EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000051870	-	4013	-	ENSMUSP00000057270	802 (aa)	-	Q8K327
ENSMUST00000128557	-	3977	XM_006508679	ENSMUSP00000120117	802 (aa)	XP_006508742	Q8K327

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000047710	Champ1	100	74.632	ENSG00000198824	CHAMP1	100	75.123	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000775	chromosome, centromeric region	-	IEA	Component
GO:0000776	kinetochore	-	IEA	Component
GO:0000777	condensed chromosome kinetochore	21873635.	IBA	Component
GO:0000777	condensed chromosome kinetochore	-	ISO	Component
GO:0000793	condensed chromosome	-	ISO	Component
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	21873635.	IBA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005694	chromosome	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005819	spindle	21873635.	IBA	Component
GO:0005819	spindle	-	ISO	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0031134	sister chromatid biorientation	21873635.	IBA	Process
GO:0031134	sister chromatid biorientation	-	ISO	Process
GO:0034501	protein localization to kinetochore	21873635.	IBA	Process
GO:0034501	protein localization to kinetochore	-	ISO	Process
GO:0035372	protein localization to microtubule	21873635.	IBA	Process
GO:0035372	protein localization to microtubule	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0051315	attachment of mitotic spindle microtubules to kinetochore	21873635.	IBA	Process
GO:0051315	attachment of mitotic spindle microtubules to kinetochore	-	ISO	Process
GO:0090543	Flemming body	-	ISO	Component