EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000047583 (Gene tree)
Gene ID: 209584
Gene Symbol: Tyw3
Alias: 5230400J09Rik
Full Name: tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 20674 bases
Position: chr3:154576431-154597104
Accession: 2445040
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000057828	TYW3	PF02676.14	6.7e-57	1	1
ENSMUSP00000131461	TYW3	PF02676.14	4.1e-39	1	1
ENSMUSP00000114437	TYW3	PF02676.14	1.6e-29	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000170461	-	4270	-	ENSMUSP00000131461	144 (aa)	-	E9PYE2
ENSMUST00000122976	-	488	-	ENSMUSP00000114437	159 (aa)	-	D3YVH5
ENSMUST00000148680	-	627	-	-	- (aa)	-	-
ENSMUST00000052774	-	4490	-	ENSMUSP00000057828	257 (aa)	-	Q8BSA9

Gene Model

Click here to download ENSMUSG00000047583's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000047583's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000047583	Tyw3	100	77.083	ENSG00000162623	TYW3	100	89.286	Homo_sapiens
ENSMUSG00000047583	Tyw3	94	65.441	ENSAPOG00000009462	tyw3	74	64.796	Acanthochromis_polyacanthus
ENSMUSG00000047583	Tyw3	100	78.472	ENSAMEG00000003461	TYW3	99	70.543	Ailuropoda_melanoleuca
ENSMUSG00000047583	Tyw3	100	60.417	ENSACIG00000002242	tyw3	92	58.447	Amphilophus_citrinellus
ENSMUSG00000047583	Tyw3	94	62.222	ENSAOCG00000002161	tyw3	73	63.077	Amphiprion_ocellaris
ENSMUSG00000047583	Tyw3	77	47.748	ENSAPEG00000009395	tyw3	96	56.190	Amphiprion_percula
ENSMUSG00000047583	Tyw3	94	59.559	ENSATEG00000004411	-	76	63.687	Anabas_testudineus
ENSMUSG00000047583	Tyw3	94	59.559	ENSATEG00000004518	tyw3	76	63.687	Anabas_testudineus
ENSMUSG00000047583	Tyw3	97	57.616	ENSACAG00000011380	TYW3	88	56.962	Anolis_carolinensis
ENSMUSG00000047583	Tyw3	100	76.389	ENSANAG00000034485	TYW3	99	71.705	Aotus_nancymaae
ENSMUSG00000047583	Tyw3	94	62.590	ENSACLG00000022833	tyw3	79	62.105	Astatotilapia_calliptera
ENSMUSG00000047583	Tyw3	100	56.944	ENSAMXG00000039965	tyw3	99	50.196	Astyanax_mexicanus
ENSMUSG00000047583	Tyw3	100	77.083	ENSBTAG00000005196	TYW3	99	69.380	Bos_taurus
ENSMUSG00000047583	Tyw3	100	77.778	ENSCJAG00000006550	TYW3	99	71.984	Callithrix_jacchus
ENSMUSG00000047583	Tyw3	82	68.692	ENSCAFG00000032209	TYW3	99	68.692	Canis_familiaris
ENSMUSG00000047583	Tyw3	99	76.224	ENSCAFG00020017095	TYW3	92	70.817	Canis_lupus_dingo
ENSMUSG00000047583	Tyw3	100	78.472	ENSCHIG00000009333	TYW3	99	70.543	Capra_hircus
ENSMUSG00000047583	Tyw3	93	70.124	ENSTSYG00000006369	TYW3	97	70.124	Carlito_syrichta
ENSMUSG00000047583	Tyw3	100	78.472	ENSCCAG00000034210	TYW3	99	72.868	Cebus_capucinus
ENSMUSG00000047583	Tyw3	100	77.778	ENSCATG00000044397	TYW3	98	72.441	Cercocebus_atys
