EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000047686 (Gene tree)
Gene ID: 213436
Gene Symbol: Rtl3
Alias: D430021I08Rik|Mar3|Mart3|ZHC5|Zcchc5
Full Name: retrotransposon Gag like 3
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 3563 bases
Position: chrX:106837082-106840644
Accession: 2685221
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000060157	zf-CCHC	PF00098.23	0.00062	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000062010	-	2948	-	ENSMUSP00000060157	553 (aa)	-	Q6P1Y1

Gene Model

Click here to download ENSMUSG00000047686's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000047686's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000047686	Rtl3	99	46.881	ENSG00000179300	RTL3	99	51.515	Homo_sapiens
ENSMUSG00000047686	Rtl3	100	57.512	ENSTSYG00000008776	RTL3	100	57.512	Carlito_syrichta
ENSMUSG00000047686	Rtl3	100	76.882	ENSCGRG00001015952	Rtl3	100	76.882	Cricetulus_griseus_chok1gshd
ENSMUSG00000047686	Rtl3	100	58.007	ENSDORG00000029995	Rtl3	100	57.473	Dipodomys_ordii
ENSMUSG00000047686	Rtl3	100	53.004	ENSECAG00000029496	RTL3	100	52.827	Equus_caballus
ENSMUSG00000047686	Rtl3	100	55.923	ENSSTOG00000027152	RTL3	100	55.923	Ictidomys_tridecemlineatus
ENSMUSG00000047686	Rtl3	100	54.336	ENSJJAG00000014790	-	100	53.628	Jaculus_jaculus
ENSMUSG00000047686	Rtl3	100	74.731	ENSMAUG00000011823	Rtl3	100	74.731	Mesocricetus_auratus
ENSMUSG00000047686	Rtl3	100	54.562	ENSMICG00000004901	RTL3	100	55.160	Microcebus_murinus
ENSMUSG00000047686	Rtl3	100	74.153	ENSMOCG00000017247	Rtl3	100	74.153	Microtus_ochrogaster
ENSMUSG00000047686	Rtl3	100	96.022	MGP_CAROLIEiJ_G0033333	Rtl3	100	96.022	Mus_caroli
ENSMUSG00000047686	Rtl3	100	93.490	MGP_PahariEiJ_G0031869	Rtl3	100	93.490	Mus_pahari
ENSMUSG00000047686	Rtl3	100	99.458	MGP_SPRETEiJ_G0034497	Rtl3	100	99.458	Mus_spretus
ENSMUSG00000047686	Rtl3	100	64.076	ENSNGAG00000002851	Rtl3	100	63.558	Nannospalax_galili
ENSMUSG00000047686	Rtl3	100	57.458	ENSOCUG00000025689	RTL3	100	57.288	Oryctolagus_cuniculus
ENSMUSG00000047686	Rtl3	100	55.714	ENSPCOG00000016711	RTL3	100	57.371	Propithecus_coquereli
ENSMUSG00000047686	Rtl3	100	88.309	ENSRNOG00000002429	Rtl3	100	88.309	Rattus_norvegicus
ENSMUSG00000047686	Rtl3	75	54.965	ENSTBEG00000002464	RTL3	88	54.734	Tupaia_belangeri

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	-	IEA	Component
GO:0008150	biological_process	-	ND	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function