EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000049815 (Gene tree)
Gene ID
245598
Gene Symbol
4921511C20Rik
Alias
LOC245598
Full Name
RIKEN cDNA 4921511C20 gene
Gene Type
protein_coding
Species
Mus_musculus
Status
putative
Strand
Plus strand
Length
1606 bases
Position
chrX:127394293-127395898
Accession
2685229
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000059542KH_1PF00013.297.4e-4113
ENSMUSP00000059542KH_1PF00013.297.4e-4123
ENSMUSP00000059542KH_1PF00013.297.4e-4133
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000051530-1606-ENSMUSP00000059542469 (aa)-Q8BVT7
Gene Model
Click here to download ENSMUSG00000049815's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000049815's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG000000498154921511C20Rik9959.915ENSMUSG00000062791Gm3827259.915
ENSMUSG000000498154921511C20Rik10046.008ENSMUSG00000034088Hdlbp9146.008
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG000000498154921511C20Rik10050.512ENSG00000115677HDLBP9953.097Homo_sapiens
ENSMUSG000000498154921511C20Rik10042.947ENSAPOG00000012609hdlbpa9042.947Acanthochromis_polyacanthus
ENSMUSG000000498154921511C20Rik10046.203ENSAMEG00000016552HDLBP8746.203Ailuropoda_melanoleuca
ENSMUSG000000498154921511C20Rik10043.413ENSACIG00000006015hdlbpa9043.413Amphilophus_citrinellus
ENSMUSG000000498154921511C20Rik10042.737ENSAOCG00000000300hdlbpa9042.737Amphiprion_ocellaris
ENSMUSG000000498154921511C20Rik10042.737ENSAPEG00000000522hdlbpa9542.737Amphiprion_percula
ENSMUSG000000498154921511C20Rik10042.737ENSATEG00000009748hdlbpa9042.737Anabas_testudineus
ENSMUSG000000498154921511C20Rik10045.359ENSACAG00000001556HDLBP8745.359Anolis_carolinensis
ENSMUSG000000498154921511C20Rik10046.624ENSANAG00000020545HDLBP8846.624Aotus_nancymaae
ENSMUSG000000498154921511C20Rik10042.105ENSACLG00000025965hdlbpa9042.105Astatotilapia_calliptera
ENSMUSG000000498154921511C20Rik10042.227ENSAMXG00000004221hdlbpa9742.227Astyanax_mexicanus
ENSMUSG000000498154921511C20Rik10046.624ENSBTAG00000004315HDLBP8746.624Bos_taurus
ENSMUSG000000498154921511C20Rik10046.203ENSCJAG00000006152HDLBP8846.203Callithrix_jacchus
ENSMUSG000000498154921511C20Rik10046.414ENSCAFG00000012913HDLBP9446.414Canis_familiaris
ENSMUSG000000498154921511C20Rik10046.414ENSCAFG00020025089HDLBP8746.414Canis_lupus_dingo
ENSMUSG000000498154921511C20Rik10046.203ENSCHIG00000022364HDLBP9145.530Capra_hircus
ENSMUSG000000498154921511C20Rik10046.414ENSTSYG00000002379HDLBP8746.414Carlito_syrichta
ENSMUSG000000498154921511C20Rik10045.975ENSCAPG00000008584HDLBP8945.975Cavia_aperea
ENSMUSG000000498154921511C20Rik10045.975ENSCPOG00000006297HDLBP9145.975Cavia_porcellus
ENSMUSG000000498154921511C20Rik10045.992ENSCCAG00000023361-8845.992Cebus_capucinus
ENSMUSG000000498154921511C20Rik10043.789ENSCCAG00000037920-8743.789Cebus_capucinus
ENSMUSG000000498154921511C20Rik10047.158ENSCATG00000039363HDLBP8747.158Cercocebus_atys
ENSMUSG000000498154921511C20Rik10045.763ENSCLAG00000002365HDLBP9145.763Chinchilla_lanigera
