EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000047423 (Gene tree)
Gene ID: 107242
Gene Symbol: AI837181
Alias: -
Full Name: expressed sequence AI837181
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 2157 bases
Position: chr19:5425157-5427313
Accession: 2147598
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000125651	DUF1917	PF08939.10	4.2e-15	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000159759	-	1515	-	ENSMUSP00000125651	298 (aa)	-	E9QNR6
ENSMUST00000054477	-	1529	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000047423's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000047423's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000047423	AI837181	92	94.872	ENSG00000175573	C11orf68	100	96.414	Homo_sapiens
ENSMUSG00000047423	AI837181	72	55.300	ENSAPOG00000016581	zgc:63470	95	57.082	Acanthochromis_polyacanthus
ENSMUSG00000047423	AI837181	85	96.032	ENSAMEG00000019183	C11orf68	99	96.032	Ailuropoda_melanoleuca
ENSMUSG00000047423	AI837181	82	55.691	ENSACIG00000015998	zgc:63470	82	56.710	Amphilophus_citrinellus
ENSMUSG00000047423	AI837181	76	56.140	ENSAOCG00000022569	zgc:63470	93	54.839	Amphiprion_ocellaris
ENSMUSG00000047423	AI837181	76	56.140	ENSAPEG00000016099	zgc:63470	93	54.839	Amphiprion_percula
ENSMUSG00000047423	AI837181	83	55.600	ENSATEG00000020036	zgc:63470	95	56.485	Anabas_testudineus
ENSMUSG00000047423	AI837181	100	90.635	ENSANAG00000031627	C11orf68	98	96.735	Aotus_nancymaae
ENSMUSG00000047423	AI837181	82	55.645	ENSACLG00000012158	zgc:63470	94	56.652	Astatotilapia_calliptera
ENSMUSG00000047423	AI837181	92	94.872	ENSBTAG00000006195	C29H11orf68	93	94.872	Bos_taurus
ENSMUSG00000047423	AI837181	92	94.891	ENSCJAG00000001775	C11orf68	94	94.891	Callithrix_jacchus
ENSMUSG00000047423	AI837181	92	94.872	ENSCAFG00000031323	C18H11orf68	92	94.872	Canis_familiaris
ENSMUSG00000047423	AI837181	92	94.872	ENSCAFG00020015319	C11orf68	92	94.872	Canis_lupus_dingo
ENSMUSG00000047423	AI837181	84	96.414	ENSCHIG00000006648	C11orf68	100	96.414	Capra_hircus
ENSMUSG00000047423	AI837181	84	97.610	ENSCAPG00000012494	C11orf68	100	97.610	Cavia_aperea
ENSMUSG00000047423	AI837181	92	95.971	ENSCPOG00000036866	C11orf68	94	95.971	Cavia_porcellus
ENSMUSG00000047423	AI837181	92	94.526	ENSCCAG00000014309	C11orf68	94	94.526	Cebus_capucinus
ENSMUSG00000047423	AI837181	92	94.161	ENSCATG00000032767	C11orf68	98	96.735	Cercocebus_atys
ENSMUSG00000047423	AI837181	84	98.406	ENSCLAG00000018033	C11orf68	100	98.406	Chinchilla_lanigera
ENSMUSG00000047423	AI837181	92	94.872	ENSCSAG00000008060	C11orf68	93	94.872	Chlorocebus_sabaeus
ENSMUSG00000047423	AI837181	78	63.248	ENSCPBG00000023400	C11orf68	94	63.248	Chrysemys_picta_bellii
ENSMUSG00000047423	AI837181	82	96.735	ENSCANG00000040634	C11orf68	98	96.735	Colobus_angolensis_palliatus
ENSMUSG00000047423	AI837181	100	96.644	ENSCGRG00001018309	AI837181	100	96.644	Cricetulus_griseus_chok1gshd
ENSMUSG00000047423	AI837181	84	98.805	ENSCGRG00000020003	AI837181	100	98.805	Cricetulus_griseus_crigri
ENSMUSG00000047423	AI837181	72	51.376	ENSCSEG00000019235	zgc:63470	98	52.743	Cynoglossus_semilaevis
ENSMUSG00000047423	AI837181	82	54.694	ENSCVAG00000023330	zgc:63470	79	55.093	Cyprinodon_variegatus
