EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000048271 (Gene tree)
Gene ID: 381626
Gene Symbol: Rbm33
Alias: 3200001K10Rik|6430512A10Rik|Prr8
Full Name: RNA binding motif protein 33
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 102119 bases
Position: chr5:28317121-28419239
Accession: 1919670
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000122901	RRM_1	PF00076.22	0.00078	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000059644	-	9510	XM_006535733	ENSMUSP00000062449	1231 (aa)	XP_006535796	Q9CXK9
ENSMUST00000133313	-	547	-	ENSMUSP00000122901	65 (aa)	-	F6Y0Q7
ENSMUST00000030920	-	3955	-	ENSMUSP00000030920	320 (aa)	-	Q9CXK9
ENSMUST00000090355	-	1032	-	ENSMUSP00000091512	261 (aa)	-	D3YV48
ENSMUST00000144967	-	1211	-	ENSMUSP00000121879	383 (aa)	-	F6RNF9
ENSMUST00000114884	-	6256	XM_006535734	ENSMUSP00000110534	1191 (aa)	XP_006535797	D3Z5I9

Gene Model

Click here to download ENSMUSG00000048271's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000048271's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000048271	Rbm33	100	96.923	ENSG00000184863	RBM33	77	96.923	Homo_sapiens
ENSMUSG00000048271	Rbm33	100	60.000	ENSACIG00000018229	-	63	60.000	Amphilophus_citrinellus
ENSMUSG00000048271	Rbm33	100	95.385	ENSCAFG00020005221	-	61	95.385	Canis_lupus_dingo
ENSMUSG00000048271	Rbm33	100	100.000	ENSCAPG00000012829	-	98	100.000	Cavia_aperea
ENSMUSG00000048271	Rbm33	100	100.000	ENSCPOG00000011852	RBM33	98	100.000	Cavia_porcellus
ENSMUSG00000048271	Rbm33	100	100.000	ENSCLAG00000001190	RBM33	98	100.000	Chinchilla_lanigera
ENSMUSG00000048271	Rbm33	100	96.923	ENSCGRG00000011160	Rbm33	100	96.923	Cricetulus_griseus_crigri
ENSMUSG00000048271	Rbm33	100	53.846	ENSCSEG00000000974	-	55	53.846	Cynoglossus_semilaevis
ENSMUSG00000048271	Rbm33	100	96.923	ENSDORG00000027267	-	98	96.923	Dipodomys_ordii
ENSMUSG00000048271	Rbm33	100	100.000	ENSFDAG00000007349	RBM33	98	100.000	Fukomys_damarensis
ENSMUSG00000048271	Rbm33	100	100.000	ENSHGLG00000008580	RBM33	98	100.000	Heterocephalus_glaber_female
ENSMUSG00000048271	Rbm33	100	100.000	ENSHGLG00100006562	RBM33	98	100.000	Heterocephalus_glaber_male
ENSMUSG00000048271	Rbm33	100	98.462	ENSJJAG00000020415	-	98	98.462	Jaculus_jaculus
ENSMUSG00000048271	Rbm33	100	98.462	ENSMAUG00000017332	Rbm33	100	98.462	Mesocricetus_auratus
ENSMUSG00000048271	Rbm33	100	100.000	MGP_CAROLIEiJ_G0027039	Rbm33	100	100.000	Mus_caroli
ENSMUSG00000048271	Rbm33	100	100.000	MGP_PahariEiJ_G0021812	Rbm33	100	100.000	Mus_pahari
ENSMUSG00000048271	Rbm33	100	100.000	MGP_SPRETEiJ_G0028035	Rbm33	100	100.000	Mus_spretus
ENSMUSG00000048271	Rbm33	100	100.000	ENSNGAG00000015914	-	98	100.000	Nannospalax_galili
ENSMUSG00000048271	Rbm33	100	100.000	ENSODEG00000009918	-	98	100.000	Octodon_degus
ENSMUSG00000048271	Rbm33	100	93.846	ENSPPRG00000001410	-	61	93.846	Panthera_pardus
ENSMUSG00000048271	Rbm33	100	93.846	ENSPTIG00000013631	-	61	93.846	Panthera_tigris_altaica
ENSMUSG00000048271	Rbm33	94	62.295	ENSPMGG00000001873	-	59	62.295	Periophthalmus_magnuspinnatus
ENSMUSG00000048271	Rbm33	100	98.462	ENSPEMG00000017918	Rbm33	100	98.462	Peromyscus_maniculatus_bairdii
ENSMUSG00000048271	Rbm33	100	92.308	ENSSPUG00000002505	-	62	92.308	Sphenodon_punctatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0008150	biological_process	-	ND	Process