EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000048439 (Gene tree)
Gene ID: 231042
Gene Symbol: Nupl2
Alias: CG1
Full Name: nucleoporin like 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 19051
Position: chr5: 24164963-24184013
Accession: 2387631
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000124150	-	535	-	-	- (aa)	-	-
ENSMUST00000115101	-	1624	-	ENSMUSP00000110753	161 (aa)	-	A0A0R4J1K6
ENSMUST00000147392	-	644	-	-	- (aa)	-	-
ENSMUST00000049887	-	2914	-	ENSMUSP00000062766	420 (aa)	-	E9QL43

Gene Model

Click here to download ENSMUSG00000048439's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000048439's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000048439	Nupl2	93	84.106	ENSG00000136243	NUPL2	96	84.106	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001750	photoreceptor outer segment	22183407.	IDA	Component
GO:0005049	nuclear export signal receptor activity	21873635.	IBA	Function
GO:0005049	nuclear export signal receptor activity	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005635	nuclear envelope	21873635.	IBA	Component
GO:0005635	nuclear envelope	-	ISO	Component
GO:0005643	nuclear pore	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006611	protein export from nucleus	-	ISO	Process
GO:0015031	protein transport	-	IEA	Process
GO:0016020	membrane	-	IEA	Component
GO:0046872	metal ion binding	-	IEA	Function
GO:0051028	mRNA transport	-	IEA	Process