EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000050379 (Gene tree)
Gene ID: 56526
Gene Symbol: Sept6
Alias: 2810035H17Rik|C920001C06Rik
Full Name: septin 6
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 80469 bases
Position: chrX:36911326-36991794
Accession: 1888939
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000054034	MMR_HSR1	PF01926.23	8.6e-05	1	1
ENSMUSP00000062014	MMR_HSR1	PF01926.23	8.7e-05	1	1
ENSMUSP00000110894	MMR_HSR1	PF01926.23	8.7e-05	1	1
ENSMUSP00000116670	MMR_HSR1	PF01926.23	0.00028	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000115239	-	1845	XM_006541388	ENSMUSP00000110894	434 (aa)	XP_006541451	Q9R1T4
ENSMUST00000152291	-	530	-	ENSMUSP00000116670	141 (aa)	-	A2A3W1
ENSMUST00000060474	-	3457	XM_017318580	ENSMUSP00000062014	429 (aa)	-	Q9R1T4
ENSMUST00000053456	-	4673	XM_006541389	ENSMUSP00000054034	427 (aa)	XP_006541452	Q9R1T4
ENSMUST00000128766	-	3389	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000050379's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu05100	Bacterial invasion of epithelial cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000050379's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000050379	Sept6	68	42.088	ENSMUSG00000022456	Sept3	88	42.088
ENSMUSG00000050379	Sept6	69	43.234	ENSMUSG00000116048	Sept2	93	40.594
ENSMUSG00000050379	Sept6	100	82.028	ENSMUSG00000058013	Sept11	100	82.201
ENSMUSG00000050379	Sept6	67	41.176	ENSMUSG00000022542	Sept12	92	38.077
ENSMUSG00000050379	Sept6	100	70.023	ENSMUSG00000019917	Sept10	100	69.374
ENSMUSG00000050379	Sept6	67	43.390	ENSMUSG00000020486	Sept4	93	43.390
ENSMUSG00000050379	Sept6	99	36.552	ENSMUSG00000059248	Sept9	87	43.836
ENSMUSG00000050379	Sept6	76	41.791	ENSMUSG00000072214	Sept5	99	40.945
ENSMUSG00000050379	Sept6	76	41.349	ENSMUSG00000000486	Sept1	100	40.136
ENSMUSG00000050379	Sept6	97	40.610	ENSMUSG00000001833	Sept7	95	39.906
ENSMUSG00000050379	Sept6	68	43.813	ENSMUSG00000116594	AC133488.1	81	43.813
ENSMUSG00000050379	Sept6	100	76.690	ENSMUSG00000018398	Sept8	100	76.690
ENSMUSG00000050379	Sept6	69	43.234	ENSMUSG00000026276	Sept2	100	41.284

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000050379	Sept6	100	96.270	ENSG00000125354	SEPT6	100	96.270	Homo_sapiens
ENSMUSG00000050379	Sept6	100	89.227	ENSAPOG00000000347	sept6	100	89.227	Acanthochromis_polyacanthus
ENSMUSG00000050379	Sept6	73	97.087	ENSAMEG00000000156	SEPT6	93	97.087	Ailuropoda_melanoleuca
ENSMUSG00000050379	Sept6	99	89.202	ENSACIG00000013682	sept6	99	89.202	Amphilophus_citrinellus
ENSMUSG00000050379	Sept6	100	89.227	ENSAOCG00000011293	sept6	100	89.227	Amphiprion_ocellaris
ENSMUSG00000050379	Sept6	100	89.227	ENSAPEG00000005460	sept6	100	89.227	Amphiprion_percula
ENSMUSG00000050379	Sept6	100	88.759	ENSATEG00000018814	sept6	100	88.759	Anabas_testudineus
ENSMUSG00000050379	Sept6	100	96.270	ENSANAG00000033580	SEPT6	100	96.270	Aotus_nancymaae
