EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000050335 (Gene tree)
Gene ID: 16854
Gene Symbol: Lgals3
Alias: L-34|Mac-2|gal3|galectin-3
Full Name: lectin%2C galactose binding%2C soluble 3
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 18410
Position: chr14: 47367751-47386160
Accession: 96778
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000146468	-	1072	-	ENSMUSP00000119275	264 (aa)	-	Q8C253
ENSMUST00000144794	-	368	-	ENSMUSP00000114177	94 (aa)	-	D3YVT4
ENSMUST00000151405	-	646	-	ENSMUSP00000118660	139 (aa)	-	D3YZJ2
ENSMUST00000142734	-	1419	-	ENSMUSP00000118169	264 (aa)	-	Q8C253
ENSMUST00000150290	-	1298	-	ENSMUSP00000114350	264 (aa)	-	Q8C253
ENSMUST00000226585	-	210	-	ENSMUSP00000154551	32 (aa)	-	A0A2I3BRE5

Gene Model

Click here to download ENSMUSG00000050335's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000050335's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000050335	Lgals3	94	86.667	ENSG00000131981	LGALS3	100	82.222	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001501	skeletal system development	15800063.	IGI	Process
GO:0001772	immunological synapse	19706535.	IDA	Component
GO:0001772	immunological synapse	-	ISO	Component
GO:0002376	immune system process	-	IEA	Process
GO:0002548	monocyte chemotaxis	-	ISO	Process
GO:0005515	protein binding	10745073.11856751.14611647.29427412.	IPI	Function
GO:0005576	extracellular region	-	IEA	Component
GO:0005615	extracellular space	24006456.	HDA	Component
GO:0005615	extracellular space	-	ISO	Component
GO:0005634	nucleus	10745073.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005681	spliceosomal complex	-	IEA	Component
GO:0005737	cytoplasm	10745073.11856751.	IDA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005743	mitochondrial inner membrane	-	ISO	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0008284	positive regulation of cell proliferation	-	ISO	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0009897	external side of plasma membrane	23460747.	IDA	Component
GO:0009986	cell surface	23576987.	IDA	Component
GO:0009986	cell surface	-	ISO	Component
GO:0014064	positive regulation of serotonin secretion	-	ISO	Process
GO:0019863	IgE binding	-	ISO	Function
GO:0019903	protein phosphatase binding	-	ISO	Function
GO:0030154	cell differentiation	-	IEA	Process
GO:0030198	extracellular matrix organization	15800063.	IGI	Process
GO:0030246	carbohydrate binding	-	IEA	Function
GO:0030593	neutrophil chemotaxis	-	ISO	Process
GO:0031012	extracellular matrix	15800063.	IDA	Component
GO:0034988	Fc-gamma receptor I complex binding	-	ISO	Function
GO:0042056	chemoattractant activity	-	ISO	Function
GO:0042129	regulation of T cell proliferation	-	ISO	Process
GO:0043066	negative regulation of apoptotic process	-	ISO	Process
GO:0043236	laminin binding	-	ISO	Function
GO:0045087	innate immune response	-	IEA	Process
GO:0045185	maintenance of protein location	21670307.	IDA	Process
GO:0045766	positive regulation of angiogenesis	-	ISO	Process
GO:0045806	negative regulation of endocytosis	19706535.	IMP	Process
GO:0045806	negative regulation of endocytosis	-	ISO	Process
GO:0048029	monosaccharide binding	-	ISO	Function
GO:0048030	disaccharide binding	-	ISO	Function
GO:0048245	eosinophil chemotaxis	-	ISO	Process
GO:0048246	macrophage chemotaxis	-	ISO	Process
GO:0050785	advanced glycation end-product receptor activity	-	ISO	Function
GO:0050860	negative regulation of T cell receptor signaling pathway	19706535.	IMP	Process
GO:0050918	positive chemotaxis	-	ISO	Process
GO:0062023	collagen-containing extracellular matrix	22159717.	HDA	Component
GO:0070232	regulation of T cell apoptotic process	-	ISO	Process
GO:0071674	mononuclear cell migration	-	ISO	Process
GO:0071677	positive regulation of mononuclear cell migration	-	ISO	Process
GO:0090073	positive regulation of protein homodimerization activity	-	ISO	Process
GO:0090280	positive regulation of calcium ion import	-	ISO	Process
GO:0097386	glial cell projection	20826656.	IDA	Component
GO:1902041	regulation of extrinsic apoptotic signaling pathway via death domain receptors	-	ISO	Process
GO:1903078	positive regulation of protein localization to plasma membrane	-	ISO	Process
GO:1903769	negative regulation of cell proliferation in bone marrow	-	ISO	Process
GO:2000521	negative regulation of immunological synapse formation	19706535.	IMP	Process
GO:2001189	negative regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell	19706535.	IMP	Process
GO:2001237	negative regulation of extrinsic apoptotic signaling pathway	-	ISO	Process