EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000049960 (Gene tree)
Gene ID: 66242
Gene Symbol: Mrps16
Alias: -
Full Name: mitochondrial ribosomal protein S16
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 4331 bases
Position: chr14:20389304-20393634
Accession: 1913492
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000055619	Ribosomal_S16	PF00886.19	6e-23	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000061444	-	2572	-	ENSMUSP00000055619	135 (aa)	-	Q9CPX7
ENSMUST00000224286	-	801	NR_155747	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000049960's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000049960's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000049960	Mrps16	100	91.111	ENSG00000182180	MRPS16	99	91.111	Homo_sapiens
ENSMUSG00000049960	Mrps16	82	66.372	ENSAPOG00000012117	mrps16	78	66.355	Acanthochromis_polyacanthus
ENSMUSG00000049960	Mrps16	96	86.923	ENSAMEG00000016931	MRPS16	99	86.923	Ailuropoda_melanoleuca
ENSMUSG00000049960	Mrps16	82	68.142	ENSACIG00000008004	mrps16	78	68.224	Amphilophus_citrinellus
ENSMUSG00000049960	Mrps16	82	67.257	ENSAOCG00000006801	mrps16	78	66.667	Amphiprion_ocellaris
ENSMUSG00000049960	Mrps16	82	66.372	ENSAPEG00000004562	mrps16	78	65.741	Amphiprion_percula
ENSMUSG00000049960	Mrps16	87	64.167	ENSATEG00000024962	mrps16	78	66.355	Anabas_testudineus
ENSMUSG00000049960	Mrps16	100	90.370	ENSANAG00000036208	MRPS16	94	95.699	Aotus_nancymaae
ENSMUSG00000049960	Mrps16	81	68.468	ENSACLG00000016154	mrps16	78	68.224	Astatotilapia_calliptera
ENSMUSG00000049960	Mrps16	81	69.725	ENSAMXG00000040279	mrps16	98	58.519	Astyanax_mexicanus
ENSMUSG00000049960	Mrps16	81	70.000	ENSBTAG00000053412	-	96	68.868	Bos_taurus
ENSMUSG00000049960	Mrps16	100	88.148	ENSBTAG00000000950	MRPS16	100	88.148	Bos_taurus
ENSMUSG00000049960	Mrps16	72	48.515	WBGene00018961	mrps-16	62	51.648	Caenorhabditis_elegans
ENSMUSG00000049960	Mrps16	100	89.630	ENSCJAG00000007538	MRPS16	99	89.630	Callithrix_jacchus
ENSMUSG00000049960	Mrps16	99	62.687	ENSCAFG00000008928	-	98	61.194	Canis_familiaris
ENSMUSG00000049960	Mrps16	100	88.148	ENSCAFG00000031286	-	68	88.148	Canis_familiaris
ENSMUSG00000049960	Mrps16	81	87.273	ENSCAFG00020025503	-	95	82.645	Canis_lupus_dingo
ENSMUSG00000049960	Mrps16	99	86.466	ENSCAFG00020023773	-	99	86.466	Canis_lupus_dingo
ENSMUSG00000049960	Mrps16	98	61.654	ENSCHIG00000016255	-	78	69.159	Capra_hircus
ENSMUSG00000049960	Mrps16	97	69.466	ENSTSYG00000026797	-	95	68.702	Carlito_syrichta
ENSMUSG00000049960	Mrps16	98	67.424	ENSTSYG00000036920	-	79	81.111	Carlito_syrichta
ENSMUSG00000049960	Mrps16	100	91.852	ENSTSYG00000034400	-	100	91.852	Carlito_syrichta
ENSMUSG00000049960	Mrps16	99	67.910	ENSTSYG00000014457	-	100	67.910	Carlito_syrichta
ENSMUSG00000049960	Mrps16	96	76.923	ENSCAPG00000015053	MRPS16	100	76.923	Cavia_aperea
ENSMUSG00000049960	Mrps16	100	88.148	ENSCPOG00000025500	MRPS16	100	88.148	Cavia_porcellus
ENSMUSG00000049960	Mrps16	100	88.148	ENSCCAG00000037051	MRPS16	96	93.617	Cebus_capucinus
