EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000048728 (Gene tree)
Gene ID: 237758
Gene Symbol: Zfp454
Alias: -
Full Name: zinc finger protein 454
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 14932 bases
Position: chr11:50872720-50887651
Accession: 2679253
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000104759	zf-C2H2	PF00096.26	3.8e-64	1	11
ENSMUSP00000104759	zf-C2H2	PF00096.26	3.8e-64	2	11
ENSMUSP00000104759	zf-C2H2	PF00096.26	3.8e-64	3	11
ENSMUSP00000104759	zf-C2H2	PF00096.26	3.8e-64	4	11
ENSMUSP00000104759	zf-C2H2	PF00096.26	3.8e-64	5	11
ENSMUSP00000104759	zf-C2H2	PF00096.26	3.8e-64	6	11
ENSMUSP00000104759	zf-C2H2	PF00096.26	3.8e-64	7	11
ENSMUSP00000104759	zf-C2H2	PF00096.26	3.8e-64	8	11
ENSMUSP00000104759	zf-C2H2	PF00096.26	3.8e-64	9	11
ENSMUSP00000104759	zf-C2H2	PF00096.26	3.8e-64	10	11
ENSMUSP00000104759	zf-C2H2	PF00096.26	3.8e-64	11	11
ENSMUSP00000061824	zf-C2H2	PF00096.26	9.9e-63	1	11
ENSMUSP00000061824	zf-C2H2	PF00096.26	9.9e-63	2	11
ENSMUSP00000061824	zf-C2H2	PF00096.26	9.9e-63	3	11
ENSMUSP00000061824	zf-C2H2	PF00096.26	9.9e-63	4	11
ENSMUSP00000061824	zf-C2H2	PF00096.26	9.9e-63	5	11
ENSMUSP00000061824	zf-C2H2	PF00096.26	9.9e-63	6	11
ENSMUSP00000061824	zf-C2H2	PF00096.26	9.9e-63	7	11
ENSMUSP00000061824	zf-C2H2	PF00096.26	9.9e-63	8	11
ENSMUSP00000061824	zf-C2H2	PF00096.26	9.9e-63	9	11
ENSMUSP00000061824	zf-C2H2	PF00096.26	9.9e-63	10	11
ENSMUSP00000061824	zf-C2H2	PF00096.26	9.9e-63	11	11
ENSMUSP00000129125	zf-C2H2	PF00096.26	9.9e-63	1	11
ENSMUSP00000129125	zf-C2H2	PF00096.26	9.9e-63	2	11
ENSMUSP00000129125	zf-C2H2	PF00096.26	9.9e-63	3	11
ENSMUSP00000129125	zf-C2H2	PF00096.26	9.9e-63	4	11
ENSMUSP00000129125	zf-C2H2	PF00096.26	9.9e-63	5	11
ENSMUSP00000129125	zf-C2H2	PF00096.26	9.9e-63	6	11
ENSMUSP00000129125	zf-C2H2	PF00096.26	9.9e-63	7	11
ENSMUSP00000129125	zf-C2H2	PF00096.26	9.9e-63	8	11
ENSMUSP00000129125	zf-C2H2	PF00096.26	9.9e-63	9	11
ENSMUSP00000129125	zf-C2H2	PF00096.26	9.9e-63	10	11
ENSMUSP00000129125	zf-C2H2	PF00096.26	9.9e-63	11	11
ENSMUSP00000061824	zf-met	PF12874.7	0.00075	1	1
ENSMUSP00000129125	zf-met	PF12874.7	0.00075	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000050595	-	2059	-	ENSMUSP00000061824	536 (aa)	-	Q80Y34
ENSMUST00000136599	-	606	-	-	- (aa)	-	-
ENSMUST00000126718	-	579	-	-	- (aa)	-	-
ENSMUST00000163301	-	2090	XM_011248979	ENSMUSP00000129125	536 (aa)	XP_011247281	Q80Y34
ENSMUST00000109131	-	1957	XM_006533208	ENSMUSP00000104759	425 (aa)	XP_006533271	Q5NCH7
ENSMUST00000125749	-	722	-	ENSMUSP00000122658	122 (aa)	-	Q5NCH5

