EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000048874 (Gene tree)
Gene ID: 213109
Gene Symbol: Phf3
Alias: 2310061N19Rik|AU020177
Full Name: PHD finger protein 3
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 71583
Position: chr1: 30802339-30873921
Accession: 2446126
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000188780	-	941	-	ENSMUSP00000140935	199 (aa)	-	A0A087WS81
ENSMUST00000190190	-	543	-	-	- (aa)	-	-
ENSMUST00000088310	-	7561	XM_006495837	ENSMUSP00000085650	2025 (aa)	XP_006495900	B2RQG2
ENSMUST00000191064	-	1309	-	ENSMUSP00000140746	154 (aa)	-	A0A087WRR9
ENSMUST00000187968	-	416	-	ENSMUSP00000139454	53 (aa)	-	A0A087WNQ9
ENSMUST00000186733	-	7567	XM_006495836	ENSMUSP00000139610	2025 (aa)	XP_006495899	B2RQG2
ENSMUST00000187316	-	583	-	-	- (aa)	-	-
ENSMUST00000185604	-	824	-	-	- (aa)	-	-
ENSMUST00000191245	-	2410	-	-	- (aa)	-	-
ENSMUST00000186105	-	1552	-	-	- (aa)	-	-
ENSMUST00000187600	-	188	-	-	- (aa)	-	-
ENSMUST00000185521	-	1313	-	-	- (aa)	-	-
ENSMUST00000191329	-	2939	-	ENSMUSP00000139662	111 (aa)	-	A0A087WP76
ENSMUST00000188847	-	2786	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000048874's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000048874's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000048874	Phf3	100	98.113	ENSG00000118482	PHF3	99	98.765	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0005575	cellular_component	-	ND	Component
GO:0008150	biological_process	-	ND	Process