ENSMUSG000000498154921511C20Rik10047.158ENSCSAG00000005781HDLBP8647.158Chlorocebus_sabaeus
ENSMUSG000000498154921511C20Rik9738.788ENSCHOG00000003882-5338.788Choloepus_hoffmanni
ENSMUSG000000498154921511C20Rik10041.983ENSCPBG00000002442HDLBP8741.983Chrysemys_picta_bellii
ENSMUSG000000498154921511C20Rik10047.158ENSCANG00000033571HDLBP8947.158Colobus_angolensis_palliatus
ENSMUSG000000498154921511C20Rik10046.218ENSCGRG00001006086Hdlbp9146.218Cricetulus_griseus_chok1gshd
ENSMUSG000000498154921511C20Rik10080.171ENSCGRG000010105704921511C20Rik10080.171Cricetulus_griseus_chok1gshd
ENSMUSG000000498154921511C20Rik10046.218ENSCGRG00000014444Hdlbp8746.218Cricetulus_griseus_crigri
ENSMUSG000000498154921511C20Rik9962.047ENSCGRG00000015720Gm3826962.047Cricetulus_griseus_crigri
ENSMUSG000000498154921511C20Rik10042.526ENSCSEG00000008853hdlbpa9142.526Cynoglossus_semilaevis
ENSMUSG000000498154921511C20Rik10041.350ENSCVAG00000017892hdlbpa9041.350Cyprinodon_variegatus
ENSMUSG000000498154921511C20Rik10040.756ENSDARG00000009830hdlbpa9140.756Danio_rerio
ENSMUSG000000498154921511C20Rik10044.842ENSDNOG00000006753HDLBP8744.842Dasypus_novemcinctus
ENSMUSG000000498154921511C20Rik9848.400ENSETEG00000005416-5748.400Echinops_telfairi
ENSMUSG000000498154921511C20Rik10046.203ENSEASG00005008249HDLBP8746.203Equus_asinus_asinus
ENSMUSG000000498154921511C20Rik9950.851ENSECAG00000028723-7550.851Equus_caballus
ENSMUSG000000498154921511C20Rik9850.909ENSECAG00000030885-6550.909Equus_caballus
ENSMUSG000000498154921511C20Rik10046.203ENSECAG00000012829HDLBP8746.203Equus_caballus
ENSMUSG000000498154921511C20Rik9940.652ENSEEUG00000014648HDLBP7740.652Erinaceus_europaeus
ENSMUSG000000498154921511C20Rik10040.519ENSELUG00000010700hdlbpa9140.519Esox_lucius
ENSMUSG000000498154921511C20Rik10045.992ENSFCAG00000010455HDLBP8745.992Felis_catus
ENSMUSG000000498154921511C20Rik10046.008ENSFALG00000003437HDLBP8746.218Ficedula_albicollis
ENSMUSG000000498154921511C20Rik10045.877ENSFDAG00000000456HDLBP9145.877Fukomys_damarensis
ENSMUSG000000498154921511C20Rik10042.947ENSFHEG00000004848hdlbpa9042.947Fundulus_heteroclitus
ENSMUSG000000498154921511C20Rik10042.050ENSGMOG00000009932hdlbpa9042.050Gadus_morhua
ENSMUSG000000498154921511C20Rik10045.798ENSGALG00000005823HDLBP8746.639Gallus_gallus
ENSMUSG000000498154921511C20Rik10040.928ENSGAFG00000016766hdlbpa8940.928Gambusia_affinis
ENSMUSG000000498154921511C20Rik10041.263ENSGACG00000004648hdlbpa9041.263Gasterosteus_aculeatus
ENSMUSG000000498154921511C20Rik10046.414ENSGAGG00000004256HDLBP8746.414Gopherus_agassizii
ENSMUSG000000498154921511C20Rik10046.624ENSGGOG00000004392HDLBP8846.624Gorilla_gorilla
ENSMUSG000000498154921511C20Rik10042.105ENSHBUG00000001136hdlbpa9042.105Haplochromis_burtoni
ENSMUSG000000498154921511C20Rik10045.877ENSHGLG00000004910HDLBP9145.877Heterocephalus_glaber_female
ENSMUSG000000498154921511C20Rik10045.877ENSHGLG00100013326HDLBP9145.877Heterocephalus_glaber_male
ENSMUSG000000498154921511C20Rik10042.017ENSHCOG00000014837hdlbpa8942.017Hippocampus_comes
ENSMUSG000000498154921511C20Rik10042.887ENSIPUG00000013088hdlbp8942.887Ictalurus_punctatus