ENSMUSG00000047423	AI837181	81	56.198	ENSDARG00000019406	zgc:63470	97	56.198	Danio_rerio
ENSMUSG00000047423	AI837181	94	93.950	ENSDNOG00000045982	C11orf68	94	94.872	Dasypus_novemcinctus
ENSMUSG00000047423	AI837181	84	96.825	ENSDORG00000025117	AI837181	100	96.825	Dipodomys_ordii
ENSMUSG00000047423	AI837181	81	95.436	ENSETEG00000016610	C11orf68	96	95.436	Echinops_telfairi
ENSMUSG00000047423	AI837181	92	94.872	ENSEASG00005004433	C11orf68	93	94.872	Equus_asinus_asinus
ENSMUSG00000047423	AI837181	92	94.872	ENSECAG00000039276	C11orf68	51	94.872	Equus_caballus
ENSMUSG00000047423	AI837181	83	54.762	ENSELUG00000013893	zgc:63470	78	54.878	Esox_lucius
ENSMUSG00000047423	AI837181	92	93.066	ENSFCAG00000013276	C11orf68	93	93.066	Felis_catus
ENSMUSG00000047423	AI837181	84	96.813	ENSFDAG00000014475	C11orf68	100	96.813	Fukomys_damarensis
ENSMUSG00000047423	AI837181	78	56.652	ENSFHEG00000022177	zgc:63470	95	56.410	Fundulus_heteroclitus
ENSMUSG00000047423	AI837181	78	54.741	ENSGMOG00000020392	zgc:63470	90	52.564	Gadus_morhua
ENSMUSG00000047423	AI837181	72	55.300	ENSGAFG00000003439	zgc:63470	87	55.300	Gambusia_affinis
ENSMUSG00000047423	AI837181	82	56.452	ENSGACG00000020038	zgc:63470	85	57.940	Gasterosteus_aculeatus
ENSMUSG00000047423	AI837181	82	61.224	ENSGAGG00000008181	C11orf68	98	61.983	Gopherus_agassizii
ENSMUSG00000047423	AI837181	92	94.891	ENSGGOG00000004794	C11orf68	94	94.891	Gorilla_gorilla
ENSMUSG00000047423	AI837181	82	55.645	ENSHBUG00000010267	zgc:63470	94	56.652	Haplochromis_burtoni
ENSMUSG00000047423	AI837181	84	97.211	ENSHGLG00000011881	C11orf68	100	97.211	Heterocephalus_glaber_female
ENSMUSG00000047423	AI837181	84	97.211	ENSHGLG00100016335	C11orf68	100	97.211	Heterocephalus_glaber_male
ENSMUSG00000047423	AI837181	78	52.321	ENSHCOG00000009790	zgc:63470	97	52.321	Hippocampus_comes
ENSMUSG00000047423	AI837181	82	54.918	ENSIPUG00000011545	zgc:63470	82	55.556	Ictalurus_punctatus
ENSMUSG00000047423	AI837181	84	98.008	ENSSTOG00000021433	C11orf68	100	98.008	Ictidomys_tridecemlineatus
ENSMUSG00000047423	AI837181	84	97.211	ENSJJAG00000020360	AI837181	100	97.211	Jaculus_jaculus
ENSMUSG00000047423	AI837181	72	54.378	ENSKMAG00000003796	zgc:63470	95	55.932	Kryptolebias_marmoratus
ENSMUSG00000047423	AI837181	81	56.846	ENSLBEG00000002653	zgc:63470	94	57.940	Labrus_bergylta
ENSMUSG00000047423	AI837181	72	56.682	ENSLACG00000013996	C11orf68	97	57.676	Latimeria_chalumnae
ENSMUSG00000047423	AI837181	80	95.359	ENSLAFG00000009360	C11orf68	96	95.436	Loxodonta_africana
ENSMUSG00000047423	AI837181	92	94.872	ENSMFAG00000035547	C11orf68	98	97.143	Macaca_fascicularis
ENSMUSG00000047423	AI837181	92	94.526	ENSMMUG00000008654	C11orf68	100	96.813	Macaca_mulatta
ENSMUSG00000047423	AI837181	91	94.834	ENSMNEG00000008372	C11orf68	92	94.834	Macaca_nemestrina
ENSMUSG00000047423	AI837181	82	96.327	ENSMLEG00000032046	C11orf68	100	96.327	Mandrillus_leucophaeus
ENSMUSG00000047423	AI837181	82	55.691	ENSMAMG00000003915	zgc:63470	84	56.118	Mastacembelus_armatus
ENSMUSG00000047423	AI837181	82	55.645	ENSMZEG00005008532	zgc:63470	94	56.652	Maylandia_zebra
