EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000051169 (Gene tree)
Gene ID: 101122
Gene Symbol: Rpusd3
Alias: -
Full Name: RNA pseudouridylate synthase domain containing 3
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 4022 bases
Position: chr6:113415319-113419340
Accession: 2141440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000120250	PseudoU_synth_2	PF00849.22	4.7e-18	1	1
ENSMUSP00000120380	PseudoU_synth_2	PF00849.22	6.9e-18	1	1
ENSMUSP00000108715	PseudoU_synth_2	PF00849.22	8.6e-18	1	1
ENSMUSP00000059057	PseudoU_synth_2	PF00849.22	3.2e-14	1	1
ENSMUSP00000115950	PseudoU_synth_2	PF00849.22	1.5e-06	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000134853	-	522	-	-	- (aa)	-	-
ENSMUST00000151618	-	549	-	ENSMUSP00000115950	183 (aa)	-	F6UDW0
ENSMUST00000129047	-	1045	-	ENSMUSP00000120380	315 (aa)	-	Q14AI6
ENSMUST00000203758	-	321	-	-	- (aa)	-	-
ENSMUST00000060634	-	1224	XM_006505227	ENSMUSP00000059057	279 (aa)	XP_006505290	B7ZMQ0
ENSMUST00000124078	-	782	-	-	- (aa)	-	-
ENSMUST00000150452	-	752	-	-	- (aa)	-	-
ENSMUST00000129560	-	365	-	ENSMUSP00000114511	117 (aa)	-	D3YVC8
ENSMUST00000113092	-	1269	-	ENSMUSP00000108715	344 (aa)	-	Q14AI6
ENSMUST00000147726	-	805	-	ENSMUSP00000120250	269 (aa)	-	F6WLR1

Gene Model

Click here to download ENSMUSG00000051169's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000051169's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000051169	Rpusd3	78	34.752	ENSMUSG00000032044	Rpusd4	70	34.043

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000051169	Rpusd3	100	72.674	ENSG00000156990	RPUSD3	98	72.674	Homo_sapiens
ENSMUSG00000051169	Rpusd3	100	72.093	ENSAMEG00000016227	RPUSD3	98	72.093	Ailuropoda_melanoleuca
ENSMUSG00000051169	Rpusd3	81	55.046	ENSACAG00000009836	RPUSD3	80	53.381	Anolis_carolinensis
ENSMUSG00000051169	Rpusd3	69	75.269	ENSANAG00000019945	-	77	72.917	Aotus_nancymaae
ENSMUSG00000051169	Rpusd3	70	71.809	ENSANAG00000038118	-	90	71.809	Aotus_nancymaae
ENSMUSG00000051169	Rpusd3	93	50.558	ENSANAG00000007127	-	95	51.613	Aotus_nancymaae
ENSMUSG00000051169	Rpusd3	100	72.674	ENSBTAG00000007968	RPUSD3	100	72.674	Bos_taurus
ENSMUSG00000051169	Rpusd3	100	71.221	ENSCAFG00000029733	RPUSD3	98	71.221	Canis_familiaris
ENSMUSG00000051169	Rpusd3	100	71.221	ENSCAFG00020008582	RPUSD3	98	71.221	Canis_lupus_dingo
ENSMUSG00000051169	Rpusd3	99	74.157	ENSCHIG00000026027	RPUSD3	100	72.093	Capra_hircus
ENSMUSG00000051169	Rpusd3	96	69.254	ENSTSYG00000009994	RPUSD3	95	69.254	Carlito_syrichta
ENSMUSG00000051169	Rpusd3	74	77.889	ENSCAPG00000017559	RPUSD3	99	74.525	Cavia_aperea
ENSMUSG00000051169	Rpusd3	96	67.829	ENSCPOG00000037956	RPUSD3	90	63.557	Cavia_porcellus
ENSMUSG00000051169	Rpusd3	98	72.997	ENSCCAG00000029530	RPUSD3	97	72.997	Cebus_capucinus
ENSMUSG00000051169	Rpusd3	100	72.965	ENSCATG00000036939	RPUSD3	98	72.965	Cercocebus_atys
ENSMUSG00000051169	Rpusd3	100	73.256	ENSCSAG00000010506	RPUSD3	98	73.256	Chlorocebus_sabaeus