ENSMUSG00000049960	Mrps16	100	84.444	ENSCATG00000040457	MRPS16	99	84.444	Cercocebus_atys
ENSMUSG00000049960	Mrps16	100	88.148	ENSCLAG00000010443	MRPS16	100	88.148	Chinchilla_lanigera
ENSMUSG00000049960	Mrps16	100	85.926	ENSCSAG00000000413	-	99	85.926	Chlorocebus_sabaeus
ENSMUSG00000049960	Mrps16	100	85.185	ENSCSAG00000018977	-	99	85.185	Chlorocebus_sabaeus
ENSMUSG00000049960	Mrps16	100	85.185	ENSCSAG00000018976	-	99	85.185	Chlorocebus_sabaeus
ENSMUSG00000049960	Mrps16	99	86.466	ENSCHOG00000012520	MRPS16	100	86.466	Choloepus_hoffmanni
ENSMUSG00000049960	Mrps16	92	67.742	ENSCPBG00000022282	MRPS16	82	69.811	Chrysemys_picta_bellii
ENSMUSG00000049960	Mrps16	72	57.732	ENSCING00000024826	-	50	56.977	Ciona_intestinalis
ENSMUSG00000049960	Mrps16	86	51.724	ENSCSAVG00000006333	-	67	51.724	Ciona_savignyi
ENSMUSG00000049960	Mrps16	100	86.667	ENSCANG00000010568	MRPS16	99	86.667	Colobus_angolensis_palliatus
ENSMUSG00000049960	Mrps16	100	91.111	ENSCGRG00001023386	Mrps16	100	91.111	Cricetulus_griseus_chok1gshd
ENSMUSG00000049960	Mrps16	100	91.111	ENSCGRG00000002182	Mrps16	100	91.111	Cricetulus_griseus_crigri
ENSMUSG00000049960	Mrps16	99	58.824	ENSCSEG00000021662	mrps16	90	57.778	Cynoglossus_semilaevis
ENSMUSG00000049960	Mrps16	82	63.717	ENSCVAG00000012001	mrps16	99	56.618	Cyprinodon_variegatus
ENSMUSG00000049960	Mrps16	95	64.062	ENSDARG00000098972	mrps16	81	71.429	Danio_rerio
ENSMUSG00000049960	Mrps16	92	93.548	ENSDNOG00000047675	MRPS16	100	88.235	Dasypus_novemcinctus
ENSMUSG00000049960	Mrps16	67	79.121	ENSDORG00000023262	-	97	79.121	Dipodomys_ordii
ENSMUSG00000049960	Mrps16	100	91.852	ENSDORG00000008275	-	100	91.852	Dipodomys_ordii
ENSMUSG00000049960	Mrps16	82	50.450	FBgn0033907	mRpS16	64	54.217	Drosophila_melanogaster
ENSMUSG00000049960	Mrps16	84	53.097	ENSEBUG00000001088	mrps16	87	52.427	Eptatretus_burgeri
ENSMUSG00000049960	Mrps16	93	88.800	ENSEASG00005017192	MRPS16	95	88.800	Equus_asinus_asinus
ENSMUSG00000049960	Mrps16	93	88.800	ENSECAG00000009146	MRPS16	95	88.800	Equus_caballus
ENSMUSG00000049960	Mrps16	99	59.259	ENSELUG00000011609	mrps16	80	65.421	Esox_lucius
ENSMUSG00000049960	Mrps16	100	91.111	ENSFCAG00000037310	MRPS16	100	91.111	Felis_catus
ENSMUSG00000049960	Mrps16	79	60.748	ENSFALG00000009917	MRPS16	75	60.952	Ficedula_albicollis
ENSMUSG00000049960	Mrps16	93	91.270	ENSFDAG00000014014	MRPS16	98	90.299	Fukomys_damarensis
ENSMUSG00000049960	Mrps16	99	57.037	ENSFHEG00000022624	mrps16	78	63.551	Fundulus_heteroclitus
ENSMUSG00000049960	Mrps16	82	66.372	ENSGMOG00000001558	mrps16	83	66.355	Gadus_morhua
ENSMUSG00000049960	Mrps16	100	65.185	ENSGALG00000050621	MRPS16	99	65.185	Gallus_gallus
ENSMUSG00000049960	Mrps16	100	58.394	ENSGAFG00000012456	mrps16	78	66.355	Gambusia_affinis
ENSMUSG00000049960	Mrps16	98	57.857	ENSGACG00000001715	mrps16	79	66.355	Gasterosteus_aculeatus
ENSMUSG00000049960	Mrps16	92	70.968	ENSGAGG00000000097	-	74	74.528	Gopherus_agassizii
