EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000049957 (Gene tree)
Gene ID: 67291
Gene Symbol: Ccdc137
Alias: 3110023B02Rik
Full Name: coiled-coil domain containing 137
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 6244
Position: chr11: 120458115-120464358
Accession: 1914541
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000140308	-	375	-	-	- (aa)	-	-
ENSMUST00000058370	-	2778	XM_006533981	ENSMUSP00000062540	290 (aa)	XP_006534044	Q8R0K4
ENSMUST00000150400	-	701	-	-	- (aa)	-	-
ENSMUST00000176120	-	724	-	ENSMUSP00000135801	241 (aa)	-	H3BLI5
ENSMUST00000145702	-	1074	-	-	- (aa)	-	-
ENSMUST00000175970	-	336	-	ENSMUSP00000134921	111 (aa)	-	H3BJB7
ENSMUST00000148849	-	408	-	-	- (aa)	-	-
ENSMUST00000176717	-	424	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000049957's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000049957's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000049957	Ccdc137	93	72.894	ENSG00000185298	CCDC137	87	77.358	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001650	fibrillar center	-	ISO	Component
GO:0005694	chromosome	-	ISO	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0008150	biological_process	-	ND	Process