276	Heterocephalus_glaber_female
ENSMUSG00000045996	Polr2k	100	93.103	ENSHGLG00000021192	-	100	93.103	Heterocephalus_glaber_female
ENSMUSG00000045996	Polr2k	100	98.276	ENSHGLG00100005467	POLR2K	100	98.276	Heterocephalus_glaber_male
ENSMUSG00000045996	Polr2k	100	86.207	ENSHCOG00000016287	polr2k	100	86.207	Hippocampus_comes
ENSMUSG00000045996	Polr2k	100	98.276	ENSSTOG00000006123	-	100	98.276	Ictidomys_tridecemlineatus
ENSMUSG00000045996	Polr2k	81	95.745	ENSSTOG00000032566	-	96	95.745	Ictidomys_tridecemlineatus
ENSMUSG00000045996	Polr2k	97	83.929	ENSJJAG00000016100	-	88	83.929	Jaculus_jaculus
ENSMUSG00000045996	Polr2k	98	84.211	ENSJJAG00000012986	-	98	84.211	Jaculus_jaculus
ENSMUSG00000045996	Polr2k	100	96.552	ENSJJAG00000014209	-	100	96.552	Jaculus_jaculus
ENSMUSG00000045996	Polr2k	95	87.273	ENSJJAG00000000698	-	95	87.273	Jaculus_jaculus
ENSMUSG00000045996	Polr2k	100	96.552	ENSJJAG00000000271	-	100	96.552	Jaculus_jaculus
ENSMUSG00000045996	Polr2k	100	94.828	ENSKMAG00000016379	-	100	94.828	Kryptolebias_marmoratus
ENSMUSG00000045996	Polr2k	100	94.828	ENSKMAG00000007731	polr2k	100	94.828	Kryptolebias_marmoratus
ENSMUSG00000045996	Polr2k	100	93.103	ENSLBEG00000027114	polr2k	100	93.103	Labrus_bergylta
ENSMUSG00000045996	Polr2k	100	93.220	ENSLACG00000015753	POLR2K	100	93.220	Latimeria_chalumnae
ENSMUSG00000045996	Polr2k	100	94.828	ENSLOCG00000009730	polr2k	100	94.828	Lepisosteus_oculatus
ENSMUSG00000045996	Polr2k	98	94.737	ENSLAFG00000005254	-	100	94.737	Loxodonta_africana
ENSMUSG00000045996	Polr2k	100	98.276	ENSMFAG00000030863	-	100	98.276	Macaca_fascicularis
ENSMUSG00000045996	Polr2k	98	65.217	ENSMFAG00000039166	-	100	68.116	Macaca_fascicularis
ENSMUSG00000045996	Polr2k	100	98.276	ENSMMUG00000020714	-	100	98.276	Macaca_mulatta
ENSMUSG00000045996	Polr2k	98	85.965	ENSMMUG00000040264	-	100	85.965	Macaca_mulatta
ENSMUSG00000045996	Polr2k	100	98.276	ENSMNEG00000023503	-	100	98.276	Macaca_nemestrina
ENSMUSG00000045996	Polr2k	98	63.768	ENSMNEG00000033552	-	100	68.116	Macaca_nemestrina
ENSMUSG00000045996	Polr2k	100	98.276	ENSMLEG00000038200	POLR2K	100	98.276	Mandrillus_leucophaeus
ENSMUSG00000045996	Polr2k	93	83.333	ENSMLEG00000012572	-	79	83.333	Mandrillus_leucophaeus
ENSMUSG00000045996	Polr2k	100	94.828	ENSMAMG00000014290	polr2k	100	94.828	Mastacembelus_armatus
ENSMUSG00000045996	Polr2k	100	94.828	ENSMZEG00005003220	polr2k	100	94.828	Maylandia_zebra
ENSMUSG00000045996	Polr2k	100	98.276	ENSMAUG00000010288	Polr2k	100	98.276	Mesocricetus_auratus
ENSMUSG00000045996	Polr2k	100	98.276	ENSMICG00000044624	POLR2K	100	98.276	Microcebus_murinus
ENSMUSG00000045996	Polr2k	100	98.276	ENSMOCG00000009880	Polr2k	100	98.276	Microtus_ochrogaster
ENSMUSG00000045996	Polr2k	100	94.828	ENSMMOG00000017945	polr2k	100	94.828	Mola_mola
ENSMUSG00000045996	Polr2k	100	100.000	ENSMODG00000006312	POLR2K	100	100.000	Monodelphis_domestica
ENSMUSG00000045996	Polr2k	100	100.000	MGP_CAROLIEiJ_G0019735	Polr2k	100	100.000	Mus_caroli
ENSMUSG00000045996	Polr2k	100	100.000	MGP_PahariEiJ_G0019744	-	100	100.000	Mus_pahari
ENSMUSG00000045996	Polr2k	100	98.276	MGP_SPRETEiJ_G0020631	Polr2k	100	98.276	Mus_spretus
ENSMUSG00000045996	Polr2k	98	89.474	ENSMLUG00000029803	-	100	89.474	Myotis_lucifugus