ENSMUSG000000498154921511C20Rik5741.948ENSIPUG00000013177-9141.948Ictalurus_punctatus
ENSMUSG000000498154921511C20Rik10045.666ENSSTOG00000013331HDLBP8745.666Ictidomys_tridecemlineatus
ENSMUSG000000498154921511C20Rik8751.716ENSJJAG00000013712-6451.716Jaculus_jaculus
ENSMUSG000000498154921511C20Rik10046.414ENSJJAG00000003596Hdlbp9146.414Jaculus_jaculus
ENSMUSG000000498154921511C20Rik10041.684ENSKMAG00000007571hdlbpa9141.684Kryptolebias_marmoratus
ENSMUSG000000498154921511C20Rik10041.754ENSLBEG00000027461hdlbpa9041.754Labrus_bergylta
ENSMUSG000000498154921511C20Rik10045.684ENSLACG00000003592HDLBP8745.684Latimeria_chalumnae
ENSMUSG000000498154921511C20Rik10042.138ENSLOCG00000006278hdlbpa9042.138Lepisosteus_oculatus
ENSMUSG000000498154921511C20Rik10046.203ENSLAFG00000014826HDLBP8746.203Loxodonta_africana
ENSMUSG000000498154921511C20Rik10047.158ENSMFAG00000033641HDLBP9147.158Macaca_fascicularis
ENSMUSG000000498154921511C20Rik10047.158ENSMMUG00000004730HDLBP8947.158Macaca_mulatta
ENSMUSG000000498154921511C20Rik10047.158ENSMNEG00000024260HDLBP8747.158Macaca_nemestrina
ENSMUSG000000498154921511C20Rik10047.158ENSMLEG00000042734HDLBP8747.158Mandrillus_leucophaeus
ENSMUSG000000498154921511C20Rik10042.105ENSMAMG00000008611hdlbpa9042.227Mastacembelus_armatus
ENSMUSG000000498154921511C20Rik10042.105ENSMZEG00005009513hdlbpa9042.105Maylandia_zebra
ENSMUSG000000498154921511C20Rik10045.798ENSMGAG00000003686HDLBP9846.429Meleagris_gallopavo
ENSMUSG000000498154921511C20Rik10046.429ENSMAUG00000017743Hdlbp9146.429Mesocricetus_auratus
ENSMUSG000000498154921511C20Rik10045.148ENSMICG00000004569HDLBP8845.148Microcebus_murinus
ENSMUSG000000498154921511C20Rik10046.639ENSMOCG00000006679Hdlbp9146.639Microtus_ochrogaster
ENSMUSG000000498154921511C20Rik9144.048ENSMMOG00000006880hdlbpa8644.048Mola_mola
ENSMUSG000000498154921511C20Rik10045.585ENSMODG00000016033HDLBP8745.585Monodelphis_domestica
ENSMUSG000000498154921511C20Rik10042.678ENSMALG00000015095hdlbpa9042.647Monopterus_albus
ENSMUSG000000498154921511C20Rik10095.096MGP_CAROLIEiJ_G00333744921511C20Rik10095.096Mus_caroli
ENSMUSG000000498154921511C20Rik9959.488MGP_CAROLIEiJ_G0033373Gm3827859.488Mus_caroli
ENSMUSG000000498154921511C20Rik10046.008MGP_CAROLIEiJ_G0014456Hdlbp9146.008Mus_caroli
ENSMUSG000000498154921511C20Rik10046.008MGP_PahariEiJ_G0027692Hdlbp9146.008Mus_pahari
ENSMUSG000000498154921511C20Rik9960.554MGP_PahariEiJ_G0031913Gm3827260.554Mus_pahari
ENSMUSG000000498154921511C20Rik10091.471MGP_PahariEiJ_G00319144921511C20Rik10091.471Mus_pahari
ENSMUSG000000498154921511C20Rik9960.128MGP_SPRETEiJ_G0034538Gm3827260.128Mus_spretus
ENSMUSG000000498154921511C20Rik10098.507MGP_SPRETEiJ_G00345394921511C20Rik10098.507Mus_spretus
ENSMUSG000000498154921511C20Rik10046.008MGP_SPRETEiJ_G0015260Hdlbp9146.008Mus_spretus
ENSMUSG000000498154921511C20Rik10045.992ENSMPUG00000000163HDLBP8745.992Mustela_putorius_furo
ENSMUSG000000498154921511C20Rik10045.666ENSMLUG00000005628HDLBP8745.666Myotis_lucifugus
