EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000049775 (Gene tree)
Gene ID: 19241
Gene Symbol: Tmsb4x
Alias: Ptmb4|Tb4|Tbeta4
Full Name: thymosin%2C beta 4%2C X chromosome
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 2223
Position: chrX: 167207093-167209315
Accession: 99510
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000112172	-	768	XM_006528759	ENSMUSP00000107795	44 (aa)	XP_006528822	P20065
ENSMUST00000112176	-	698	-	ENSMUSP00000107798	50 (aa)	-	P20065
ENSMUST00000112175	-	864	-	ENSMUSP00000107797	50 (aa)	-	P20065

Gene Model

Click here to download ENSMUSG00000049775's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04810	Regulation of actin cytoskeleton	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000049775's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000049775	Tmsb4x	100	100.000	ENSG00000205542	TMSB4X	100	100.000	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003779	actin binding	-	IEA	Function
GO:0003785	actin monomer binding	21873635.	IBA	Function
GO:0005515	protein binding	15565145.18519035.	IPI	Function
GO:0005615	extracellular space	24006456.	HDA	Component
GO:0005634	nucleus	15565145.	IDA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005829	cytosol	15565145.	IDA	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0007015	actin filament organization	-	IEA	Process
GO:0014911	positive regulation of smooth muscle cell migration	20299672.	TAS	Process
GO:0030334	regulation of cell migration	21873635.	IBA	Process
GO:0030334	regulation of cell migration	15565145.	IDA	Process
GO:0042989	sequestering of actin monomers	21873635.	IBA	Process
GO:0045893	positive regulation of transcription, DNA-templated	20299672.	TAS	Process
GO:0051152	positive regulation of smooth muscle cell differentiation	20299672.	TAS	Process