ENSMUSG00000049960	Mrps16	93	48.000	ENSGAGG00000005030	-	78	47.059	Gopherus_agassizii
ENSMUSG00000049960	Mrps16	100	91.111	ENSGGOG00000015055	MRPS16	99	91.111	Gorilla_gorilla
ENSMUSG00000049960	Mrps16	96	58.779	ENSHBUG00000015492	mrps16	79	67.290	Haplochromis_burtoni
ENSMUSG00000049960	Mrps16	100	91.111	ENSHGLG00000012797	MRPS16	100	91.111	Heterocephalus_glaber_female
ENSMUSG00000049960	Mrps16	100	91.111	ENSHGLG00100007890	MRPS16	100	91.111	Heterocephalus_glaber_male
ENSMUSG00000049960	Mrps16	78	63.551	ENSHCOG00000020173	mrps16	83	63.551	Hippocampus_comes
ENSMUSG00000049960	Mrps16	81	70.642	ENSIPUG00000003397	mrps16	99	61.654	Ictalurus_punctatus
ENSMUSG00000049960	Mrps16	100	89.630	ENSSTOG00000027184	MRPS16	100	89.630	Ictidomys_tridecemlineatus
ENSMUSG00000049960	Mrps16	100	88.148	ENSJJAG00000023255	Mrps16	100	88.148	Jaculus_jaculus
ENSMUSG00000049960	Mrps16	84	62.609	ENSKMAG00000009755	mrps16	78	64.486	Kryptolebias_marmoratus
ENSMUSG00000049960	Mrps16	97	57.143	ENSLBEG00000024661	mrps16	99	54.745	Labrus_bergylta
ENSMUSG00000049960	Mrps16	85	72.174	ENSLACG00000019160	MRPS16	96	66.412	Latimeria_chalumnae
ENSMUSG00000049960	Mrps16	99	62.963	ENSLOCG00000003927	mrps16	79	68.868	Lepisosteus_oculatus
ENSMUSG00000049960	Mrps16	96	81.538	ENSLAFG00000023124	MRPS16	99	81.538	Loxodonta_africana
ENSMUSG00000049960	Mrps16	100	84.444	ENSMFAG00000032103	MRPS16	99	84.444	Macaca_fascicularis
ENSMUSG00000049960	Mrps16	69	87.097	ENSMMUG00000011284	MRPS16	94	87.097	Macaca_mulatta
ENSMUSG00000049960	Mrps16	100	84.444	ENSMNEG00000041963	MRPS16	99	84.444	Macaca_nemestrina
ENSMUSG00000049960	Mrps16	100	84.444	ENSMLEG00000044343	MRPS16	99	84.444	Mandrillus_leucophaeus
ENSMUSG00000049960	Mrps16	98	59.701	ENSMAMG00000015181	mrps16	79	66.355	Mastacembelus_armatus
ENSMUSG00000049960	Mrps16	80	69.725	ENSMGAG00000000893	MRPS16	99	63.971	Meleagris_gallopavo
ENSMUSG00000049960	Mrps16	100	91.111	ENSMAUG00000010491	Mrps16	100	91.111	Mesocricetus_auratus
ENSMUSG00000049960	Mrps16	100	90.370	ENSMICG00000042573	MRPS16	100	90.370	Microcebus_murinus
ENSMUSG00000049960	Mrps16	100	88.148	ENSMOCG00000006927	Mrps16	100	88.148	Microtus_ochrogaster
ENSMUSG00000049960	Mrps16	85	61.538	ENSMMOG00000010770	mrps16	99	55.556	Mola_mola
ENSMUSG00000049960	Mrps16	94	70.866	ENSMODG00000000168	MRPS16	96	70.866	Monodelphis_domestica
ENSMUSG00000049960	Mrps16	82	62.832	ENSMALG00000007222	mrps16	76	62.617	Monopterus_albus
ENSMUSG00000049960	Mrps16	100	98.519	MGP_CAROLIEiJ_G0018987	Mrps16	100	98.519	Mus_caroli
ENSMUSG00000049960	Mrps16	92	94.355	MGP_PahariEiJ_G0030001	Mrps16	100	94.074	Mus_pahari
ENSMUSG00000049960	Mrps16	100	97.778	MGP_SPRETEiJ_G0019865	Mrps16	100	97.778	Mus_spretus
ENSMUSG00000049960	Mrps16	99	88.806	ENSMPUG00000003777	MRPS16	86	89.474	Mustela_putorius_furo
ENSMUSG00000049960	Mrps16	92	87.903	ENSMLUG00000022951	MRPS16	100	86.667	Myotis_lucifugus
ENSMUSG00000049960	Mrps16	99	86.667	ENSNGAG00000019881	Mrps16	99	80.000	Nannospalax_galili
ENSMUSG00000049960	Mrps16	81	67.568	ENSNBRG00000020914	mrps16	79	66.667	Neolamprologus_brichardi
