EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000048109 (Gene tree)
Gene ID
229700
Gene Symbol
Rbm15
Alias
C230088J01Rik
Full Name
RNA binding motif protein 15
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Minus strand
Length
8253 bases
Position
chr3:107325421-107333673
Accession
2443205
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000054424RRM_1PF00076.221.1e-2412
ENSMUSP00000054424RRM_1PF00076.221.1e-2422
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
25993413Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle ProgressionIC & MEF2015Boucas JDOI: 10.1371/journal.pone.0125745
27768875High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem CellsnIC & mESC2016.09He CDOI: 10.1016/j.molcel.2016.09.034
27281784Identification of RNA binding Proteins in Macrophages by Interactome CaptureIC & RAW264.72016 Jun 8Liepelt ADOI: 10.1074/mcp.M115.056564
23912277The RNA binding protein repertoire of embryonic stem cellsIC & mESC2013 Aug 4Kwon SCDOI: 10.1038/nsmb.2638
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseIC & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000061772-4343-ENSMUSP00000054424962 (aa)-Q0VBL3
ENSMUST00000197769-5967--- (aa)--
Gene Model
Click here to download ENSMUSG00000048109's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000048109's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000048109Rbm158246.359ENSMUSG00000074102Rbm15b8547.181
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000048109Rbm159994.770ENSG00000162775RBM159994.792Homo_sapiens
ENSMUSG00000048109Rbm159256.823ENSAPOG00000017590-10056.040Acanthochromis_polyacanthus
ENSMUSG00000048109Rbm159561.530ENSAPOG00000018748rbm159960.600Acanthochromis_polyacanthus
ENSMUSG00000048109Rbm159994.984ENSAMEG00000011540RBM159994.984Ailuropoda_melanoleuca
ENSMUSG00000048109Rbm159557.158ENSACIG00000019811-8661.174Amphilophus_citrinellus
ENSMUSG00000048109Rbm159561.218ENSACIG00000004343rbm159960.470Amphilophus_citrinellus
ENSMUSG00000048109Rbm159561.105ENSAOCG00000016849rbm159960.814Amphiprion_ocellaris
ENSMUSG00000048109Rbm159558.587ENSAOCG00000021969-9957.684Amphiprion_ocellaris
ENSMUSG00000048109Rbm159561.318ENSAPEG00000020077rbm159960.814Amphiprion_percula
ENSMUSG00000048109Rbm159558.684ENSAPEG00000015151-9857.787Amphiprion_percula
ENSMUSG00000048109Rbm159560.687ENSATEG00000019337rbm159960.606Anabas_testudineus
ENSMUSG00000048109Rbm159557.097ENSATEG00000005926-8660.821Anabas_testudineus
ENSMUSG00000048109Rbm159994.797ENSANAG00000020673RBM159994.896Aotus_nancymaae
ENSMUSG00000048109Rbm159561.263ENSACLG00000001673rbm159960.768Astatotilapia_calliptera
ENSMUSG00000048109Rbm159557.447ENSACLG00000022961-9756.337Astatotilapia_calliptera
ENSMUSG00000048109Rbm159562.959ENSAMXG00000026103rbm159962.554Astyanax_mexicanus
ENSMUSG00000048109Rbm1510093.672ENSBTAG00000012555RBM1510093.672Bos_taurus
ENSMUSG00000048109Rbm159994.792ENSCJAG00000003411RBM159994.792Callithrix_jacchus
ENSMUSG00000048109Rbm1510094.393ENSCAFG00000019789RBM159994.496Canis_familiaris
ENSMUSG00000048109Rbm1510094.393ENSCAFG00020009671RBM159994.496Canis_lupus_dingo
ENSMUSG00000048109Rbm1510093.880ENSCHIG00000026774RBM1510093.880Capra_hircus
ENSMUSG00000048109Rbm159993.613ENSTSYG00000000106RBM159893.515Carlito_syrichta
ENSMUSG00000048109Rbm156794.531ENSCAPG00000013057RBM159993.912Cavia_aperea