ENSMUSG00000047583	Tyw3	100	77.778	ENSCLAG00000004370	TYW3	95	73.256	Chinchilla_lanigera
ENSMUSG00000047583	Tyw3	100	77.778	ENSCSAG00000001387	TYW3	98	72.441	Chlorocebus_sabaeus
ENSMUSG00000047583	Tyw3	82	76.271	ENSCHOG00000005179	TYW3	68	76.271	Choloepus_hoffmanni
ENSMUSG00000047583	Tyw3	97	64.336	ENSCPBG00000017047	TYW3	99	58.268	Chrysemys_picta_bellii
ENSMUSG00000047583	Tyw3	100	76.389	ENSCANG00000036108	TYW3	98	71.654	Colobus_angolensis_palliatus
ENSMUSG00000047583	Tyw3	100	88.194	ENSCGRG00001022820	Tyw3	100	88.194	Cricetulus_griseus_chok1gshd
ENSMUSG00000047583	Tyw3	77	79.397	ENSCGRG00000003132	Tyw3	100	88.372	Cricetulus_griseus_crigri
ENSMUSG00000047583	Tyw3	100	59.310	ENSCSEG00000021219	tyw3	72	61.386	Cynoglossus_semilaevis
ENSMUSG00000047583	Tyw3	95	59.854	ENSCVAG00000003270	tyw3	90	53.419	Cyprinodon_variegatus
ENSMUSG00000047583	Tyw3	96	56.522	ENSDARG00000038222	tyw3	97	48.387	Danio_rerio
ENSMUSG00000047583	Tyw3	100	76.389	ENSDNOG00000033863	TYW3	98	72.222	Dasypus_novemcinctus
ENSMUSG00000047583	Tyw3	53	64.748	ENSDORG00000002718	-	99	64.748	Dipodomys_ordii
ENSMUSG00000047583	Tyw3	75	68.159	ENSETEG00000012572	TYW3	98	68.159	Echinops_telfairi
ENSMUSG00000047583	Tyw3	58	51.807	ENSEBUG00000014020	tyw3	54	50.000	Eptatretus_burgeri
ENSMUSG00000047583	Tyw3	100	82.639	ENSEASG00005007776	TYW3	99	73.077	Equus_asinus_asinus
ENSMUSG00000047583	Tyw3	100	82.639	ENSECAG00000007888	TYW3	99	73.077	Equus_caballus
ENSMUSG00000047583	Tyw3	100	62.500	ENSEEUG00000009289	TYW3	98	60.236	Erinaceus_europaeus
ENSMUSG00000047583	Tyw3	97	56.835	ENSELUG00000023000	tyw3	89	55.405	Esox_lucius
ENSMUSG00000047583	Tyw3	100	79.167	ENSFCAG00000035340	TYW3	99	72.481	Felis_catus
ENSMUSG00000047583	Tyw3	100	77.778	ENSFDAG00000003816	TYW3	99	70.930	Fukomys_damarensis
ENSMUSG00000047583	Tyw3	94	61.481	ENSFHEG00000001347	tyw3	79	61.538	Fundulus_heteroclitus
ENSMUSG00000047583	Tyw3	97	60.690	ENSGALG00000032549	TYW3	98	55.985	Gallus_gallus
ENSMUSG00000047583	Tyw3	94	62.963	ENSGAFG00000012457	tyw3	82	59.174	Gambusia_affinis
ENSMUSG00000047583	Tyw3	94	60.741	ENSGACG00000014630	tyw3	86	62.051	Gasterosteus_aculeatus
ENSMUSG00000047583	Tyw3	100	77.083	ENSGGOG00000013676	TYW3	99	69.767	Gorilla_gorilla
ENSMUSG00000047583	Tyw3	72	60.577	ENSHBUG00000007007	-	100	60.577	Haplochromis_burtoni
ENSMUSG00000047583	Tyw3	100	77.083	ENSHGLG00000004440	TYW3	99	72.093	Heterocephalus_glaber_female
ENSMUSG00000047583	Tyw3	100	70.833	ENSHGLG00100018315	TYW3	99	68.605	Heterocephalus_glaber_male
ENSMUSG00000047583	Tyw3	94	54.412	ENSHCOG00000016590	TYW3	98	54.455	Hippocampus_comes