ENSMUSG00000047423	AI837181	100	96.309	ENSMAUG00000016896	-	100	96.309	Mesocricetus_auratus
ENSMUSG00000047423	AI837181	84	98.008	ENSMAUG00000015164	-	100	98.008	Mesocricetus_auratus
ENSMUSG00000047423	AI837181	92	96.337	ENSMICG00000012852	C11orf68	94	95.985	Microcebus_murinus
ENSMUSG00000047423	AI837181	100	95.973	ENSMOCG00000019637	AI837181	100	95.973	Microtus_ochrogaster
ENSMUSG00000047423	AI837181	81	56.379	ENSMMOG00000012498	zgc:63470	86	56.379	Mola_mola
ENSMUSG00000047423	AI837181	83	54.183	ENSMALG00000004111	zgc:63470	97	54.508	Monopterus_albus
ENSMUSG00000047423	AI837181	100	98.322	MGP_CAROLIEiJ_G0022548	AI837181	100	98.322	Mus_caroli
ENSMUSG00000047423	AI837181	99	97.324	MGP_PahariEiJ_G0014045	AI837181	99	97.324	Mus_pahari
ENSMUSG00000047423	AI837181	84	96.414	ENSMPUG00000019981	C11orf68	100	96.414	Mustela_putorius_furo
ENSMUSG00000047423	AI837181	81	96.266	ENSMLUG00000011061	C11orf68	96	96.266	Myotis_lucifugus
ENSMUSG00000047423	AI837181	100	94.295	ENSNGAG00000001021	AI837181	100	94.295	Nannospalax_galili
ENSMUSG00000047423	AI837181	82	54.839	ENSNBRG00000019736	zgc:63470	94	56.223	Neolamprologus_brichardi
ENSMUSG00000047423	AI837181	82	54.839	ENSNBRG00000011689	zgc:63470	94	56.223	Neolamprologus_brichardi
ENSMUSG00000047423	AI837181	92	94.526	ENSNLEG00000036143	C11orf68	94	94.526	Nomascus_leucogenys
ENSMUSG00000047423	AI837181	82	77.869	ENSMEUG00000009301	C11orf68	96	78.243	Notamacropus_eugenii
ENSMUSG00000047423	AI837181	84	94.024	ENSOPRG00000000611	C11orf68	96	95.436	Ochotona_princeps
ENSMUSG00000047423	AI837181	100	94.631	ENSODEG00000018029	C11orf68	100	94.631	Octodon_degus
ENSMUSG00000047423	AI837181	82	54.435	ENSONIG00000020958	zgc:63470	94	55.794	Oreochromis_niloticus
ENSMUSG00000047423	AI837181	84	80.876	ENSOANG00000014562	C11orf68	96	81.667	Ornithorhynchus_anatinus
ENSMUSG00000047423	AI837181	92	93.066	ENSOCUG00000010947	C11orf68	95	93.066	Oryctolagus_cuniculus
ENSMUSG00000047423	AI837181	82	56.735	ENSORLG00000011109	zgc:63470	98	56.432	Oryzias_latipes
ENSMUSG00000047423	AI837181	81	54.357	ENSORLG00000026406	zgc:63470	85	54.008	Oryzias_latipes
ENSMUSG00000047423	AI837181	82	56.327	ENSORLG00020013239	zgc:63470	84	56.017	Oryzias_latipes_hni
ENSMUSG00000047423	AI837181	82	55.691	ENSORLG00020013234	zgc:63470	85	55.372	Oryzias_latipes_hni
ENSMUSG00000047423	AI837181	82	55.918	ENSORLG00015014819	zgc:63470	98	55.602	Oryzias_latipes_hsok
ENSMUSG00000047423	AI837181	81	54.959	ENSORLG00015014805	zgc:63470	96	54.959	Oryzias_latipes_hsok
ENSMUSG00000047423	AI837181	88	55.894	ENSOMEG00000000837	zgc:63470	90	57.676	Oryzias_melastigma
ENSMUSG00000047423	AI837181	84	96.414	ENSOGAG00000031892	C11orf68	100	96.414	Otolemur_garnettii
ENSMUSG00000047423	AI837181	91	92.279	ENSOARG00000000128	C11orf68	97	92.279	Ovis_aries
ENSMUSG00000047423	AI837181	81	95.851	ENSPPRG00000021719	C11orf68	96	95.851	Panthera_pardus
ENSMUSG00000047423	AI837181	81	95.851	ENSPTIG00000020788	C11orf68	86	95.238	Panthera_tigris_altaica
ENSMUSG00000047423	AI837181	92	95.255	ENSPTRG00000003902	C11H11orf68	94	95.255	Pan_troglodytes
ENSMUSG00000047423	AI837181	91	95.556	ENSPANG00000013651	C11orf68	98	97.143	Papio_anubis