ENSMUSG000000498154921511C20Rik10046.203ENSNGAG00000014873Hdlbp9146.203Nannospalax_galili
ENSMUSG000000498154921511C20Rik10042.469ENSNBRG00000000051hdlbpa9142.105Neolamprologus_brichardi
ENSMUSG000000498154921511C20Rik9147.059ENSNLEG00000031018-8447.059Nomascus_leucogenys
ENSMUSG000000498154921511C20Rik10047.046ENSNLEG00000013818HDLBP8747.046Nomascus_leucogenys
ENSMUSG000000498154921511C20Rik9940.674ENSMEUG00000008427HDLBP5340.674Notamacropus_eugenii
ENSMUSG000000498154921511C20Rik9945.745ENSOPRG00000011965-8745.745Ochotona_princeps
ENSMUSG000000498154921511C20Rik10046.398ENSODEG00000012313-9146.398Octodon_degus
ENSMUSG000000498154921511C20Rik10045.032ENSODEG00000017391-8745.032Octodon_degus
ENSMUSG000000498154921511C20Rik10042.316ENSONIG00000019272hdlbpa9042.678Oreochromis_niloticus
ENSMUSG000000498154921511C20Rik10046.300ENSOANG00000011759-9046.300Ornithorhynchus_anatinus
ENSMUSG000000498154921511C20Rik10045.570ENSOCUG00000012667HDLBP8745.570Oryctolagus_cuniculus
ENSMUSG000000498154921511C20Rik10041.408ENSORLG00000002226hdlbpa9041.408Oryzias_latipes
ENSMUSG000000498154921511C20Rik10041.615ENSORLG00020007905hdlbpa9041.615Oryzias_latipes_hni
ENSMUSG000000498154921511C20Rik10041.408ENSORLG00015004126hdlbpa9041.201Oryzias_latipes_hsok
ENSMUSG000000498154921511C20Rik10037.500ENSOMEG00000000247hdlbpa9037.708Oryzias_melastigma
ENSMUSG000000498154921511C20Rik10047.046ENSOGAG00000000738HDLBP8747.046Otolemur_garnettii
ENSMUSG000000498154921511C20Rik10044.726ENSOARG00000017870HDLBP8744.726Ovis_aries
ENSMUSG000000498154921511C20Rik10046.414ENSPPAG00000023318HDLBP8846.414Pan_paniscus
ENSMUSG000000498154921511C20Rik10045.992ENSPPRG00000010215HDLBP8745.992Panthera_pardus
ENSMUSG000000498154921511C20Rik10044.351ENSPTIG00000009328HDLBP8944.351Panthera_tigris_altaica
ENSMUSG000000498154921511C20Rik10046.624ENSPTRG00000013121HDLBP8846.624Pan_troglodytes
ENSMUSG000000498154921511C20Rik10046.835ENSPANG00000011832HDLBP8746.835Papio_anubis
ENSMUSG000000498154921511C20Rik10042.348ENSPKIG00000002392hdlbpa9042.348Paramormyrops_kingsleyae
ENSMUSG000000498154921511C20Rik8549.180ENSPSIG00000010068HDLBP8649.180Pelodiscus_sinensis
ENSMUSG000000498154921511C20Rik10042.259ENSPMGG00000002102hdlbpa9142.259Periophthalmus_magnuspinnatus
ENSMUSG000000498154921511C20Rik10046.639ENSPEMG00000017704Hdlbp9146.639Peromyscus_maniculatus_bairdii
ENSMUSG000000498154921511C20Rik9846.237ENSPCIG00000015375HDLBP8246.237Phascolarctos_cinereus
ENSMUSG000000498154921511C20Rik10041.350ENSPFOG00000000236hdlbpa9041.350Poecilia_formosa
ENSMUSG000000498154921511C20Rik9146.049ENSPLAG00000006033hdlbpa8945.946Poecilia_latipinna
ENSMUSG000000498154921511C20Rik10041.895ENSPMEG00000006627hdlbpa8741.895Poecilia_mexicana
ENSMUSG000000498154921511C20Rik10039.868ENSPREG00000014450hdlbpa9039.868Poecilia_reticulata
ENSMUSG000000498154921511C20Rik10046.835ENSPPYG00000013351HDLBP8746.835Pongo_abelii
ENSMUSG000000498154921511C20Rik10045.570ENSPCOG00000021622HDLBP9145.570Propithecus_coquereli
ENSMUSG000000498154921511C20Rik10045.992ENSPVAG00000000555HDLBP8745.666Pteropus_vampyrus
