EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000048612 (Gene tree)
Gene ID: 226101
Gene Symbol: Myof
Alias: 2310051D19Rik|E030042N20Rik|Fer1l3
Full Name: myoferlin
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 144542
Position: chr19: 37899036-38043577
Accession: 1919192
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000224518	-	3030	-	-	- (aa)	-	-
ENSMUST00000223650	-	3066	-	-	- (aa)	-	-
ENSMUST00000224900	-	631	-	ENSMUSP00000153590	186 (aa)	-	A0A286YDV5
ENSMUST00000225159	-	4129	-	ENSMUSP00000153201	1307 (aa)	-	A0A286YCZ3
ENSMUST00000224560	-	863	-	ENSMUSP00000153534	85 (aa)	-	A0A286YE65
ENSMUST00000225435	-	567	-	-	- (aa)	-	-
ENSMUST00000172095	-	7094	-	ENSMUSP00000129792	2048 (aa)	-	E9Q390
ENSMUST00000041475	-	6902	XM_006526995	ENSMUSP00000045036	2048 (aa)	XP_006527058	Q69ZN7
ENSMUST00000226084	-	3926	-	-	- (aa)	-	-
ENSMUST00000224580	-	662	-	-	- (aa)	-	-
ENSMUST00000226068	-	6633	XM_006526994	ENSMUSP00000153225	2061 (aa)	XP_006527057	A0A286YDF5
ENSMUST00000225287	-	718	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000048612's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000048612's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000048612	Myof	100	93.994	ENSG00000138119	MYOF	100	93.994	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001778	plasma membrane repair	17702744.	IMP	Process
GO:0005543	phospholipid binding	17702744.	IMP	Function
GO:0005543	phospholipid binding	-	ISO	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0005901	caveola	17702744.	IDA	Component
GO:0006071	glycerol metabolic process	24177035.	IGI	Process
GO:0007520	myoblast fusion	-	IEA	Process
GO:0016020	membrane	-	IEA	Component
GO:0016021	integral component of membrane	-	IEA	Component
GO:0030947	regulation of vascular endothelial growth factor receptor signaling pathway	17702744.	IMP	Process
GO:0031410	cytoplasmic vesicle	-	ISO	Component
GO:0033292	T-tubule organization	24177035.	IGI	Process
GO:0034605	cellular response to heat	18755693.	IDA	Process
GO:0043231	intracellular membrane-bounded organelle	-	ISO	Component
GO:0048747	muscle fiber development	24177035.	IGI	Process