ENSMUSG00000050379	Sept6	100	88.993	ENSACLG00000001734	sept6	100	88.993	Astatotilapia_calliptera
ENSMUSG00000050379	Sept6	100	89.044	ENSAMXG00000033660	sept6	100	89.044	Astyanax_mexicanus
ENSMUSG00000050379	Sept6	100	96.270	ENSCJAG00000005022	SEPT6	100	96.270	Callithrix_jacchus
ENSMUSG00000050379	Sept6	100	89.044	ENSCCAG00000023266	SEPT6	100	89.044	Cebus_capucinus
ENSMUSG00000050379	Sept6	100	96.270	ENSCATG00000036060	SEPT6	100	96.270	Cercocebus_atys
ENSMUSG00000050379	Sept6	100	96.253	ENSCSAG00000018351	SEPT6	100	96.253	Chlorocebus_sabaeus
ENSMUSG00000050379	Sept6	100	96.270	ENSCANG00000016430	SEPT6	100	96.270	Colobus_angolensis_palliatus
ENSMUSG00000050379	Sept6	100	97.424	ENSCGRG00001014207	Sept6	100	97.424	Cricetulus_griseus_chok1gshd
ENSMUSG00000050379	Sept6	99	96.200	ENSCGRG00000007825	Sept6	100	96.897	Cricetulus_griseus_crigri
ENSMUSG00000050379	Sept6	100	88.290	ENSCSEG00000002026	sept6	94	88.290	Cynoglossus_semilaevis
ENSMUSG00000050379	Sept6	100	88.993	ENSCVAG00000004959	sept6	100	88.993	Cyprinodon_variegatus
ENSMUSG00000050379	Sept6	100	89.461	ENSDARG00000010721	sept6	99	89.461	Danio_rerio
ENSMUSG00000050379	Sept6	100	89.227	ENSELUG00000020499	sept6	96	89.227	Esox_lucius
ENSMUSG00000050379	Sept6	100	95.785	ENSFCAG00000008744	SEPT6	100	95.785	Felis_catus
ENSMUSG00000050379	Sept6	100	95.105	ENSFDAG00000002473	SEPT6	100	95.105	Fukomys_damarensis
ENSMUSG00000050379	Sept6	100	88.993	ENSFHEG00000017987	sept6	100	88.993	Fundulus_heteroclitus
ENSMUSG00000050379	Sept6	100	88.056	ENSGMOG00000001671	sept6	100	88.018	Gadus_morhua
ENSMUSG00000050379	Sept6	100	88.993	ENSGAFG00000000922	sept6	100	88.993	Gambusia_affinis
ENSMUSG00000050379	Sept6	100	88.759	ENSGACG00000017441	sept6	100	88.710	Gasterosteus_aculeatus
ENSMUSG00000050379	Sept6	100	96.270	ENSGGOG00000009733	SEPT6	100	96.270	Gorilla_gorilla
ENSMUSG00000050379	Sept6	100	88.993	ENSHBUG00000017506	sept6	100	88.993	Haplochromis_burtoni
ENSMUSG00000050379	Sept6	100	89.277	ENSHCOG00000017047	sept6	100	89.277	Hippocampus_comes
ENSMUSG00000050379	Sept6	100	89.977	ENSIPUG00000019317	sept6	85	89.977	Ictalurus_punctatus
ENSMUSG00000050379	Sept6	100	97.436	ENSJJAG00000020412	Sept6	100	97.436	Jaculus_jaculus
ENSMUSG00000050379	Sept6	100	88.811	ENSKMAG00000020207	sept6	100	88.811	Kryptolebias_marmoratus
ENSMUSG00000050379	Sept6	100	89.277	ENSLBEG00000028683	sept6	95	89.277	Labrus_bergylta
ENSMUSG00000050379	Sept6	100	89.930	ENSLOCG00000015233	sept6	100	91.022	Lepisosteus_oculatus
ENSMUSG00000050379	Sept6	100	96.270	ENSMFAG00000003084	SEPT6	100	96.270	Macaca_fascicularis
ENSMUSG00000050379	Sept6	100	96.270	ENSMMUG00000017669	SEPT6	100	96.270	Macaca_mulatta
ENSMUSG00000050379	Sept6	100	96.270	ENSMNEG00000026932	SEPT6	100	96.270	Macaca_nemestrina
ENSMUSG00000050379	Sept6	100	96.270	ENSMLEG00000030428	SEPT6	100	96.270	Mandrillus_leucophaeus
ENSMUSG00000050379	Sept6	100	89.227	ENSMAMG00000019988	sept6	100	89.227	Mastacembelus_armatus