ENSMUSG00000049960	Mrps16	100	71.852	ENSNLEG00000029922	-	96	71.852	Nomascus_leucogenys
ENSMUSG00000049960	Mrps16	100	91.111	ENSNLEG00000016597	-	99	91.111	Nomascus_leucogenys
ENSMUSG00000049960	Mrps16	100	89.630	ENSNLEG00000018904	-	99	89.630	Nomascus_leucogenys
ENSMUSG00000049960	Mrps16	90	74.590	ENSMEUG00000008644	MRPS16	100	74.590	Notamacropus_eugenii
ENSMUSG00000049960	Mrps16	97	86.260	ENSOPRG00000018616	MRPS16	100	86.260	Ochotona_princeps
ENSMUSG00000049960	Mrps16	100	88.148	ENSODEG00000019541	-	100	88.148	Octodon_degus
ENSMUSG00000049960	Mrps16	55	90.541	ENSODEG00000013980	-	93	90.541	Octodon_degus
ENSMUSG00000049960	Mrps16	94	59.690	ENSONIG00000014282	mrps16	78	67.619	Oreochromis_niloticus
ENSMUSG00000049960	Mrps16	100	72.593	ENSOANG00000012378	MRPS16	99	72.593	Ornithorhynchus_anatinus
ENSMUSG00000049960	Mrps16	100	88.148	ENSOCUG00000023231	-	100	88.148	Oryctolagus_cuniculus
ENSMUSG00000049960	Mrps16	100	84.444	ENSOCUG00000024223	-	100	84.444	Oryctolagus_cuniculus
ENSMUSG00000049960	Mrps16	99	58.519	ENSORLG00000022084	mrps16	78	65.421	Oryzias_latipes
ENSMUSG00000049960	Mrps16	82	64.602	ENSORLG00020019793	mrps16	77	65.094	Oryzias_latipes_hni
ENSMUSG00000049960	Mrps16	82	65.487	ENSORLG00015015664	mrps16	78	64.815	Oryzias_latipes_hsok
ENSMUSG00000049960	Mrps16	99	61.481	ENSOMEG00000021490	mrps16	99	56.296	Oryzias_melastigma
ENSMUSG00000049960	Mrps16	100	91.852	ENSOGAG00000033867	MRPS16	99	91.852	Otolemur_garnettii
ENSMUSG00000049960	Mrps16	99	90.226	ENSOARG00000007548	MRPS16	86	90.226	Ovis_aries
ENSMUSG00000049960	Mrps16	100	91.111	ENSPPAG00000009406	MRPS16	99	91.111	Pan_paniscus
ENSMUSG00000049960	Mrps16	100	91.111	ENSPPRG00000024759	MRPS16	100	91.111	Panthera_pardus
ENSMUSG00000049960	Mrps16	100	91.111	ENSPTIG00000021428	MRPS16	100	91.111	Panthera_tigris_altaica
ENSMUSG00000049960	Mrps16	100	91.111	ENSPTRG00000002627	MRPS16	99	91.111	Pan_troglodytes
ENSMUSG00000049960	Mrps16	81	80.909	ENSPTRG00000044912	-	96	80.189	Pan_troglodytes
ENSMUSG00000049960	Mrps16	100	83.704	ENSPANG00000022374	MRPS16	99	83.704	Papio_anubis
ENSMUSG00000049960	Mrps16	99	60.902	ENSPKIG00000013816	mrps16	76	67.619	Paramormyrops_kingsleyae
ENSMUSG00000049960	Mrps16	92	66.935	ENSPSIG00000005589	MRPS16	75	67.925	Pelodiscus_sinensis
ENSMUSG00000049960	Mrps16	95	60.000	ENSPMGG00000013450	mrps16	83	65.421	Periophthalmus_magnuspinnatus
ENSMUSG00000049960	Mrps16	100	89.630	ENSPEMG00000021378	Mrps16	100	89.630	Peromyscus_maniculatus_bairdii
ENSMUSG00000049960	Mrps16	96	73.643	ENSPCIG00000015166	MRPS16	98	73.643	Phascolarctos_cinereus
ENSMUSG00000049960	Mrps16	99	61.481	ENSPFOG00000014130	mrps16	78	67.290	Poecilia_formosa
ENSMUSG00000049960	Mrps16	99	61.481	ENSPLAG00000018686	mrps16	78	67.290	Poecilia_latipinna
ENSMUSG00000049960	Mrps16	99	61.481	ENSPMEG00000009648	mrps16	78	67.290	Poecilia_mexicana
ENSMUSG00000049960	Mrps16	100	58.394	ENSPREG00000005800	mrps16	78	66.355	Poecilia_reticulata
