EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000048000 (Gene tree)
Gene ID: 227331
Gene Symbol: Gigyf2
Alias: 2610016F01Rik|A830080H02Rik|Tnrc15
Full Name: GRB10 interacting GYF protein 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 123799
Position: chr1: 87326998-87450796
Accession: 2138584
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000174482	-	778	-	-	- (aa)	-	-
ENSMUST00000174846	-	995	-	-	- (aa)	-	-
ENSMUST00000027475	-	5724	XM_006529464	ENSMUSP00000027475	1291 (aa)	XP_006529527	Q6Y7W8
ENSMUST00000172794	-	4029	XM_006529467	ENSMUSP00000134077	1285 (aa)	XP_006529530	G3UYG6
ENSMUST00000173152	-	618	-	ENSMUSP00000134086	172 (aa)	-	G3UYH4
ENSMUST00000174501	-	3876	XM_006529470	ENSMUSP00000133327	1291 (aa)	XP_006529533	Q6Y7W8
ENSMUST00000173663	-	386	-	ENSMUSP00000133416	110 (aa)	-	G3UWT6
ENSMUST00000174334	-	533	-	ENSMUSP00000133666	84 (aa)	-	G3UXF2
ENSMUST00000187038	-	1962	-	-	- (aa)	-	-
ENSMUST00000174583	-	3015	-	-	- (aa)	-	-
ENSMUST00000174605	-	674	-	-	- (aa)	-	-
ENSMUST00000172976	-	545	-	-	- (aa)	-	-
ENSMUST00000173850	-	2520	-	-	- (aa)	-	-
ENSMUST00000174671	-	3074	-	-	- (aa)	-	-
ENSMUST00000173235	-	2826	-	ENSMUSP00000134677	787 (aa)	-	G3UZX7
ENSMUST00000173173	-	2765	-	ENSMUSP00000134193	877 (aa)	-	G3UYR9
ENSMUST00000164992	-	2330	-	ENSMUSP00000129046	721 (aa)	-	E9Q2M5
ENSMUST00000173636	-	773	-	ENSMUSP00000134660	258 (aa)	-	G3UZW5
ENSMUST00000174535	-	586	-	-	- (aa)	-	-
ENSMUST00000173148	-	566	-	ENSMUSP00000134553	42 (aa)	-	G3UZM3
ENSMUST00000172776	-	558	-	-	- (aa)	-	-
ENSMUST00000172736	-	666	-	ENSMUSP00000134620	222 (aa)	-	G3UZS9
ENSMUST00000172964	-	3721	-	ENSMUSP00000133392	1122 (aa)	-	G3UWR2

Gene Model

Click here to download ENSMUSG00000048000's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000048000's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000048000	Gigyf2	100	96.429	ENSG00000204120	GIGYF2	100	100.000	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005515	protein binding	12771153.	IPI	Function
GO:0005737	cytoplasm	20670374.	IDA	Component
GO:0005768	endosome	-	ISO	Component
GO:0005783	endoplasmic reticulum	-	ISO	Component
GO:0005794	Golgi apparatus	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0007631	feeding behavior	19744960.	IMP	Process
GO:0008344	adult locomotory behavior	19744960.	IMP	Process
GO:0009791	post-embryonic development	19744960.	IMP	Process
GO:0010494	cytoplasmic stress granule	-	ISO	Component
GO:0016021	integral component of membrane	20670374.	IDA	Component
GO:0016441	posttranscriptional gene silencing	-	ISO	Process
GO:0017148	negative regulation of translation	-	ISO	Process
GO:0021522	spinal cord motor neuron differentiation	19744960.	IMP	Process
GO:0031571	mitotic G1 DNA damage checkpoint	19744960.	IMP	Process
GO:0031982	vesicle	20670374.	IDA	Component
GO:0032991	protein-containing complex	-	ISO	Component
GO:0035264	multicellular organism growth	19744960.	IMP	Process
GO:0043204	perikaryon	20670374.	IDA	Component
GO:0043204	perikaryon	-	ISO	Component
GO:0044267	cellular protein metabolic process	19744960.	IMP	Process
GO:0048009	insulin-like growth factor receptor signaling pathway	19744960.	IMP	Process
GO:0048009	insulin-like growth factor receptor signaling pathway	-	ISO	Process
GO:0048873	homeostasis of number of cells within a tissue	19744960.	IMP	Process
GO:0050881	musculoskeletal movement	19744960.	IMP	Process
GO:0050885	neuromuscular process controlling balance	19744960.	IMP	Process
GO:0061157	mRNA destabilization	-	ISO	Process
GO:0070064	proline-rich region binding	-	ISO	Function
GO:1990635	proximal dendrite	20670374.	IDA	Component
GO:1990635	proximal dendrite	-	ISO	Component