ENSMUSG00000045996	Polr2k	100	94.828	ENSMLUG00000030053	-	100	94.828	Myotis_lucifugus
ENSMUSG00000045996	Polr2k	100	98.276	ENSNGAG00000020950	Polr2k	100	98.276	Nannospalax_galili
ENSMUSG00000045996	Polr2k	100	94.828	ENSNBRG00000013533	polr2k	100	94.828	Neolamprologus_brichardi
ENSMUSG00000045996	Polr2k	91	94.340	ENSNLEG00000031897	-	69	94.340	Nomascus_leucogenys
ENSMUSG00000045996	Polr2k	91	83.019	ENSNLEG00000018544	-	96	83.019	Nomascus_leucogenys
ENSMUSG00000045996	Polr2k	100	98.276	ENSMEUG00000000401	POLR2K	100	98.276	Notamacropus_eugenii
ENSMUSG00000045996	Polr2k	100	98.276	ENSOPRG00000009562	-	100	98.276	Ochotona_princeps
ENSMUSG00000045996	Polr2k	100	79.310	ENSOPRG00000010172	-	100	79.310	Ochotona_princeps
ENSMUSG00000045996	Polr2k	100	86.207	ENSOPRG00000015675	-	100	86.207	Ochotona_princeps
ENSMUSG00000045996	Polr2k	100	86.207	ENSOPRG00000005504	-	100	86.207	Ochotona_princeps
ENSMUSG00000045996	Polr2k	100	96.552	ENSODEG00000004358	-	100	96.552	Octodon_degus
ENSMUSG00000045996	Polr2k	100	87.931	ENSODEG00000020129	-	100	87.931	Octodon_degus
ENSMUSG00000045996	Polr2k	100	96.552	ENSODEG00000019784	-	100	96.552	Octodon_degus
ENSMUSG00000045996	Polr2k	98	91.228	ENSODEG00000019324	-	98	91.228	Octodon_degus
ENSMUSG00000045996	Polr2k	100	94.828	ENSODEG00000018618	-	100	94.828	Octodon_degus
ENSMUSG00000045996	Polr2k	100	93.103	ENSODEG00000020322	-	100	93.103	Octodon_degus
ENSMUSG00000045996	Polr2k	100	98.276	ENSOCUG00000016854	-	100	98.276	Oryctolagus_cuniculus
ENSMUSG00000045996	Polr2k	100	100.000	ENSOCUG00000029376	-	100	100.000	Oryctolagus_cuniculus
ENSMUSG00000045996	Polr2k	100	96.552	ENSORLG00015010501	polr2k	100	96.552	Oryzias_latipes_hsok
ENSMUSG00000045996	Polr2k	100	98.276	ENSOARG00000001480	POLR2K	100	98.276	Ovis_aries
ENSMUSG00000045996	Polr2k	100	98.276	ENSPPAG00000040441	POLR2K	100	98.276	Pan_paniscus
ENSMUSG00000045996	Polr2k	100	98.276	ENSPTRG00000020470	POLR2K	100	98.276	Pan_troglodytes
ENSMUSG00000045996	Polr2k	100	98.276	ENSPANG00000011129	-	100	98.276	Papio_anubis
ENSMUSG00000045996	Polr2k	100	96.552	ENSPSIG00000004097	POLR2K	100	96.552	Pelodiscus_sinensis
ENSMUSG00000045996	Polr2k	100	94.828	ENSPMGG00000022982	polr2k	100	94.828	Periophthalmus_magnuspinnatus
ENSMUSG00000045996	Polr2k	100	98.276	ENSPEMG00000012015	-	100	98.276	Peromyscus_maniculatus_bairdii
ENSMUSG00000045996	Polr2k	100	84.483	ENSPEMG00000001038	-	72	84.483	Peromyscus_maniculatus_bairdii
ENSMUSG00000045996	Polr2k	100	91.379	ENSPEMG00000008788	-	100	91.379	Peromyscus_maniculatus_bairdii
ENSMUSG00000045996	Polr2k	100	96.552	ENSPMEG00000022211	polr2k	100	96.552	Poecilia_mexicana
ENSMUSG00000045996	Polr2k	100	98.276	ENSPPYG00000018786	POLR2K	100	98.276	Pongo_abelii
ENSMUSG00000045996	Polr2k	100	98.276	ENSPCAG00000000746	POLR2K	100	98.276	Procavia_capensis
ENSMUSG00000045996	Polr2k	100	94.828	ENSPCOG00000007173	-	100	94.828	Propithecus_coquereli
ENSMUSG00000045996	Polr2k	100	96.552	ENSPCOG00000026981	-	100	96.552	Propithecus_coquereli
ENSMUSG00000045996	Polr2k	100	98.276	ENSPVAG00000009991	POLR2K	100	98.276	Pteropus_vampyrus
ENSMUSG00000045996	Polr2k	100	94.828	ENSPNYG00000012241	polr2k	100	94.828	Pundamilia_nyererei
