EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000047146 (Gene tree)
Gene ID: 52463
Gene Symbol: Tet1
Alias: 2510010B09Rik|BB001228|Cxxc6|D10Ertd17e
Full Name: tet methylcytosine dioxygenase 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 104427
Position: chr10: 62804570-62908996
Accession: 1098693
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000218438	-	414	-	ENSMUSP00000151836	47 (aa)	-	A0A1W2P7E3
ENSMUST00000227494	-	553	-	ENSMUSP00000154527	47 (aa)	-	A0A1W2P7E3
ENSMUST00000173905	-	618	-	ENSMUSP00000134571	68 (aa)	-	G3UZN8
ENSMUST00000174189	-	14369	XM_006513867	ENSMUSP00000133279	2039 (aa)	XP_006513930	E9Q9Y4
ENSMUST00000174121	-	1197	-	ENSMUSP00000134328	399 (aa)	-	G3UZ35
ENSMUST00000173081	-	1505	-	-	- (aa)	-	-
ENSMUST00000173087	-	581	-	ENSMUSP00000133706	138 (aa)	-	G3UXI7
ENSMUST00000228901	-	361	-	ENSMUSP00000154690	47 (aa)	-	A0A1W2P7E3
ENSMUST00000218782	-	463	-	ENSMUSP00000151633	47 (aa)	-	A0A1W2P7E3
ENSMUST00000050826	-	13986	-	ENSMUSP00000059527	2007 (aa)	-	Q3URK3

Gene Model

Click here to download ENSMUSG00000047146's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000047146's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001826	inner cell mass cell differentiation	19372391.20639862.21295276.	IMP	Process
GO:0003677	DNA binding	-	ISO	Function
GO:0005506	iron ion binding	21873635.	IBA	Function
GO:0005506	iron ion binding	-	ISO	Function
GO:0005515	protein binding	21490601.23352454.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	19372391.20639862.	IDA	Component
GO:0006211	5-methylcytosine catabolic process	21873635.	IBA	Process
GO:0006325	chromatin organization	-	IEA	Process
GO:0006493	protein O-linked glycosylation	23352454.	IMP	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0008284	positive regulation of cell proliferation	-	ISO	Process
GO:0016491	oxidoreductase activity	-	IEA	Function
GO:0019827	stem cell population maintenance	19372391.	IMP	Process
GO:0031062	positive regulation of histone methylation	-	ISO	Process
GO:0044030	regulation of DNA methylation	21295276.	IMP	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	23352454.	IMP	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0051213	dioxygenase activity	-	IEA	Function
GO:0055114	oxidation-reduction process	-	IEA	Process
GO:0070579	methylcytosine dioxygenase activity	21873635.	IBA	Function
GO:0070579	methylcytosine dioxygenase activity	19372391.21778364.	IDA	Function
GO:0070579	methylcytosine dioxygenase activity	-	ISO	Function
GO:0070989	oxidative demethylation	21873635.	IBA	Process
GO:0080111	DNA demethylation	21873635.	IBA	Process
GO:0080111	DNA demethylation	20639862.	IDA	Process
GO:0080111	DNA demethylation	19372391.21496894.	IMP	Process
GO:0080111	DNA demethylation	-	ISO	Process
GO:0090310	negative regulation of methylation-dependent chromatin silencing	-	ISO	Process
GO:2000653	regulation of genetic imprinting	24291790.	IMP	Process