ENSMUSG00000051169	Rpusd3	51	76.190	ENSCHOG00000010151	-	67	76.190	Choloepus_hoffmanni
ENSMUSG00000051169	Rpusd3	72	54.872	ENSCPBG00000008825	RPUSD3	95	53.696	Chrysemys_picta_bellii
ENSMUSG00000051169	Rpusd3	100	72.965	ENSCANG00000040711	RPUSD3	98	72.965	Colobus_angolensis_palliatus
ENSMUSG00000051169	Rpusd3	100	84.593	ENSCGRG00001004923	Rpusd3	95	84.593	Cricetulus_griseus_chok1gshd
ENSMUSG00000051169	Rpusd3	100	84.593	ENSCGRG00000018315	Rpusd3	100	84.593	Cricetulus_griseus_crigri
ENSMUSG00000051169	Rpusd3	99	70.554	ENSDNOG00000039160	RPUSD3	91	70.554	Dasypus_novemcinctus
ENSMUSG00000051169	Rpusd3	76	74.532	ENSDORG00000026827	Rpusd3	92	74.532	Dipodomys_ordii
ENSMUSG00000051169	Rpusd3	97	68.358	ENSETEG00000006538	RPUSD3	95	68.358	Echinops_telfairi
ENSMUSG00000051169	Rpusd3	74	38.119	ENSEBUG00000015605	RPUSD3	65	38.119	Eptatretus_burgeri
ENSMUSG00000051169	Rpusd3	100	73.547	ENSEASG00005014160	RPUSD3	96	73.547	Equus_asinus_asinus
ENSMUSG00000051169	Rpusd3	100	74.128	ENSECAG00000019988	RPUSD3	96	74.128	Equus_caballus
ENSMUSG00000051169	Rpusd3	95	54.955	ENSEEUG00000007353	RPUSD3	94	54.955	Erinaceus_europaeus
ENSMUSG00000051169	Rpusd3	100	72.093	ENSFCAG00000014199	RPUSD3	98	72.093	Felis_catus
ENSMUSG00000051169	Rpusd3	80	50.542	ENSFALG00000012968	RPUSD3	100	50.542	Ficedula_albicollis
ENSMUSG00000051169	Rpusd3	75	77.612	ENSFDAG00000008350	RPUSD3	85	72.924	Fukomys_damarensis
ENSMUSG00000051169	Rpusd3	74	56.219	ENSGAGG00000007493	RPUSD3	82	54.753	Gopherus_agassizii
ENSMUSG00000051169	Rpusd3	100	72.965	ENSGGOG00000013120	RPUSD3	98	72.965	Gorilla_gorilla
ENSMUSG00000051169	Rpusd3	100	61.183	ENSHGLG00000011722	RPUSD3	100	60.668	Heterocephalus_glaber_female
ENSMUSG00000051169	Rpusd3	100	61.183	ENSHGLG00100016038	RPUSD3	100	60.668	Heterocephalus_glaber_male
ENSMUSG00000051169	Rpusd3	100	70.930	ENSSTOG00000002125	RPUSD3	98	70.930	Ictidomys_tridecemlineatus
ENSMUSG00000051169	Rpusd3	100	73.256	ENSJJAG00000012679	Rpusd3	100	73.256	Jaculus_jaculus
ENSMUSG00000051169	Rpusd3	96	71.299	ENSLAFG00000017501	RPUSD3	96	71.299	Loxodonta_africana
ENSMUSG00000051169	Rpusd3	100	72.384	ENSMFAG00000032407	RPUSD3	98	72.384	Macaca_fascicularis
ENSMUSG00000051169	Rpusd3	100	68.314	ENSMMUG00000010628	RPUSD3	97	75.641	Macaca_mulatta
ENSMUSG00000051169	Rpusd3	100	72.674	ENSMNEG00000040308	RPUSD3	98	72.674	Macaca_nemestrina
ENSMUSG00000051169	Rpusd3	100	72.674	ENSMLEG00000033940	RPUSD3	98	72.674	Mandrillus_leucophaeus
ENSMUSG00000051169	Rpusd3	100	84.302	ENSMAUG00000015473	Rpusd3	100	84.302	Mesocricetus_auratus
ENSMUSG00000051169	Rpusd3	100	71.221	ENSMICG00000002315	RPUSD3	99	71.976	Microcebus_murinus
ENSMUSG00000051169	Rpusd3	100	84.593	ENSMOCG00000022613	Rpusd3	100	84.593	Microtus_ochrogaster
ENSMUSG00000051169	Rpusd3	90	57.851	ENSMODG00000005210	RPUSD3	79	57.475	Monodelphis_domestica
ENSMUSG00000051169	Rpusd3	100	96.221	MGP_CAROLIEiJ_G0028725	Rpusd3	100	96.642	Mus_caroli
ENSMUSG00000051169	Rpusd3	100	93.314	MGP_PahariEiJ_G0022476	Rpusd3	100	93.314	Mus_pahari