ENSMUSG00000047583	Tyw3	100	58.333	ENSIPUG00000012907	tyw3	67	59.296	Ictalurus_punctatus
ENSMUSG00000047583	Tyw3	99	67.606	ENSSTOG00000028816	TYW3	94	65.116	Ictidomys_tridecemlineatus
ENSMUSG00000047583	Tyw3	100	80.556	ENSJJAG00000005103	-	100	80.556	Jaculus_jaculus
ENSMUSG00000047583	Tyw3	94	65.185	ENSKMAG00000020761	tyw3	70	65.285	Kryptolebias_marmoratus
ENSMUSG00000047583	Tyw3	92	60.150	ENSLBEG00000021318	tyw3	74	62.011	Labrus_bergylta
ENSMUSG00000047583	Tyw3	100	58.333	ENSLACG00000012636	TYW3	99	50.973	Latimeria_chalumnae
ENSMUSG00000047583	Tyw3	100	56.250	ENSLOCG00000003437	tyw3	100	50.385	Lepisosteus_oculatus
ENSMUSG00000047583	Tyw3	100	74.306	ENSLAFG00000011373	TYW3	98	70.472	Loxodonta_africana
ENSMUSG00000047583	Tyw3	100	76.389	ENSMFAG00000003496	TYW3	98	71.654	Macaca_fascicularis
ENSMUSG00000047583	Tyw3	100	61.111	ENSMMUG00000014595	TYW3	98	62.992	Macaca_mulatta
ENSMUSG00000047583	Tyw3	100	76.389	ENSMNEG00000028346	TYW3	98	71.654	Macaca_nemestrina
ENSMUSG00000047583	Tyw3	100	77.778	ENSMLEG00000041647	TYW3	98	72.047	Mandrillus_leucophaeus
ENSMUSG00000047583	Tyw3	100	59.722	ENSMAMG00000010987	tyw3	76	63.184	Mastacembelus_armatus
ENSMUSG00000047583	Tyw3	98	63.830	ENSMZEG00005023808	tyw3	75	62.687	Maylandia_zebra
ENSMUSG00000047583	Tyw3	65	54.971	ENSMGAG00000012152	TYW3	98	54.971	Meleagris_gallopavo
ENSMUSG00000047583	Tyw3	100	53.696	ENSMAUG00000000522	Tyw3	99	79.070	Mesocricetus_auratus
ENSMUSG00000047583	Tyw3	100	80.556	ENSMICG00000015883	TYW3	97	76.357	Microcebus_murinus
ENSMUSG00000047583	Tyw3	72	92.593	ENSMOCG00000021348	Tyw3	97	80.000	Microtus_ochrogaster
ENSMUSG00000047583	Tyw3	92	62.406	ENSMMOG00000021442	tyw3	89	55.310	Mola_mola
ENSMUSG00000047583	Tyw3	100	72.222	ENSMODG00000019082	TYW3	91	63.780	Monodelphis_domestica
ENSMUSG00000047583	Tyw3	100	61.111	ENSMALG00000014442	tyw3	75	63.184	Monopterus_albus
ENSMUSG00000047583	Tyw3	100	99.306	MGP_CAROLIEiJ_G0025755	Tyw3	100	99.306	Mus_caroli
ENSMUSG00000047583	Tyw3	100	95.833	MGP_PahariEiJ_G0027206	Tyw3	100	95.833	Mus_pahari
ENSMUSG00000047583	Tyw3	100	99.371	MGP_SPRETEiJ_G0026708	Tyw3	100	99.371	Mus_spretus
ENSMUSG00000047583	Tyw3	100	80.556	ENSMPUG00000010967	TYW3	99	71.318	Mustela_putorius_furo
ENSMUSG00000047583	Tyw3	100	78.472	ENSMLUG00000005999	TYW3	99	70.656	Myotis_lucifugus
ENSMUSG00000047583	Tyw3	100	81.250	ENSNGAG00000000586	-	99	81.250	Nannospalax_galili
ENSMUSG00000047583	Tyw3	100	77.778	ENSNLEG00000009556	TYW3	99	72.763	Nomascus_leucogenys
ENSMUSG00000047583	Tyw3	82	74.576	ENSOPRG00000014182	TYW3	99	52.326	Ochotona_princeps
