EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000047603 (Gene tree)
Gene ID: 56525
Gene Symbol: Zfp235
Alias: 0610030O19Rik
Full Name: zinc finger protein 235
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 9073 bases
Position: chr7:24134169-24143241
Accession: 1929117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000050803	zf-C2H2	PF00096.26	3.7e-79	1	13
ENSMUSP00000050803	zf-C2H2	PF00096.26	3.7e-79	2	13
ENSMUSP00000050803	zf-C2H2	PF00096.26	3.7e-79	3	13
ENSMUSP00000050803	zf-C2H2	PF00096.26	3.7e-79	4	13
ENSMUSP00000050803	zf-C2H2	PF00096.26	3.7e-79	5	13
ENSMUSP00000050803	zf-C2H2	PF00096.26	3.7e-79	6	13
ENSMUSP00000050803	zf-C2H2	PF00096.26	3.7e-79	7	13
ENSMUSP00000050803	zf-C2H2	PF00096.26	3.7e-79	8	13
ENSMUSP00000050803	zf-C2H2	PF00096.26	3.7e-79	9	13
ENSMUSP00000050803	zf-C2H2	PF00096.26	3.7e-79	10	13
ENSMUSP00000050803	zf-C2H2	PF00096.26	3.7e-79	11	13
ENSMUSP00000050803	zf-C2H2	PF00096.26	3.7e-79	12	13
ENSMUSP00000050803	zf-C2H2	PF00096.26	3.7e-79	13	13
ENSMUSP00000050803	zf-met	PF12874.7	3.1e-06	1	3
ENSMUSP00000050803	zf-met	PF12874.7	3.1e-06	2	3
ENSMUSP00000050803	zf-met	PF12874.7	3.1e-06	3	3

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000205834	-	1933	-	-	- (aa)	-	-
ENSMUST00000205736	-	1297	-	-	- (aa)	-	-
ENSMUST00000205740	-	494	-	-	- (aa)	-	-
ENSMUST00000206809	-	1024	-	-	- (aa)	-	-
ENSMUST00000205680	-	1332	XM_011250655	ENSMUSP00000145993	332 (aa)	XP_017177866	A0A0U1RPI4
ENSMUST00000056549	-	3373	XM_017322378	ENSMUSP00000050803	702 (aa)	XP_017177867	Q499D5

Gene Model

Click here to download ENSMUSG00000047603's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000047603's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000047603	Zfp235	99	43.544	ENSMUSG00000089857	Zfp882	99	43.544
ENSMUSG00000047603	Zfp235	100	47.291	ENSMUSG00000017667	Zfp334	99	43.787
ENSMUSG00000047603	Zfp235	99	49.886	ENSMUSG00000063108	Zfp26	89	49.886
ENSMUSG00000047603	Zfp235	67	34.559	ENSMUSG00000052751	Repin1	98	46.591
ENSMUSG00000047603	Zfp235	78	57.778	ENSMUSG00000048728	Zfp454	98	51.220
ENSMUSG00000047603	Zfp235	61	41.880	ENSMUSG00000023902	Zscan10	79	47.009
ENSMUSG00000047603	Zfp235	99	57.098	ENSMUSG00000022526	Zfp251	96	57.098
ENSMUSG00000047603	Zfp235	99	53.957	ENSMUSG00000050605	Zfp61	99	50.498
ENSMUSG00000047603	Zfp235	99	46.204	ENSMUSG00000057396	Zfp759	100	46.204
ENSMUSG00000047603	Zfp235	72	56.553	ENSMUSG00000058402	Zfp420	99	56.553
ENSMUSG00000047603	Zfp235	62	56.115	ENSMUSG00000047371	Zfp768	51	56.071
ENSMUSG00000047603	Zfp235	100	61.702	ENSMUSG00000052675	Zfp112	99	61.702
ENSMUSG00000047603	Zfp235	100	63.407	ENSMUSG00000030486	Zfp108	99	75.259
ENSMUSG00000047603	Zfp235	64	41.667	ENSMUSG00000049755	Zfp672	99	41.333
ENSMUSG00000047603	Zfp235	99	66.396	ENSMUSG00000068962	Zfp114	99	67.532