ENSMUSG00000048109Rbm1510093.880ENSCPOG00000007520RBM1510093.983Cavia_porcellus
ENSMUSG00000048109Rbm159994.688ENSCCAG00000036780RBM159994.688Cebus_capucinus
ENSMUSG00000048109Rbm159994.589ENSCATG00000015743RBM159994.688Cercocebus_atys
ENSMUSG00000048109Rbm1510095.016ENSCLAG00000008406RBM1510095.119Chinchilla_lanigera
ENSMUSG00000048109Rbm159994.462ENSCSAG00000001563RBM159894.462Chlorocebus_sabaeus
ENSMUSG00000048109Rbm159569.421ENSCPBG00000001662RBM159971.061Chrysemys_picta_bellii
ENSMUSG00000048109Rbm159994.462ENSCANG00000038717RBM159794.462Colobus_angolensis_palliatus
ENSMUSG00000048109Rbm1510098.649ENSCGRG00001001004Rbm1510098.649Cricetulus_griseus_chok1gshd
ENSMUSG00000048109Rbm1510098.649ENSCGRG00000010592Rbm1510098.649Cricetulus_griseus_crigri
ENSMUSG00000048109Rbm159560.365ENSCSEG00000004062rbm159959.740Cynoglossus_semilaevis
ENSMUSG00000048109Rbm159551.053ENSCSEG00000002314-8653.129Cynoglossus_semilaevis
ENSMUSG00000048109Rbm159561.629ENSCVAG00000013185rbm159960.343Cyprinodon_variegatus
ENSMUSG00000048109Rbm159553.017ENSCVAG00000004005-9951.489Cyprinodon_variegatus
ENSMUSG00000048109Rbm159562.662ENSDARG00000073847rbm159961.580Danio_rerio
ENSMUSG00000048109Rbm157293.804ENSDNOG00000032007RBM159793.804Dasypus_novemcinctus
ENSMUSG00000048109Rbm159594.524ENSDORG00000005669Rbm159994.967Dipodomys_ordii
ENSMUSG00000048109Rbm1510095.124ENSEASG00005005359RBM1510095.124Equus_asinus_asinus
ENSMUSG00000048109Rbm1510095.124ENSECAG00000023660RBM1510095.124Equus_caballus
ENSMUSG00000048109Rbm159559.743ENSELUG00000016087rbm159759.057Esox_lucius
ENSMUSG00000048109Rbm159558.134ENSELUG00000014614RBM158662.594Esox_lucius
ENSMUSG00000048109Rbm1510095.016ENSFCAG00000028208RBM159995.016Felis_catus
ENSMUSG00000048109Rbm156275.987ENSFALG00000003062RBM1510079.825Ficedula_albicollis
ENSMUSG00000048109Rbm1510094.606ENSFDAG00000020743RBM1510094.606Fukomys_damarensis
ENSMUSG00000048109Rbm159553.441ENSFHEG00000005559-9951.551Fundulus_heteroclitus
ENSMUSG00000048109Rbm159560.710ENSFHEG00000005024rbm159959.849Fundulus_heteroclitus
ENSMUSG00000048109Rbm155765.419ENSGMOG00000019941rbm159964.057Gadus_morhua
ENSMUSG00000048109Rbm159567.216ENSGALG00000000401RBM159969.825Gallus_gallus
ENSMUSG00000048109Rbm159560.757ENSGAFG00000001534rbm159859.848Gambusia_affinis
ENSMUSG00000048109Rbm159553.772ENSGAFG00000021611-9551.987Gambusia_affinis
ENSMUSG00000048109Rbm159554.274ENSGACG00000001022-10052.739Gasterosteus_aculeatus
ENSMUSG00000048109Rbm159560.897ENSGACG00000007932rbm159959.936Gasterosteus_aculeatus
ENSMUSG00000048109Rbm159568.873ENSGAGG00000012252RBM159971.370Gopherus_agassizii
ENSMUSG00000048109Rbm159994.770ENSGGOG00000003655RBM159894.671Gorilla_gorilla
ENSMUSG00000048109Rbm159558.002ENSHBUG00000003220-8660.848Haplochromis_burtoni
ENSMUSG00000048109Rbm159561.368ENSHBUG00000022227rbm159960.874Haplochromis_burtoni
ENSMUSG00000048109Rbm1510094.917ENSHGLG00000014811RBM1510094.917Heterocephalus_glaber_female
ENSMUSG00000048109Rbm1510094.917ENSHGLG00100017137RBM1510094.917Heterocephalus_glaber_male
ENSMUSG00000048109Rbm159550.271ENSHCOG00000005229RBM158753.317Hippocampus_comes
ENSMUSG00000048109Rbm159560.493ENSHCOG00000004048rbm159959.914Hippocampus_comes
ENSMUSG00000048109Rbm159561.448ENSIPUG00000004415RBM159961.838Ictalurus_punctatus