ENSMUSG00000045996	Polr2k	100	98.276	ENSRNOG00000010408	Polr2k	100	98.276	Rattus_norvegicus
ENSMUSG00000045996	Polr2k	100	98.276	ENSRBIG00000035082	POLR2K	100	98.276	Rhinopithecus_bieti
ENSMUSG00000045996	Polr2k	98	80.702	ENSRBIG00000032617	-	80	80.702	Rhinopithecus_bieti
ENSMUSG00000045996	Polr2k	98	80.702	ENSRROG00000036861	-	80	80.702	Rhinopithecus_roxellana
ENSMUSG00000045996	Polr2k	100	98.276	ENSRROG00000043844	-	100	98.276	Rhinopithecus_roxellana
ENSMUSG00000045996	Polr2k	100	98.276	ENSSBOG00000010968	-	100	98.276	Saimiri_boliviensis_boliviensis
ENSMUSG00000045996	Polr2k	100	74.138	ENSSBOG00000028601	-	100	74.138	Saimiri_boliviensis_boliviensis
ENSMUSG00000045996	Polr2k	100	96.552	ENSSBOG00000019574	-	100	96.552	Saimiri_boliviensis_boliviensis
ENSMUSG00000045996	Polr2k	100	98.276	ENSSHAG00000006381	POLR2K	100	98.276	Sarcophilus_harrisii
ENSMUSG00000045996	Polr2k	100	94.828	ENSSFOG00015002881	polr2k	100	94.828	Scleropages_formosus
ENSMUSG00000045996	Polr2k	100	98.276	ENSSMAG00000007196	polr2k	100	98.276	Scophthalmus_maximus
ENSMUSG00000045996	Polr2k	100	94.828	ENSSLDG00000013975	polr2k	100	94.828	Seriola_lalandi_dorsalis
ENSMUSG00000045996	Polr2k	88	98.039	ENSSARG00000001557	POLR2K	100	98.039	Sorex_araneus
ENSMUSG00000045996	Polr2k	100	96.552	ENSSPUG00000018205	POLR2K	100	96.552	Sphenodon_punctatus
ENSMUSG00000045996	Polr2k	84	95.918	ENSSSCG00000036795	-	100	95.918	Sus_scrofa
ENSMUSG00000045996	Polr2k	100	89.655	ENSSSCG00000037160	-	100	89.655	Sus_scrofa
ENSMUSG00000045996	Polr2k	100	98.276	ENSSSCG00000021180	POLR2K	100	98.276	Sus_scrofa
ENSMUSG00000045996	Polr2k	100	96.552	ENSTGUG00000012051	-	100	96.552	Taeniopygia_guttata
ENSMUSG00000045996	Polr2k	100	96.552	ENSTGUG00000018366	-	100	96.552	Taeniopygia_guttata
ENSMUSG00000045996	Polr2k	100	98.276	ENSTBEG00000010260	-	100	98.276	Tupaia_belangeri
ENSMUSG00000045996	Polr2k	98	89.474	ENSTBEG00000003799	-	98	89.474	Tupaia_belangeri
ENSMUSG00000045996	Polr2k	100	98.276	ENSTTRG00000007489	POLR2K	100	98.276	Tursiops_truncatus
ENSMUSG00000045996	Polr2k	95	72.727	ENSUAMG00000008073	-	72	78.431	Ursus_americanus
ENSMUSG00000045996	Polr2k	100	98.276	ENSUMAG00000017508	-	100	98.276	Ursus_maritimus
ENSMUSG00000045996	Polr2k	95	72.727	ENSUMAG00000021763	-	72	78.431	Ursus_maritimus
ENSMUSG00000045996	Polr2k	100	98.276	ENSVPAG00000009630	POLR2K	100	98.276	Vicugna_pacos
ENSMUSG00000045996	Polr2k	100	91.379	ENSXETG00000025929	polr2k	100	91.379	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001054	RNA polymerase I activity	21873635.	IBA	Function
GO:0001055	RNA polymerase II activity	21873635.	IBA	Function
GO:0001056	RNA polymerase III activity	21873635.	IBA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005665	RNA polymerase II, core complex	21873635.	IBA	Component
GO:0005665	RNA polymerase II, core complex	-	ISO	Component
GO:0005666	RNA polymerase III complex	21873635.	IBA	Component
GO:0005736	RNA polymerase I complex	21873635.	IBA	Component
GO:0006351	transcription, DNA-templated	-	IEA	Process
GO:0006366	transcription by RNA polymerase II	8329119.	IDA	Process
GO:0006366	transcription by RNA polymerase II	-	ISO	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function