ENSMUSG00000047603	Zfp235	99	52.414	ENSMUSG00000062743	Zfp677	99	52.414
ENSMUSG00000047603	Zfp235	99	49.482	ENSMUSG00000057551	Zfp317	90	49.482
ENSMUSG00000047603	Zfp235	99	48.244	ENSMUSG00000023892	Zfp51	94	48.244
ENSMUSG00000047603	Zfp235	95	76.935	ENSMUSG00000055305	Zfp93	99	77.679
ENSMUSG00000047603	Zfp235	74	45.070	ENSMUSG00000070709	Zfp974	91	45.070
ENSMUSG00000047603	Zfp235	99	41.102	ENSMUSG00000056019	Zfp709	99	45.549
ENSMUSG00000047603	Zfp235	99	49.234	ENSMUSG00000114923	Gm49345	98	50.350
ENSMUSG00000047603	Zfp235	99	55.607	ENSMUSG00000091474	2610021A01Rik	98	55.607
ENSMUSG00000047603	Zfp235	66	46.181	ENSMUSG00000030823	9130019O22Rik	78	44.472
ENSMUSG00000047603	Zfp235	99	48.115	ENSMUSG00000020364	Zfp354a	98	49.052
ENSMUSG00000047603	Zfp235	99	51.276	ENSMUSG00000069743	Zfp820	98	51.276
ENSMUSG00000047603	Zfp235	100	56.447	ENSMUSG00000074282	Zfp94	96	56.447
ENSMUSG00000047603	Zfp235	99	47.897	ENSMUSG00000059142	Zfp945	99	48.700
ENSMUSG00000047603	Zfp235	99	46.499	ENSMUSG00000092416	Zfp141	98	46.218
ENSMUSG00000047603	Zfp235	99	51.276	ENSMUSG00000012640	Zfp715	95	51.276
ENSMUSG00000047603	Zfp235	79	47.696	ENSMUSG00000054519	Zfp867	96	47.696
ENSMUSG00000047603	Zfp235	79	53.333	ENSMUSG00000095432	Zfp748	97	53.333
ENSMUSG00000047603	Zfp235	75	48.571	ENSMUSG00000074472	Zfp872	93	50.000
ENSMUSG00000047603	Zfp235	71	44.248	ENSMUSG00000006215	Zbtb17	62	43.182
ENSMUSG00000047603	Zfp235	70	53.378	ENSMUSG00000074824	Rslcan18	65	53.378
ENSMUSG00000047603	Zfp235	61	38.095	ENSMUSG00000074406	Zfp628	61	36.686
ENSMUSG00000047603	Zfp235	93	57.826	ENSMUSG00000087598	Zfp111	99	57.826

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000047603	Zfp235	100	50.351	ENSG00000159915	ZNF233	99	46.619	Homo_sapiens
ENSMUSG00000047603	Zfp235	100	53.285	ENSAMEG00000006122	ZNF233	99	52.120	Ailuropoda_melanoleuca
ENSMUSG00000047603	Zfp235	100	51.629	ENSCATG00000015076	ZNF233	98	51.629	Cercocebus_atys
ENSMUSG00000047603	Zfp235	99	51.869	ENSCSAG00000003326	ZNF233	99	51.869	Chlorocebus_sabaeus
ENSMUSG00000047603	Zfp235	100	52.077	ENSCHOG00000010443	ZNF233	99	52.077	Choloepus_hoffmanni
ENSMUSG00000047603	Zfp235	100	64.889	ENSCANG00000032081	ZNF233	99	64.889	Colobus_angolensis_palliatus
ENSMUSG00000047603	Zfp235	99	56.904	ENSCGRG00000015809	-	99	56.904	Cricetulus_griseus_crigri
ENSMUSG00000047603	Zfp235	100	55.430	ENSCGRG00000015629	-	100	56.153	Cricetulus_griseus_crigri
ENSMUSG00000047603	Zfp235	99	56.623	ENSDNOG00000038729	ZNF233	99	56.623	Dasypus_novemcinctus
ENSMUSG00000047603	Zfp235	61	55.422	ENSFALG00000009044	-	100	55.422	Ficedula_albicollis
ENSMUSG00000047603	Zfp235	93	51.522	ENSGGOG00000013940	ZNF233	93	45.482	Gorilla_gorilla
ENSMUSG00000047603	Zfp235	100	51.799	ENSMFAG00000039215	ZNF233	99	51.493	Macaca_fascicularis