ENSMUSG00000048109Rbm1510095.223ENSSTOG00000026597RBM1510095.223Ictidomys_tridecemlineatus
ENSMUSG00000048109Rbm1510094.835ENSJJAG00000021795Rbm1510094.731Jaculus_jaculus
ENSMUSG00000048109Rbm159561.087ENSKMAG00000017681rbm159960.256Kryptolebias_marmoratus
ENSMUSG00000048109Rbm159552.909ENSKMAG00000021291-9952.438Kryptolebias_marmoratus
ENSMUSG00000048109Rbm159253.966ENSLBEG00000013105-8658.094Labrus_bergylta
ENSMUSG00000048109Rbm159560.722ENSLBEG00000008274rbm159960.150Labrus_bergylta
ENSMUSG00000048109Rbm159564.957ENSLACG00000018372RBM159964.263Latimeria_chalumnae
ENSMUSG00000048109Rbm159563.862ENSLOCG00000017940rbm159963.415Lepisosteus_oculatus
ENSMUSG00000048109Rbm1510093.043ENSLAFG00000012897RBM1510093.250Loxodonta_africana
ENSMUSG00000048109Rbm159994.792ENSMFAG00000029929RBM159994.792Macaca_fascicularis
ENSMUSG00000048109Rbm159994.792ENSMMUG00000015020RBM159994.792Macaca_mulatta
ENSMUSG00000048109Rbm159994.792ENSMNEG00000045235RBM159994.792Macaca_nemestrina
ENSMUSG00000048109Rbm159994.566ENSMLEG00000035727RBM159894.566Mandrillus_leucophaeus
ENSMUSG00000048109Rbm159561.318ENSMAMG00000010732rbm159960.191Mastacembelus_armatus
ENSMUSG00000048109Rbm159255.506ENSMAMG00000023921-8758.732Mastacembelus_armatus
ENSMUSG00000048109Rbm159561.263ENSMZEG00005006595rbm159960.768Maylandia_zebra
ENSMUSG00000048109Rbm159556.915ENSMZEG00005010876-8560.000Maylandia_zebra
ENSMUSG00000048109Rbm1510098.649ENSMAUG00000007198Rbm1510098.649Mesocricetus_auratus
ENSMUSG00000048109Rbm1510094.704ENSMICG00000005255RBM1510094.600Microcebus_murinus
ENSMUSG00000048109Rbm1510098.441ENSMOCG00000013142Rbm1510098.441Microtus_ochrogaster
ENSMUSG00000048109Rbm159551.346ENSMMOG00000021778-9950.698Mola_mola
ENSMUSG00000048109Rbm159560.535ENSMMOG00000002357rbm158663.930Mola_mola
ENSMUSG00000048109Rbm159554.320ENSMALG00000017867-8657.268Monopterus_albus
ENSMUSG00000048109Rbm159560.897ENSMALG00000019648rbm159959.872Monopterus_albus
ENSMUSG00000048109Rbm1510099.792MGP_CAROLIEiJ_G0025501Rbm1510099.792Mus_caroli
ENSMUSG00000048109Rbm1510099.792MGP_PahariEiJ_G0026947Rbm1510099.792Mus_pahari
ENSMUSG00000048109Rbm15100100.000MGP_SPRETEiJ_G0026451Rbm15100100.000Mus_spretus
ENSMUSG00000048109Rbm1510094.808ENSMPUG00000003822RBM159994.808Mustela_putorius_furo
ENSMUSG00000048109Rbm159992.300ENSMLUG00000007169RBM159992.292Myotis_lucifugus
ENSMUSG00000048109Rbm1510095.332ENSNGAG00000011394Rbm1510095.332Nannospalax_galili
ENSMUSG00000048109Rbm159561.263ENSNBRG00000008870rbm159960.768Neolamprologus_brichardi
ENSMUSG00000048109Rbm159557.771ENSNBRG00000005460-8660.572Neolamprologus_brichardi
ENSMUSG00000048109Rbm159561.263ENSNBRG00000003947rbm159960.768Neolamprologus_brichardi
ENSMUSG00000048109Rbm159994.979ENSNLEG00000003601RBM159894.880Nomascus_leucogenys
ENSMUSG00000048109Rbm1510083.817ENSMEUG00000015940RBM159884.440Notamacropus_eugenii
ENSMUSG00000048109Rbm159594.189ENSODEG00000019343RBM159993.428Octodon_degus
ENSMUSG00000048109Rbm159256.478ENSONIG00000018955-8659.561Oreochromis_niloticus
ENSMUSG00000048109Rbm159561.940ENSONIG00000002532rbm159961.447Oreochromis_niloticus
ENSMUSG00000048109Rbm159994.462ENSOCUG00000002434RBM159994.462Oryctolagus_cuniculus
ENSMUSG00000048109Rbm159554.635ENSORLG00000000433-9953.112Oryzias_latipes
ENSMUSG00000048109Rbm159561.547ENSORLG00000006197rbm159960.795Oryzias_latipes