ENSMUSG00000049960	Mrps16	100	88.889	ENSPCOG00000009898	MRPS16	100	88.889	Propithecus_coquereli
ENSMUSG00000049960	Mrps16	99	87.218	ENSPVAG00000012996	MRPS16	100	87.218	Pteropus_vampyrus
ENSMUSG00000049960	Mrps16	96	58.779	ENSPNYG00000018439	mrps16	79	67.290	Pundamilia_nyererei
ENSMUSG00000049960	Mrps16	99	63.158	ENSPNAG00000027291	mrps16	99	62.406	Pygocentrus_nattereri
ENSMUSG00000049960	Mrps16	100	94.074	ENSRNOG00000006898	Mrps16	100	94.074	Rattus_norvegicus
ENSMUSG00000049960	Mrps16	100	87.407	ENSRBIG00000037015	MRPS16	99	87.407	Rhinopithecus_bieti
ENSMUSG00000049960	Mrps16	100	87.407	ENSRROG00000040939	MRPS16	99	87.407	Rhinopithecus_roxellana
ENSMUSG00000049960	Mrps16	100	89.630	ENSSBOG00000016492	MRPS16	94	95.699	Saimiri_boliviensis_boliviensis
ENSMUSG00000049960	Mrps16	96	68.992	ENSSHAG00000003006	MRPS16	96	68.992	Sarcophilus_harrisii
ENSMUSG00000049960	Mrps16	84	69.027	ENSSFOG00015007264	mrps16	100	60.145	Scleropages_formosus
ENSMUSG00000049960	Mrps16	98	59.701	ENSSMAG00000014748	mrps16	99	57.778	Scophthalmus_maximus
ENSMUSG00000049960	Mrps16	92	60.448	ENSSDUG00000015177	mrps16	78	66.355	Seriola_dumerili
ENSMUSG00000049960	Mrps16	92	60.448	ENSSLDG00000004507	mrps16	78	66.355	Seriola_lalandi_dorsalis
ENSMUSG00000049960	Mrps16	100	59.559	ENSSPUG00000012312	MRPS16	99	59.559	Sphenodon_punctatus
ENSMUSG00000049960	Mrps16	99	58.824	ENSSPAG00000007520	mrps16	99	59.259	Stegastes_partitus
ENSMUSG00000049960	Mrps16	78	65.421	ENSTRUG00000021325	mrps16	99	56.296	Takifugu_rubripes
ENSMUSG00000049960	Mrps16	84	66.087	ENSTNIG00000014796	MRPS16	78	67.290	Tetraodon_nigroviridis
ENSMUSG00000049960	Mrps16	84	66.087	ENSTNIG00000006736	mrps16	78	67.290	Tetraodon_nigroviridis
ENSMUSG00000049960	Mrps16	95	89.844	ENSTTRG00000000825	MRPS16	100	89.844	Tursiops_truncatus
ENSMUSG00000049960	Mrps16	100	87.407	ENSUAMG00000005153	MRPS16	100	87.407	Ursus_americanus
ENSMUSG00000049960	Mrps16	100	87.407	ENSUMAG00000009089	MRPS16	100	87.407	Ursus_maritimus
ENSMUSG00000049960	Mrps16	94	89.764	ENSVPAG00000007263	MRPS16	99	89.764	Vicugna_pacos
ENSMUSG00000049960	Mrps16	99	86.466	ENSVVUG00000022733	-	99	86.466	Vulpes_vulpes
ENSMUSG00000049960	Mrps16	61	90.244	ENSVVUG00000005415	-	89	77.228	Vulpes_vulpes
ENSMUSG00000049960	Mrps16	99	61.940	ENSXETG00000001399	mrps16	75	69.811	Xenopus_tropicalis
ENSMUSG00000049960	Mrps16	90	61.290	ENSXCOG00000008280	mrps16	76	69.792	Xiphophorus_couchianus
ENSMUSG00000049960	Mrps16	99	59.259	ENSXMAG00000000052	mrps16	80	66.355	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	11402041.	ISS	Function
GO:0005739	mitochondrion	14651853.18614015.	HDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005763	mitochondrial small ribosomal subunit	21873635.	IBA	Component
GO:0005763	mitochondrial small ribosomal subunit	-	ISO	Component
GO:0005763	mitochondrial small ribosomal subunit	11402041.	ISS	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	-	IEA	Process
GO:0032543	mitochondrial translation	11402041.	ISS	Process