ENSMUSG00000047423	AI837181	77	55.022	ENSPKIG00000007550	zgc:63470	83	55.022	Paramormyrops_kingsleyae
ENSMUSG00000047423	AI837181	82	62.449	ENSPSIG00000000894	C11orf68	99	63.223	Pelodiscus_sinensis
ENSMUSG00000047423	AI837181	83	54.400	ENSPMGG00000008742	zgc:63470	93	56.223	Periophthalmus_magnuspinnatus
ENSMUSG00000047423	AI837181	76	53.247	ENSPMAG00000004804	zgc:63470	93	53.247	Petromyzon_marinus
ENSMUSG00000047423	AI837181	99	71.186	ENSPCIG00000008297	C11orf68	94	73.260	Phascolarctos_cinereus
ENSMUSG00000047423	AI837181	82	54.032	ENSPFOG00000020764	zgc:63470	96	54.812	Poecilia_formosa
ENSMUSG00000047423	AI837181	82	53.629	ENSPLAG00000003399	zgc:63470	95	54.393	Poecilia_latipinna
ENSMUSG00000047423	AI837181	82	54.435	ENSPMEG00000004151	zgc:63470	96	55.230	Poecilia_mexicana
ENSMUSG00000047423	AI837181	82	54.878	ENSPREG00000021977	zgc:63470	78	55.696	Poecilia_reticulata
ENSMUSG00000047423	AI837181	84	97.211	ENSPPYG00000003040	C11orf68	100	97.211	Pongo_abelii
ENSMUSG00000047423	AI837181	81	95.021	ENSPCAG00000011083	C11orf68	96	95.021	Procavia_capensis
ENSMUSG00000047423	AI837181	92	96.364	ENSPCOG00000003847	C11orf68	92	96.350	Propithecus_coquereli
ENSMUSG00000047423	AI837181	69	91.707	ENSPVAG00000016966	C11orf68	98	92.157	Pteropus_vampyrus
ENSMUSG00000047423	AI837181	82	55.645	ENSPNYG00000019618	zgc:63470	94	56.652	Pundamilia_nyererei
ENSMUSG00000047423	AI837181	78	54.077	ENSPNAG00000014971	zgc:63470	98	52.869	Pygocentrus_nattereri
ENSMUSG00000047423	AI837181	100	97.315	ENSRNOG00000020551	Bles03	100	97.315	Rattus_norvegicus
ENSMUSG00000047423	AI837181	86	95.703	ENSRBIG00000033115	C11orf68	93	96.825	Rhinopithecus_bieti
ENSMUSG00000047423	AI837181	85	96.032	ENSSBOG00000034720	C11orf68	91	96.032	Saimiri_boliviensis_boliviensis
ENSMUSG00000047423	AI837181	84	76.400	ENSSHAG00000001365	C11orf68	95	77.731	Sarcophilus_harrisii
ENSMUSG00000047423	AI837181	81	57.261	ENSSFOG00015015590	zgc:63470	97	57.261	Scleropages_formosus
ENSMUSG00000047423	AI837181	93	50.355	ENSSMAG00000014883	zgc:63470	84	54.812	Scophthalmus_maximus
ENSMUSG00000047423	AI837181	78	56.223	ENSSDUG00000017554	zgc:63470	95	56.223	Seriola_dumerili
ENSMUSG00000047423	AI837181	92	95.604	ENSSSCG00000012966	C11orf68	89	95.604	Sus_scrofa
ENSMUSG00000047423	AI837181	84	54.150	ENSTRUG00000008748	zgc:63470	91	55.932	Takifugu_rubripes
ENSMUSG00000047423	AI837181	81	84.232	ENSTBEG00000011837	C11orf68	96	84.232	Tupaia_belangeri
ENSMUSG00000047423	AI837181	84	96.414	ENSTTRG00000008820	C11orf68	100	96.414	Tursiops_truncatus
ENSMUSG00000047423	AI837181	90	92.164	ENSUAMG00000020782	C11orf68	94	92.164	Ursus_americanus
ENSMUSG00000047423	AI837181	85	96.032	ENSUMAG00000010858	C11orf68	94	96.032	Ursus_maritimus
ENSMUSG00000047423	AI837181	81	97.095	ENSVVUG00000027047	C11orf68	81	97.095	Vulpes_vulpes
ENSMUSG00000047423	AI837181	80	55.042	ENSXETG00000020535	c11orf68	96	55.042	Xenopus_tropicalis
ENSMUSG00000047423	AI837181	79	56.303	ENSXCOG00000005700	zgc:63470	83	57.205	Xiphophorus_couchianus
ENSMUSG00000047423	AI837181	71	58.879	ENSXMAG00000019661	zgc:63470	79	58.879	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005575	cellular_component	-	ND	Component
GO:0008150	biological_process	-	ND	Process