ENSMUSG00000048109Rbm159561.547ENSORLG00020011223rbm159960.687Oryzias_latipes_hni
ENSMUSG00000048109Rbm159554.308ENSORLG00020008048-9952.916Oryzias_latipes_hni
ENSMUSG00000048109Rbm159561.547ENSORLG00015003078rbm159960.795Oryzias_latipes_hsok
ENSMUSG00000048109Rbm159554.221ENSORLG00015004063-9952.929Oryzias_latipes_hsok
ENSMUSG00000048109Rbm159561.473ENSOMEG00000020683rbm159960.470Oryzias_melastigma
ENSMUSG00000048109Rbm159551.915ENSOMEG00000014662-8754.815Oryzias_melastigma
ENSMUSG00000048109Rbm159594.858ENSOGAG00000009182RBM159994.754Otolemur_garnettii
ENSMUSG00000048109Rbm159992.797ENSOARG00000019430RBM159892.797Ovis_aries
ENSMUSG00000048109Rbm159994.770ENSPPAG00000041967RBM159894.671Pan_paniscus
ENSMUSG00000048109Rbm1510095.016ENSPPRG00000013347RBM159995.016Panthera_pardus
ENSMUSG00000048109Rbm1510091.485ENSPTIG00000010318RBM159991.070Panthera_tigris_altaica
ENSMUSG00000048109Rbm159994.770ENSPTRG00000001074RBM159994.792Pan_troglodytes
ENSMUSG00000048109Rbm159994.589ENSPANG00000020891RBM159994.688Papio_anubis
ENSMUSG00000048109Rbm158159.383ENSPKIG00000013584rbm159257.299Paramormyrops_kingsleyae
ENSMUSG00000048109Rbm159560.884ENSPKIG00000003067-9959.870Paramormyrops_kingsleyae
ENSMUSG00000048109Rbm155573.599ENSPSIG00000001607RBM159974.281Pelodiscus_sinensis
ENSMUSG00000048109Rbm159554.526ENSPMGG00000017642-9953.879Periophthalmus_magnuspinnatus
ENSMUSG00000048109Rbm159559.419ENSPMGG00000016039rbm158561.761Periophthalmus_magnuspinnatus
ENSMUSG00000048109Rbm1510098.441ENSPEMG00000000014Rbm1510098.441Peromyscus_maniculatus_bairdii
ENSMUSG00000048109Rbm159984.896ENSPCIG00000003458RBM159985.312Phascolarctos_cinereus
ENSMUSG00000048109Rbm159759.039ENSPFOG00000012754rbm159957.906Poecilia_formosa
ENSMUSG00000048109Rbm159560.963ENSPLAG00000003560rbm159960.171Poecilia_latipinna
ENSMUSG00000048109Rbm159555.519ENSPLAG00000015343-9953.441Poecilia_latipinna
ENSMUSG00000048109Rbm159555.784ENSPMEG00000001923-9953.656Poecilia_mexicana
ENSMUSG00000048109Rbm159560.856ENSPMEG00000002049rbm159960.064Poecilia_mexicana
ENSMUSG00000048109Rbm159555.400ENSPREG00000004167-9953.598Poecilia_reticulata
ENSMUSG00000048109Rbm159560.600ENSPREG00000014581rbm159960.493Poecilia_reticulata
ENSMUSG00000048109Rbm159994.693ENSPPYG00000001051RBM159994.792Pongo_abelii
ENSMUSG00000048109Rbm156268.960ENSPPYG00000015734-10068.792Pongo_abelii
ENSMUSG00000048109Rbm157292.529ENSPCAG00000006329RBM157192.385Procavia_capensis
ENSMUSG00000048109Rbm159994.665ENSPCOG00000019767RBM159894.566Propithecus_coquereli
ENSMUSG00000048109Rbm1510094.398ENSPVAG00000007193RBM159894.398Pteropus_vampyrus
ENSMUSG00000048109Rbm159557.663ENSPNYG00000007434-8660.697Pundamilia_nyererei
ENSMUSG00000048109Rbm159560.651ENSPNYG00000005143rbm159960.448Pundamilia_nyererei
ENSMUSG00000048109Rbm159562.595ENSPNAG00000007496rbm159961.910Pygocentrus_nattereri
ENSMUSG00000048109Rbm1510098.960ENSRNOG00000047499Rbm1510098.960Rattus_norvegicus
ENSMUSG00000048109Rbm159994.589ENSRBIG00000044261RBM159994.688Rhinopithecus_bieti
ENSMUSG00000048109Rbm159994.589ENSRROG00000045519RBM159994.688Rhinopithecus_roxellana
ENSMUSG00000048109Rbm159994.479ENSSBOG00000021394RBM159994.479Saimiri_boliviensis_boliviensis
ENSMUSG00000048109Rbm159560.832ENSSMAG00000019106rbm159960.107Scophthalmus_maximus
ENSMUSG00000048109Rbm159556.237ENSSMAG00000000431-9956.405Scophthalmus_maximus