ENSMUSG00000047583	Tyw3	100	78.472	ENSODEG00000005361	TYW3	99	78.472	Octodon_degus
ENSMUSG00000047583	Tyw3	100	62.500	ENSONIG00000019965	tyw3	100	62.814	Oreochromis_niloticus
ENSMUSG00000047583	Tyw3	74	58.333	ENSOANG00000002172	-	95	58.333	Ornithorhynchus_anatinus
ENSMUSG00000047583	Tyw3	100	75.000	ENSOCUG00000003043	TYW3	99	69.380	Oryctolagus_cuniculus
ENSMUSG00000047583	Tyw3	96	59.420	ENSORLG00000004470	tyw3	89	55.947	Oryzias_latipes
ENSMUSG00000047583	Tyw3	96	58.696	ENSORLG00020003793	tyw3	76	62.371	Oryzias_latipes_hni
ENSMUSG00000047583	Tyw3	96	60.145	ENSORLG00015006950	tyw3	89	55.947	Oryzias_latipes_hsok
ENSMUSG00000047583	Tyw3	94	62.963	ENSOMEG00000016176	tyw3	95	61.111	Oryzias_melastigma
ENSMUSG00000047583	Tyw3	100	77.778	ENSOGAG00000011590	-	94	74.074	Otolemur_garnettii
ENSMUSG00000047583	Tyw3	100	69.655	ENSOGAG00000025029	-	99	66.667	Otolemur_garnettii
ENSMUSG00000047583	Tyw3	100	77.778	ENSOARG00000012508	TYW3	99	69.767	Ovis_aries
ENSMUSG00000047583	Tyw3	100	76.389	ENSPPAG00000043438	TYW3	99	70.155	Pan_paniscus
ENSMUSG00000047583	Tyw3	100	79.167	ENSPPRG00000023209	TYW3	99	73.047	Panthera_pardus
ENSMUSG00000047583	Tyw3	100	79.167	ENSPTIG00000017448	TYW3	99	72.093	Panthera_tigris_altaica
ENSMUSG00000047583	Tyw3	100	77.083	ENSPTRG00000000867	TYW3	99	70.155	Pan_troglodytes
ENSMUSG00000047583	Tyw3	100	77.778	ENSPANG00000013397	TYW3	98	72.441	Papio_anubis
ENSMUSG00000047583	Tyw3	94	50.943	ENSPKIG00000009802	tyw3	92	48.837	Paramormyrops_kingsleyae
ENSMUSG00000047583	Tyw3	65	60.947	ENSPSIG00000008432	TYW3	99	60.947	Pelodiscus_sinensis
ENSMUSG00000047583	Tyw3	94	58.824	ENSPMGG00000005290	tyw3	79	56.284	Periophthalmus_magnuspinnatus
ENSMUSG00000047583	Tyw3	100	93.750	ENSPEMG00000013100	Tyw3	100	93.750	Peromyscus_maniculatus_bairdii
ENSMUSG00000047583	Tyw3	100	77.778	ENSPCIG00000024204	TYW3	81	67.480	Phascolarctos_cinereus
ENSMUSG00000047583	Tyw3	98	62.411	ENSPFOG00000000927	tyw3	85	57.642	Poecilia_formosa
ENSMUSG00000047583	Tyw3	98	62.411	ENSPLAG00000009891	tyw3	85	57.205	Poecilia_latipinna
ENSMUSG00000047583	Tyw3	98	62.411	ENSPMEG00000002006	tyw3	81	67.241	Poecilia_mexicana
ENSMUSG00000047583	Tyw3	98	60.284	ENSPREG00000012341	tyw3	85	56.332	Poecilia_reticulata
ENSMUSG00000047583	Tyw3	100	77.778	ENSPPYG00000001234	TYW3	99	71.705	Pongo_abelii
ENSMUSG00000047583	Tyw3	100	74.306	ENSPCAG00000000524	TYW3	99	70.039	Procavia_capensis
ENSMUSG00000047583	Tyw3	100	81.250	ENSPCOG00000023207	TYW3	97	76.744	Propithecus_coquereli
ENSMUSG00000047583	Tyw3	100	76.389	ENSPVAG00000002356	TYW3	99	68.750	Pteropus_vampyrus
ENSMUSG00000047583	Tyw3	98	62.069	ENSPNYG00000017982	tyw3	63	61.084	Pundamilia_nyererei
