EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000046909 (Gene tree)
Gene ID: 68550
Gene Symbol: Tefm
Alias: 1110002N22Rik|FLJ22729
Full Name: transcription elongation factor%2C mitochondrial
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 5498
Position: chr11: 80136678-80142175
Accession: 1915800
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000136996	-	810	-	ENSMUSP00000122596	56 (aa)	-	F7CPB7
ENSMUST00000050207	-	1309	XM_011249204	ENSMUSP00000059304	364 (aa)	XP_011247506	Q5SSK3
ENSMUST00000131601	-	894	-	ENSMUSP00000114770	221 (aa)	-	B7ZCA9

Gene Model

Click here to download ENSMUSG00000046909's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000046909's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000046909	Tefm	94	67.723	ENSG00000172171	TEFM	96	67.723	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005739	mitochondrion	-	ISO	Component
GO:0005759	mitochondrial matrix	-	ISO	Component
GO:0006119	oxidative phosphorylation	-	ISO	Process
GO:0006390	mitochondrial transcription	-	ISO	Process
GO:0006392	transcription elongation from mitochondrial promoter	-	IEA	Process
GO:0030337	DNA polymerase processivity factor activity	-	ISO	Function
GO:0042645	mitochondrial nucleoid	-	ISO	Component
GO:1990904	ribonucleoprotein complex	-	ISO	Component