ENSMUSG00000047603	Zfp235	100	51.559	ENSMMUG00000012797	ZNF233	99	51.244	Macaca_mulatta
ENSMUSG00000047603	Zfp235	81	55.963	ENSMZEG00005024630	-	99	55.963	Maylandia_zebra
ENSMUSG00000047603	Zfp235	100	52.048	ENSMICG00000016725	ZNF233	98	46.866	Microcebus_murinus
ENSMUSG00000047603	Zfp235	100	97.863	MGP_CAROLIEiJ_G0029322	Zfp235	100	97.863	Mus_caroli
ENSMUSG00000047603	Zfp235	100	62.611	MGP_CAROLIEiJ_G0029326	Zfp108	99	72.239	Mus_caroli
ENSMUSG00000047603	Zfp235	94	74.281	MGP_CAROLIEiJ_G0029327	Zfp93	99	72.524	Mus_caroli
ENSMUSG00000047603	Zfp235	100	95.726	MGP_PahariEiJ_G0021173	Zfp235	100	95.726	Mus_pahari
ENSMUSG00000047603	Zfp235	89	73.525	MGP_PahariEiJ_G0021178	Zfp93	99	77.009	Mus_pahari
ENSMUSG00000047603	Zfp235	100	72.889	MGP_PahariEiJ_G0021177	Zfp108	99	73.810	Mus_pahari
ENSMUSG00000047603	Zfp235	100	98.718	MGP_SPRETEiJ_G0030416	Zfp235	100	98.718	Mus_spretus
ENSMUSG00000047603	Zfp235	99	68.669	MGP_SPRETEiJ_G0030417	Zfp114	99	68.669	Mus_spretus
ENSMUSG00000047603	Zfp235	100	63.704	MGP_SPRETEiJ_G0030420	Zfp108	99	75.708	Mus_spretus
ENSMUSG00000047603	Zfp235	68	76.286	MGP_SPRETEiJ_G0030421	-	99	77.629	Mus_spretus
ENSMUSG00000047603	Zfp235	61	54.422	ENSORLG00000027054	-	51	54.422	Oryzias_latipes
ENSMUSG00000047603	Zfp235	68	54.286	ENSORLG00015017539	-	89	54.286	Oryzias_latipes_hsok
ENSMUSG00000047603	Zfp235	99	52.311	ENSOGAG00000001912	ZNF233	100	51.392	Otolemur_garnettii
ENSMUSG00000047603	Zfp235	100	51.054	ENSPPAG00000030145	ZNF233	99	44.643	Pan_paniscus
ENSMUSG00000047603	Zfp235	100	51.288	ENSPTRG00000011111	ZNF233	99	44.918	Pan_troglodytes
ENSMUSG00000047603	Zfp235	100	51.288	ENSPANG00000010670	ZNF233	99	66.154	Papio_anubis
ENSMUSG00000047603	Zfp235	99	82.788	ENSPEMG00000018022	-	99	82.788	Peromyscus_maniculatus_bairdii
ENSMUSG00000047603	Zfp235	100	51.756	ENSPPYG00000010085	ZNF233	98	51.756	Pongo_abelii
ENSMUSG00000047603	Zfp235	99	52.885	ENSPCOG00000015292	ZNF233	99	56.291	Propithecus_coquereli
ENSMUSG00000047603	Zfp235	93	58.209	ENSPVAG00000004388	ZNF233	85	51.562	Pteropus_vampyrus
ENSMUSG00000047603	Zfp235	100	51.288	ENSRBIG00000035218	ZNF233	99	44.809	Rhinopithecus_bieti
ENSMUSG00000047603	Zfp235	100	51.288	ENSRROG00000030619	ZNF233	99	60.517	Rhinopithecus_roxellana
ENSMUSG00000047603	Zfp235	100	51.395	ENSTTRG00000011818	ZNF233	99	51.395	Tursiops_truncatus
ENSMUSG00000047603	Zfp235	93	53.286	ENSUMAG00000023065	ZNF233	96	49.883	Ursus_maritimus
ENSMUSG00000047603	Zfp235	100	50.490	ENSVPAG00000007465	ZNF233	99	40.960	Vicugna_pacos
ENSMUSG00000047603	Zfp235	61	52.198	ENSXMAG00000027300	-	64	52.198	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003700	DNA-binding transcription factor activity	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component