ENSMUSG00000050379	Sept6	100	88.993	ENSMZEG00005007935	sept6	89	88.993	Maylandia_zebra
ENSMUSG00000050379	Sept6	100	97.203	ENSMAUG00000018038	Sept6	100	97.203	Mesocricetus_auratus
ENSMUSG00000050379	Sept6	98	97.381	ENSMOCG00000000500	Sept6	99	97.596	Microtus_ochrogaster
ENSMUSG00000050379	Sept6	97	89.855	ENSMMOG00000004176	sept6	97	89.855	Mola_mola
ENSMUSG00000050379	Sept6	100	88.290	ENSMALG00000007921	sept6	100	88.290	Monopterus_albus
ENSMUSG00000050379	Sept6	100	100.000	MGP_CAROLIEiJ_G0032996	Sept6	100	100.000	Mus_caroli
ENSMUSG00000050379	Sept6	80	99.115	MGP_PahariEiJ_G0031540	-	71	98.099	Mus_pahari
ENSMUSG00000050379	Sept6	100	100.000	MGP_SPRETEiJ_G0034149	Sept6	100	100.000	Mus_spretus
ENSMUSG00000050379	Sept6	97	95.433	ENSMLUG00000005623	SEPT6	95	95.433	Myotis_lucifugus
ENSMUSG00000050379	Sept6	100	96.737	ENSNGAG00000010702	Sept6	100	96.737	Nannospalax_galili
ENSMUSG00000050379	Sept6	99	81.221	ENSNBRG00000011675	sept6	99	81.221	Neolamprologus_brichardi
ENSMUSG00000050379	Sept6	100	96.270	ENSNLEG00000014873	SEPT6	100	96.270	Nomascus_leucogenys
ENSMUSG00000050379	Sept6	100	88.993	ENSONIG00000002528	sept6	99	88.993	Oreochromis_niloticus
ENSMUSG00000050379	Sept6	100	88.759	ENSORLG00000000997	sept6	100	90.000	Oryzias_latipes
ENSMUSG00000050379	Sept6	100	88.759	ENSORLG00020003886	sept6	100	88.759	Oryzias_latipes_hni
ENSMUSG00000050379	Sept6	100	88.759	ENSORLG00015013025	sept6	100	88.759	Oryzias_latipes_hsok
ENSMUSG00000050379	Sept6	100	87.354	ENSOMEG00000014650	sept6	100	87.354	Oryzias_melastigma
ENSMUSG00000050379	Sept6	100	96.270	ENSPPAG00000040865	SEPT6	100	96.270	Pan_paniscus
ENSMUSG00000050379	Sept6	100	95.550	ENSPPRG00000023588	SEPT6	100	95.550	Panthera_pardus
ENSMUSG00000050379	Sept6	96	82.482	ENSPTIG00000015338	SEPT6	99	82.482	Panthera_tigris_altaica
ENSMUSG00000050379	Sept6	100	96.037	ENSPTRG00000022227	SEPT6	100	96.037	Pan_troglodytes
ENSMUSG00000050379	Sept6	100	96.270	ENSPANG00000000899	SEPT6	100	96.270	Papio_anubis
ENSMUSG00000050379	Sept6	100	86.014	ENSPKIG00000019114	sept6	100	86.014	Paramormyrops_kingsleyae
ENSMUSG00000050379	Sept6	99	90.845	ENSPKIG00000013948	SEPT6	100	92.000	Paramormyrops_kingsleyae
ENSMUSG00000050379	Sept6	98	88.810	ENSPMGG00000012133	sept6	100	87.793	Periophthalmus_magnuspinnatus
ENSMUSG00000050379	Sept6	100	97.436	ENSPEMG00000016450	Sept6	100	97.436	Peromyscus_maniculatus_bairdii
ENSMUSG00000050379	Sept6	100	91.608	ENSPCIG00000028910	SEPT6	100	91.608	Phascolarctos_cinereus
ENSMUSG00000050379	Sept6	98	89.549	ENSPFOG00000024721	sept6	97	89.549	Poecilia_formosa
ENSMUSG00000050379	Sept6	100	88.993	ENSPLAG00000019878	sept6	100	88.993	Poecilia_latipinna
ENSMUSG00000050379	Sept6	73	85.437	ENSPLAG00000005147	sept6	93	87.556	Poecilia_latipinna
ENSMUSG00000050379	Sept6	100	88.993	ENSPMEG00000023470	sept6	100	88.993	Poecilia_mexicana
ENSMUSG00000050379	Sept6	100	88.759	ENSPREG00000012310	sept6	100	88.759	Poecilia_reticulata
ENSMUSG00000050379	Sept6	100	94.379	ENSPPYG00000020673	SEPT6	100	94.379	Pongo_abelii
