EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000146301	-	3174	-	-	- (aa)	-	-
ENSMUST00000049575	-	1004	XM_006517418	ENSMUSP00000053371	229 (aa)	XP_006517481	Q6IRU5
ENSMUST00000091609	-	2186	-	ENSMUSP00000089198	211 (aa)	-	Q6IRU5
ENSMUST00000140142	-	584	-	ENSMUSP00000122336	123 (aa)	-	F7BHJ0

Gene Model

Pathways

Pathway ID	Pathway Name	Source
mmu04142	Lysosome	KEGG
mmu04144	Endocytosis	KEGG
mmu04721	Synaptic vesicle cycle	KEGG
mmu04961	Endocrine and other factor-regulated calcium reabsorption	KEGG
mmu05016	Huntington disease	KEGG
mmu05100	Bacterial invasion of epithelial cells	KEGG

Protein-Protein Interaction (PPI)

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005198	structural molecule activity	-	IEA	Function
GO:0005802	trans-Golgi network	20427320.	IDA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005886	plasma membrane	21873635.	IBA	Component
GO:0005886	plasma membrane	20427320.	IDA	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0005905	clathrin-coated pit	-	IEA	Component
GO:0006886	intracellular protein transport	-	IEA	Process
GO:0016020	membrane	-	IEA	Component
GO:0016192	vesicle-mediated transport	-	IEA	Process
GO:0030118	clathrin coat	-	ISO	Component
GO:0030125	clathrin vesicle coat	21873635.	IBA	Component
GO:0030130	clathrin coat of trans-Golgi network vesicle	-	IEA	Component
GO:0030132	clathrin coat of coated pit	-	IEA	Component
GO:0030672	synaptic vesicle membrane	21873635.	IBA	Component
GO:0030672	synaptic vesicle membrane	-	ISO	Component
GO:0031410	cytoplasmic vesicle	-	IEA	Component
GO:0032050	clathrin heavy chain binding	21873635.	IBA	Function
GO:0042277	peptide binding	-	ISO	Function
GO:0043231	intracellular membrane-bounded organelle	-	ISO	Component
GO:0048268	clathrin coat assembly	21873635.	IBA	Process
GO:0060170	ciliary membrane	20427320.	IDA	Component
GO:0072583	clathrin-dependent endocytosis	21873635.	IBA	Process
GO:0098835	presynaptic endocytic zone membrane	-	ISO	Component
GO:0099631	postsynaptic endocytic zone cytoplasmic component	21873635.	IBA	Component