Gene Model

Click here to download ENSMUSG00000048728's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000048728's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000048728	Zfp454	86	51.095	ENSMUSG00000047371	Zfp768	51	50.523
ENSMUSG00000048728	Zfp454	92	51.556	ENSMUSG00000074824	Rslcan18	87	51.556
ENSMUSG00000048728	Zfp454	93	52.342	ENSMUSG00000055305	Zfp93	73	52.342
ENSMUSG00000048728	Zfp454	98	50.142	ENSMUSG00000095432	Zfp748	100	50.142
ENSMUSG00000048728	Zfp454	99	50.292	ENSMUSG00000062743	Zfp677	99	50.549
ENSMUSG00000048728	Zfp454	98	47.879	ENSMUSG00000054519	Zfp867	96	49.583
ENSMUSG00000048728	Zfp454	100	50.523	ENSMUSG00000074282	Zfp94	97	50.523
ENSMUSG00000048728	Zfp454	99	54.412	ENSMUSG00000022526	Zfp251	96	51.948
ENSMUSG00000048728	Zfp454	93	52.134	ENSMUSG00000074472	Zfp872	99	46.667
ENSMUSG00000048728	Zfp454	99	44.571	ENSMUSG00000069743	Zfp820	93	48.485
ENSMUSG00000048728	Zfp454	99	45.299	ENSMUSG00000057551	Zfp317	96	45.507
ENSMUSG00000048728	Zfp454	99	50.814	ENSMUSG00000114923	Gm49345	99	52.601
ENSMUSG00000048728	Zfp454	98	51.136	ENSMUSG00000063108	Zfp26	89	51.136
ENSMUSG00000048728	Zfp454	98	51.220	ENSMUSG00000047603	Zfp235	78	57.778
ENSMUSG00000048728	Zfp454	100	48.343	ENSMUSG00000020364	Zfp354a	100	50.970
ENSMUSG00000048728	Zfp454	90	49.342	ENSMUSG00000070709	Zfp974	90	49.858
ENSMUSG00000048728	Zfp454	98	41.779	ENSMUSG00000089857	Zfp882	99	44.110
ENSMUSG00000048728	Zfp454	81	53.226	ENSMUSG00000050605	Zfp61	60	66.667
ENSMUSG00000048728	Zfp454	86	50.565	ENSMUSG00000091474	2610021A01Rik	64	55.556
ENSMUSG00000048728	Zfp454	99	48.193	ENSMUSG00000068962	Zfp114	99	48.193
ENSMUSG00000048728	Zfp454	100	55.556	ENSMUSG00000034800	Zfp661	98	55.405
ENSMUSG00000048728	Zfp454	91	48.199	ENSMUSG00000012640	Zfp715	61	57.778
ENSMUSG00000048728	Zfp454	98	50.167	ENSMUSG00000030486	Zfp108	99	50.696
ENSMUSG00000048728	Zfp454	87	57.803	ENSMUSG00000058402	Zfp420	98	59.532
ENSMUSG00000048728	Zfp454	100	49.851	ENSMUSG00000023892	Zfp51	95	60.714
ENSMUSG00000048728	Zfp454	98	49.008	ENSMUSG00000052675	Zfp112	73	57.143
ENSMUSG00000048728	Zfp454	98	43.782	ENSMUSG00000017667	Zfp334	99	44.615
ENSMUSG00000048728	Zfp454	83	42.424	ENSMUSG00000006215	Zbtb17	55	43.322
ENSMUSG00000048728	Zfp454	97	37.859	ENSMUSG00000030823	9130019O22Rik	90	44.695
ENSMUSG00000048728	Zfp454	99	45.822	ENSMUSG00000059142	Zfp945	99	46.197
ENSMUSG00000048728	Zfp454	99	52.145	ENSMUSG00000092416	Zfp141	99	52.145
ENSMUSG00000048728	Zfp454	98	49.014	ENSMUSG00000056019	Zfp709	99	49.014
ENSMUSG00000048728	Zfp454	98	47.688	ENSMUSG00000057396	Zfp759	100	47.688
ENSMUSG00000048728	Zfp454	99	52.464	ENSMUSG00000087598	Zfp111	99	52.464

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000048728	Zfp454	99	79.762	ENSCAPG00000006920	-	100	79.762	Cavia_aperea
ENSMUSG00000048728	Zfp454	99	79.524	ENSCPOG00000035563	-	100	79.524	Cavia_porcellus
ENSMUSG00000048728	Zfp454	99	80.963	ENSCATG00000031926	ZNF454	100	75.774	Cercocebus_atys
ENSMUSG00000048728	Zfp454	99	80.615	ENSCLAG00000010195	-	100	80.615	Chinchilla_lanigera
ENSMUSG00000048728	Zfp454	100	88.785	ENSCGRG00001013939	Zfp454	100	83.704	Cricetulus_griseus_chok1gshd
ENSMUSG00000048728	Zfp454	100	88.785	ENSCGRG00000014813	Zfp454	100	84.787	Cricetulus_griseus_crigri
ENSMUSG00000048728	Zfp454	99	81.193	ENSEASG00005012616	ZNF454	100	74.556	Equus_asinus_asinus
ENSMUSG00000048728	Zfp454	99	78.802	ENSEEUG00000007684	ZNF454	99	71.190	Erinaceus_europaeus
ENSMUSG00000048728	Zfp454	99	80.734	ENSMFAG00000043337	ZNF454	100	75.774	Macaca_fascicularis
ENSMUSG00000048728	Zfp454	99	80.734	ENSMMUG00000045647	ZNF454	100	75.774	Macaca_mulatta
ENSMUSG00000048728	Zfp454	99	80.734	ENSMNEG00000002699	ZNF454	100	75.774	Macaca_nemestrina
ENSMUSG00000048728	Zfp454	99	80.505	ENSMLEG00000039955	ZNF454	100	75.592	Mandrillus_leucophaeus
ENSMUSG00000048728	Zfp454	99	81.651	ENSMLUG00000002894	ZNF454	100	75.830	Myotis_lucifugus
ENSMUSG00000048728	Zfp454	99	80.734	ENSPANG00000009509	ZNF454	100	75.774	Papio_anubis
ENSMUSG00000048728	Zfp454	99	80.734	ENSSSCG00000027351	ZNF454	100	75.091	Sus_scrofa
ENSMUSG00000048728	Zfp454	99	79.908	ENSUAMG00000026246	ZNF454	100	78.604	Ursus_americanus
ENSMUSG00000048728	Zfp454	99	80.093	ENSUMAG00000023930	ZNF454	95	73.293	Ursus_maritimus
ENSMUSG00000048728	Zfp454	99	80.706	ENSVVUG00000001267	ZNF454	84	74.019	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005575	cellular_component	-	ND	Component