ENSMUSG00000048109Rbm159557.618ENSSDUG00000009424-9956.503Seriola_dumerili
ENSMUSG00000048109Rbm159561.082ENSSDUG00000008769rbm159960.577Seriola_dumerili
ENSMUSG00000048109Rbm159557.833ENSSLDG00000022441-9956.610Seriola_lalandi_dorsalis
ENSMUSG00000048109Rbm159561.082ENSSLDG00000002691rbm159960.577Seriola_lalandi_dorsalis
ENSMUSG00000048109Rbm158890.959ENSSARG00000000360RBM158790.659Sorex_araneus
ENSMUSG00000048109Rbm159561.188ENSSPAG00000004965rbm159960.684Stegastes_partitus
ENSMUSG00000048109Rbm159557.297ENSSPAG00000007739-9955.841Stegastes_partitus
ENSMUSG00000048109Rbm1510094.710ENSSSCG00000006809RBM1510094.710Sus_scrofa
ENSMUSG00000048109Rbm156170.511ENSTGUG00000000886RBM159971.005Taeniopygia_guttata
ENSMUSG00000048109Rbm159554.536ENSTRUG00000007851-9752.366Takifugu_rubripes
ENSMUSG00000048109Rbm159560.064ENSTRUG00000002921rbm159958.555Takifugu_rubripes
ENSMUSG00000048109Rbm159559.425ENSTNIG00000015129rbm159958.102Tetraodon_nigroviridis
ENSMUSG00000048109Rbm159994.179ENSTBEG00000008339RBM159894.179Tupaia_belangeri
ENSMUSG00000048109Rbm159994.468ENSTTRG00000001317RBM159894.468Tursiops_truncatus
ENSMUSG00000048109Rbm159995.188ENSUAMG00000017330RBM159995.089Ursus_americanus
ENSMUSG00000048109Rbm1510095.119ENSUMAG00000013623RBM159995.119Ursus_maritimus
ENSMUSG00000048109Rbm1510094.600ENSVVUG00000002929RBM159994.704Vulpes_vulpes
ENSMUSG00000048109Rbm159561.287ENSXETG00000002029rbm159959.542Xenopus_tropicalis
ENSMUSG00000048109Rbm159555.113ENSXCOG00000003003-9953.383Xiphophorus_couchianus
ENSMUSG00000048109Rbm159561.070ENSXCOG00000006328rbm159960.171Xiphophorus_couchianus
ENSMUSG00000048109Rbm159561.070ENSXMAG00000020192rbm159960.171Xiphophorus_maculatus
ENSMUSG00000048109Rbm159555.005ENSXMAG00000009062-9953.276Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000122negative regulation of transcription by RNA polymerase II17283045.IDAProcess
GO:0000381regulation of alternative mRNA splicing, via spliceosome25468569.IDAProcess
GO:0000381regulation of alternative mRNA splicing, via spliceosome-ISOProcess
GO:0001510RNA methylation-ISOProcess
GO:0001569branching involved in blood vessel morphogenesis18981216.IMPProcess
GO:0003676nucleic acid binding-IEAFunction
GO:0003723RNA binding25468569.IDAFunction
GO:0003723RNA binding-ISOFunction
GO:0003729mRNA binding-ISOFunction
GO:0005515protein binding17283045.IPIFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005634nucleus17283045.IDAComponent
GO:0005654nucleoplasm-ISOComponent
GO:0007221positive regulation of transcription of Notch receptor target17283045.IDAProcess
GO:0009048dosage compensation by inactivation of X chromosome-ISOProcess
GO:0016020membrane-IEAComponent
GO:0016607nuclear speck-ISOComponent
GO:0036396RNA N6-methyladenosine methyltransferase complex-ISOComponent
GO:0038163thrombopoietin-mediated signaling pathway25468569.IDAProcess
GO:0045638negative regulation of myeloid cell differentiation17283045.IDAProcess
GO:0045638negative regulation of myeloid cell differentiation17283045.IMPProcess
GO:0045652regulation of megakaryocyte differentiation-ISOProcess
GO:0048536spleen development18981216.IMPProcess
GO:0060412ventricular septum morphogenesis18981216.IMPProcess
GO:0060674placenta blood vessel development18981216.IMPProcess

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