EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000047907 (Gene tree)
Gene ID: 228911
Gene Symbol: Tshz2
Alias: 2900073F20Rik|Mtsh2|Sdccag33l|Tsh2|Zfp218|teashirt2
Full Name: teashirt zinc finger family member 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 438804 bases
Position: chr2:169633013-170071816
Accession: 2153084
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000118550	zf-met	PF12874.7	0.00051	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000185239	-	3116	-	ENSMUSP00000140884	522 (aa)	-	A0A087WS38
ENSMUST00000109157	-	5083	-	ENSMUSP00000104785	1030 (aa)	-	Q68FE9
ENSMUST00000123300	-	3243	-	ENSMUSP00000118550	561 (aa)	-	A0A0A0MQI3
ENSMUST00000109159	-	4314	XM_011239515	ENSMUSP00000104787	1030 (aa)	XP_011237817	Q68FE9
ENSMUST00000140699	-	1111	-	ENSMUSP00000120013	208 (aa)	-	Q8K350

Gene Model

Click here to download ENSMUSG00000047907's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000047907's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000047907	Tshz2	100	57.290	ENSAPOG00000002486	tshz2	55	56.947	Acanthochromis_polyacanthus
ENSMUSG00000047907	Tshz2	100	57.118	ENSACIG00000017256	tshz2	55	56.633	Amphilophus_citrinellus
ENSMUSG00000047907	Tshz2	100	57.290	ENSAOCG00000023687	tshz2	55	56.947	Amphiprion_ocellaris
ENSMUSG00000047907	Tshz2	100	57.290	ENSAPEG00000000720	tshz2	55	56.947	Amphiprion_percula
ENSMUSG00000047907	Tshz2	100	57.363	ENSATEG00000024474	tshz2	55	56.803	Anabas_testudineus
ENSMUSG00000047907	Tshz2	100	56.752	ENSACLG00000017920	tshz2	55	56.633	Astatotilapia_calliptera
ENSMUSG00000047907	Tshz2	61	69.452	ENSAMXG00000001175	tshz2	54	57.513	Astyanax_mexicanus
ENSMUSG00000047907	Tshz2	100	56.923	ENSCVAG00000010918	tshz2	55	56.610	Cyprinodon_variegatus
ENSMUSG00000047907	Tshz2	100	56.873	ENSFHEG00000014202	tshz2	55	56.559	Fundulus_heteroclitus
ENSMUSG00000047907	Tshz2	100	56.752	ENSHBUG00000007293	tshz2	55	56.633	Haplochromis_burtoni
ENSMUSG00000047907	Tshz2	100	57.216	ENSMAMG00000005195	tshz2	55	56.027	Mastacembelus_armatus
ENSMUSG00000047907	Tshz2	60	49.422	ENSMAMG00000009602	tshz3b	100	49.422	Mastacembelus_armatus
ENSMUSG00000047907	Tshz2	100	56.752	ENSMZEG00005023416	tshz2	55	56.633	Maylandia_zebra
ENSMUSG00000047907	Tshz2	100	56.799	ENSMMOG00000014934	tshz2	55	56.314	Mola_mola
ENSMUSG00000047907	Tshz2	100	56.873	ENSMALG00000018673	tshz2	56	56.729	Monopterus_albus
ENSMUSG00000047907	Tshz2	100	99.822	MGP_SPRETEiJ_G0025645	Tshz2	100	99.822	Mus_spretus
ENSMUSG00000047907	Tshz2	100	56.581	ENSNBRG00000001911	tshz2	55	56.463	Neolamprologus_brichardi
ENSMUSG00000047907	Tshz2	100	56.410	ENSONIG00000016558	tshz2	55	55.932	Oreochromis_niloticus
ENSMUSG00000047907	Tshz2	100	57.192	ENSORLG00000016111	tshz2	55	56.701	Oryzias_latipes
ENSMUSG00000047907	Tshz2	100	57.217	ENSORLG00020007414	tshz2	55	56.529	Oryzias_latipes_hni
ENSMUSG00000047907	Tshz2	100	57.414	ENSOMEG00000017379	tshz2	55	56.897	Oryzias_melastigma
ENSMUSG00000047907	Tshz2	99	57.193	ENSPMGG00000019609	tshz2	54	57.394	Periophthalmus_magnuspinnatus
ENSMUSG00000047907	Tshz2	100	56.529	ENSPFOG00000020779	tshz2	63	55.822	Poecilia_formosa
ENSMUSG00000047907	Tshz2	100	56.529	ENSPLAG00000012397	tshz2	56	55.822	Poecilia_latipinna
ENSMUSG00000047907	Tshz2	100	56.529	ENSPMEG00000008480	tshz2	55	55.822	Poecilia_mexicana
ENSMUSG00000047907	Tshz2	100	56.752	ENSPNYG00000021698	tshz2	55	56.633	Pundamilia_nyererei
ENSMUSG00000047907	Tshz2	99	54.983	ENSPNAG00000020910	tshz2	54	57.570	Pygocentrus_nattereri
ENSMUSG00000047907	Tshz2	100	56.775	ENSSDUG00000004636	tshz2	55	56.463	Seriola_dumerili
ENSMUSG00000047907	Tshz2	100	56.604	ENSSLDG00000005026	tshz2	55	56.293	Seriola_lalandi_dorsalis
ENSMUSG00000047907	Tshz2	100	57.461	ENSSPAG00000001957	tshz2	56	57.118	Stegastes_partitus
ENSMUSG00000047907	Tshz2	100	55.422	ENSTRUG00000007670	tshz2	55	55.613	Takifugu_rubripes
ENSMUSG00000047907	Tshz2	100	56.357	ENSXCOG00000015459	tshz2	55	55.651	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003682	chromatin binding	21873635.	IBA	Function
GO:0005515	protein binding	19343227.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006357	regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0007275	multicellular organism development	-	IEA	Process
GO:0010468	regulation of gene expression	20615956.	IMP	Process
GO:0046872	metal ion binding	-	IEA	Function