ENSMUSG00000047583	Tyw3	100	56.944	ENSPNAG00000028431	tyw3	99	50.988	Pygocentrus_nattereri
ENSMUSG00000047583	Tyw3	100	93.750	ENSRNOG00000028328	Tyw3	88	88.760	Rattus_norvegicus
ENSMUSG00000047583	Tyw3	52	69.403	ENSRBIG00000040137	-	97	69.403	Rhinopithecus_bieti
ENSMUSG00000047583	Tyw3	100	75.000	ENSRROG00000034171	TYW3	98	70.866	Rhinopithecus_roxellana
ENSMUSG00000047583	Tyw3	81	33.562	YGL050W	-	88	30.279	Saccharomyces_cerevisiae
ENSMUSG00000047583	Tyw3	100	77.083	ENSSBOG00000022917	TYW3	99	71.984	Saimiri_boliviensis_boliviensis
ENSMUSG00000047583	Tyw3	99	58.451	ENSSFOG00015021842	tyw3	99	50.196	Scleropages_formosus
ENSMUSG00000047583	Tyw3	98	60.284	ENSSMAG00000019609	tyw3	79	62.189	Scophthalmus_maximus
ENSMUSG00000047583	Tyw3	96	62.319	ENSSDUG00000003674	tyw3	73	64.103	Seriola_dumerili
ENSMUSG00000047583	Tyw3	96	62.319	ENSSLDG00000010425	tyw3	85	58.667	Seriola_lalandi_dorsalis
ENSMUSG00000047583	Tyw3	76	64.796	ENSSARG00000001097	TYW3	98	64.796	Sorex_araneus
ENSMUSG00000047583	Tyw3	97	62.937	ENSSPUG00000007880	TYW3	98	57.312	Sphenodon_punctatus
ENSMUSG00000047583	Tyw3	94	62.500	ENSSPAG00000013786	tyw3	71	63.776	Stegastes_partitus
ENSMUSG00000047583	Tyw3	100	75.000	ENSSSCG00000003779	TYW3	99	68.582	Sus_scrofa
ENSMUSG00000047583	Tyw3	97	61.151	ENSTRUG00000023563	tyw3	89	56.067	Takifugu_rubripes
ENSMUSG00000047583	Tyw3	97	59.712	ENSTNIG00000003368	tyw3	97	61.257	Tetraodon_nigroviridis
ENSMUSG00000047583	Tyw3	100	79.167	ENSTBEG00000017002	TYW3	99	72.093	Tupaia_belangeri
ENSMUSG00000047583	Tyw3	100	79.167	ENSTTRG00000010464	TYW3	99	73.180	Tursiops_truncatus
ENSMUSG00000047583	Tyw3	100	78.472	ENSUAMG00000010803	TYW3	99	71.825	Ursus_americanus
ENSMUSG00000047583	Tyw3	100	78.472	ENSUMAG00000006460	TYW3	98	72.112	Ursus_maritimus
ENSMUSG00000047583	Tyw3	100	79.167	ENSVPAG00000006900	TYW3	99	82.162	Vicugna_pacos
ENSMUSG00000047583	Tyw3	99	76.224	ENSVVUG00000006902	TYW3	92	70.039	Vulpes_vulpes
ENSMUSG00000047583	Tyw3	100	59.722	ENSXETG00000002996	tyw3	88	57.658	Xenopus_tropicalis
ENSMUSG00000047583	Tyw3	98	62.676	ENSXCOG00000000715	tyw3	73	64.021	Xiphophorus_couchianus
ENSMUSG00000047583	Tyw3	98	62.676	ENSXMAG00000006464	tyw3	76	64.021	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0008033	tRNA processing	-	IEA	Process
GO:0008168	methyltransferase activity	-	IEA	Function
GO:0008175	tRNA methyltransferase activity	21873635.	IBA	Function
GO:0016740	transferase activity	-	IEA	Function
GO:0030488	tRNA methylation	21873635.	IBA	Process
GO:0031591	wybutosine biosynthetic process	21873635.	IBA	Process
GO:0032259	methylation	-	IEA	Process