ENSMUSG000000498154921511C20Rik10042.105ENSPNYG00000020753hdlbpa9042.105Pundamilia_nyererei
ENSMUSG000000498154921511C20Rik10042.797ENSPNAG00000029610hdlbpa9142.797Pygocentrus_nattereri
ENSMUSG000000498154921511C20Rik9987.716ENSRNOG00000042823RGD15612306987.420Rattus_norvegicus
ENSMUSG000000498154921511C20Rik9354.897ENSRNOG00000028847AABR07040251.110054.897Rattus_norvegicus
ENSMUSG000000498154921511C20Rik9962.047ENSRNOG00000031294RGD15631047262.047Rattus_norvegicus
ENSMUSG000000498154921511C20Rik10046.008ENSRNOG00000031479Hdlbp8746.008Rattus_norvegicus
ENSMUSG000000498154921511C20Rik10047.158ENSRBIG00000041381HDLBP8947.158Rhinopithecus_bieti
ENSMUSG000000498154921511C20Rik10047.158ENSRROG00000034263HDLBP8947.158Rhinopithecus_roxellana
ENSMUSG000000498154921511C20Rik10046.526ENSSBOG00000029714-8546.526Saimiri_boliviensis_boliviensis
ENSMUSG000000498154921511C20Rik10043.671ENSSBOG00000033067-8143.671Saimiri_boliviensis_boliviensis
ENSMUSG000000498154921511C20Rik10047.046ENSSHAG00000012422HDLBP8747.046Sarcophilus_harrisii
ENSMUSG000000498154921511C20Rik10041.807ENSSFOG00015018627hdlbp8741.387Scleropages_formosus
ENSMUSG000000498154921511C20Rik10042.947ENSSMAG00000002382hdlbpa8942.947Scophthalmus_maximus
ENSMUSG000000498154921511C20Rik10043.096ENSSDUG00000022258hdlbpa9043.096Seriola_dumerili
ENSMUSG000000498154921511C20Rik10042.947ENSSLDG00000004437hdlbpa9042.887Seriola_lalandi_dorsalis
ENSMUSG000000498154921511C20Rik10041.102ENSSARG00000012639HDLBP6041.102Sorex_araneus
ENSMUSG000000498154921511C20Rik10046.414ENSSPUG00000009182HDLBP8746.414Sphenodon_punctatus
ENSMUSG000000498154921511C20Rik10043.158ENSSPAG00000009145hdlbpa9043.158Stegastes_partitus
ENSMUSG000000498154921511C20Rik10045.359ENSSSCG00000016379HDLBP9445.359Sus_scrofa
ENSMUSG000000498154921511C20Rik8549.275ENSTGUG00000006189HDLBP8550.362Taeniopygia_guttata
ENSMUSG000000498154921511C20Rik10040.764ENSTRUG00000012148hdlbpa9040.764Takifugu_rubripes
ENSMUSG000000498154921511C20Rik9742.082ENSTNIG00000004185hdlbpa9042.082Tetraodon_nigroviridis
ENSMUSG000000498154921511C20Rik8556.858ENSTBEG00000001860HDLBP6156.858Tupaia_belangeri
ENSMUSG000000498154921511C20Rik9745.455ENSTTRG00000015251HDLBP6345.455Tursiops_truncatus
ENSMUSG000000498154921511C20Rik9949.180ENSUAMG00000018383HDLBP8649.180Ursus_americanus
ENSMUSG000000498154921511C20Rik10046.429ENSUMAG00000010539HDLBP8746.429Ursus_maritimus
ENSMUSG000000498154921511C20Rik8553.731ENSVPAG00000003112HDLBP6953.731Vicugna_pacos
ENSMUSG000000498154921511C20Rik9950.123ENSVVUG00000022797HDLBP8649.454Vulpes_vulpes
ENSMUSG000000498154921511C20Rik10042.737ENSXETG00000012164hdlbp8942.737Xenopus_tropicalis
ENSMUSG000000498154921511C20Rik10041.474ENSXCOG00000005943hdlbpa9041.474Xiphophorus_couchianus
ENSMUSG000000498154921511C20Rik10041.263ENSXMAG00000003787hdlbpa8941.263Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003674molecular_function-NDFunction
GO:0005575cellular_component-NDComponent
GO:0008150biological_process-NDProcess

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