ENSMUSG00000050379	Sept6	100	89.044	ENSPNYG00000009709	sept6	100	90.250	Pundamilia_nyererei
ENSMUSG00000050379	Sept6	100	89.977	ENSPNAG00000021638	sept6	100	89.977	Pygocentrus_nattereri
ENSMUSG00000050379	Sept6	100	96.270	ENSRBIG00000044672	SEPT6	100	96.270	Rhinopithecus_bieti
ENSMUSG00000050379	Sept6	100	96.270	ENSRROG00000038667	SEPT6	100	96.270	Rhinopithecus_roxellana
ENSMUSG00000050379	Sept6	100	96.037	ENSSBOG00000024143	SEPT6	100	96.037	Saimiri_boliviensis_boliviensis
ENSMUSG00000050379	Sept6	99	91.059	ENSSHAG00000007460	SEPT6	98	91.059	Sarcophilus_harrisii
ENSMUSG00000050379	Sept6	100	87.588	ENSSFOG00015005477	sept6	100	87.588	Scleropages_formosus
ENSMUSG00000050379	Sept6	100	89.277	ENSSFOG00015010832	SEPT6	100	89.277	Scleropages_formosus
ENSMUSG00000050379	Sept6	100	88.759	ENSSMAG00000012785	sept6	100	88.759	Scophthalmus_maximus
ENSMUSG00000050379	Sept6	100	89.227	ENSSDUG00000005575	sept6	100	89.227	Seriola_dumerili
ENSMUSG00000050379	Sept6	100	89.277	ENSSLDG00000003277	sept6	100	89.277	Seriola_lalandi_dorsalis
ENSMUSG00000050379	Sept6	100	89.227	ENSSPAG00000010108	sept6	100	89.227	Stegastes_partitus
ENSMUSG00000050379	Sept6	100	88.525	ENSTRUG00000010830	sept6	100	89.552	Takifugu_rubripes
ENSMUSG00000050379	Sept6	100	87.119	ENSTNIG00000015761	sept6	99	87.119	Tetraodon_nigroviridis
ENSMUSG00000050379	Sept6	74	83.810	ENSXCOG00000016712	sept6	89	84.615	Xiphophorus_couchianus
ENSMUSG00000050379	Sept6	100	89.044	ENSXMAG00000013699	sept6	100	89.044	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000775	chromosome, centromeric region	-	IEA	Component
GO:0000776	kinetochore	-	IEA	Component
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0005515	protein binding	18809578.24113571.	IPI	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005694	chromosome	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0005929	cilium	-	IEA	Component
GO:0005940	septin ring	21873635.	IBA	Component
GO:0005940	septin ring	22232702.	IDA	Component
GO:0007049	cell cycle	-	IEA	Process
GO:0007283	spermatogenesis	-	IEA	Process
GO:0008021	synaptic vesicle	11064363.	IDA	Component
GO:0015630	microtubule cytoskeleton	21873635.	IBA	Component
GO:0030154	cell differentiation	-	IEA	Process
GO:0031105	septin complex	21873635.	IBA	Component
GO:0031105	septin complex	18809578.	IDA	Component
GO:0031105	septin complex	-	ISO	Component
GO:0031514	motile cilium	-	IEA	Component
GO:0032154	cleavage furrow	22232702.	IDA	Component
GO:0032173	septin collar	22232702.	IDA	Component
GO:0042995	cell projection	-	IEA	Component
GO:0043679	axon terminus	11064363.	IDA	Component
GO:0051301	cell division	-	IEA	Process
GO:0060090	molecular adaptor activity	21873635.	IBA	Function
GO:0060271	cilium assembly	21873635.	IBA	Process
GO:0061640	cytoskeleton-dependent cytokinesis	21873635.	IBA	Process
GO:0097227	sperm annulus	-	ISO	Component
GO:0098793	presynapse	11064363.	IDA	Component