ENSMUSG00000051169	Rpusd3	100	98.256	MGP_SPRETEiJ_G0029753	Rpusd3	100	98.256	Mus_spretus
ENSMUSG00000051169	Rpusd3	100	70.640	ENSMPUG00000017132	RPUSD3	98	70.640	Mustela_putorius_furo
ENSMUSG00000051169	Rpusd3	100	72.674	ENSMLUG00000006135	RPUSD3	99	72.674	Myotis_lucifugus
ENSMUSG00000051169	Rpusd3	99	76.023	ENSNGAG00000023704	Rpusd3	99	76.023	Nannospalax_galili
ENSMUSG00000051169	Rpusd3	96	64.607	ENSNLEG00000004214	RPUSD3	96	71.707	Nomascus_leucogenys
ENSMUSG00000051169	Rpusd3	76	62.835	ENSMEUG00000013098	-	100	62.835	Notamacropus_eugenii
ENSMUSG00000051169	Rpusd3	96	58.308	ENSOPRG00000002300	RPUSD3	94	58.308	Ochotona_princeps
ENSMUSG00000051169	Rpusd3	77	74.242	ENSODEG00000018137	RPUSD3	91	74.242	Octodon_degus
ENSMUSG00000051169	Rpusd3	83	47.535	ENSOANG00000012081	-	99	47.535	Ornithorhynchus_anatinus
ENSMUSG00000051169	Rpusd3	100	59.829	ENSOCUG00000027885	RPUSD3	100	59.829	Oryctolagus_cuniculus
ENSMUSG00000051169	Rpusd3	91	74.841	ENSOGAG00000012592	RPUSD3	100	74.841	Otolemur_garnettii
ENSMUSG00000051169	Rpusd3	100	73.547	ENSOARG00000005928	RPUSD3	98	73.547	Ovis_aries
ENSMUSG00000051169	Rpusd3	100	73.256	ENSPPAG00000038083	RPUSD3	98	73.256	Pan_paniscus
ENSMUSG00000051169	Rpusd3	100	72.093	ENSPPRG00000024433	RPUSD3	98	72.093	Panthera_pardus
ENSMUSG00000051169	Rpusd3	100	72.674	ENSPTIG00000006828	RPUSD3	100	72.674	Panthera_tigris_altaica
ENSMUSG00000051169	Rpusd3	100	72.965	ENSPTRG00000051760	RPUSD3	98	72.965	Pan_troglodytes
ENSMUSG00000051169	Rpusd3	100	72.965	ENSPANG00000023885	RPUSD3	98	72.965	Papio_anubis
ENSMUSG00000051169	Rpusd3	100	83.721	ENSPEMG00000017245	Rpusd3	100	83.721	Peromyscus_maniculatus_bairdii
ENSMUSG00000051169	Rpusd3	84	63.274	ENSPCIG00000021901	RPUSD3	84	60.764	Phascolarctos_cinereus
ENSMUSG00000051169	Rpusd3	100	72.965	ENSPPYG00000013676	RPUSD3	98	72.965	Pongo_abelii
ENSMUSG00000051169	Rpusd3	99	52.364	ENSPCAG00000013731	-	97	53.381	Procavia_capensis
ENSMUSG00000051169	Rpusd3	96	76.435	ENSPCOG00000018314	RPUSD3	94	76.435	Propithecus_coquereli
ENSMUSG00000051169	Rpusd3	100	72.384	ENSPVAG00000011107	RPUSD3	98	72.384	Pteropus_vampyrus
ENSMUSG00000051169	Rpusd3	100	82.558	ENSRNOG00000009084	Rpusd3	100	82.558	Rattus_norvegicus
ENSMUSG00000051169	Rpusd3	99	73.607	ENSRBIG00000041230	RPUSD3	97	73.607	Rhinopithecus_bieti
ENSMUSG00000051169	Rpusd3	99	73.607	ENSRROG00000043328	RPUSD3	97	73.607	Rhinopithecus_roxellana
ENSMUSG00000051169	Rpusd3	98	72.107	ENSSBOG00000036106	RPUSD3	97	72.107	Saimiri_boliviensis_boliviensis
ENSMUSG00000051169	Rpusd3	88	58.824	ENSSHAG00000015536	RPUSD3	97	56.478	Sarcophilus_harrisii
ENSMUSG00000051169	Rpusd3	100	70.640	ENSSSCG00000011555	RPUSD3	98	70.640	Sus_scrofa
ENSMUSG00000051169	Rpusd3	72	51.282	ENSTGUG00000008744	RPUSD3	95	50.901	Taeniopygia_guttata
ENSMUSG00000051169	Rpusd3	98	72.527	ENSTBEG00000000176	RPUSD3	97	73.310	Tupaia_belangeri
ENSMUSG00000051169	Rpusd3	100	71.512	ENSTTRG00000007544	RPUSD3	98	71.512	Tursiops_truncatus
ENSMUSG00000051169	Rpusd3	86	80.000	ENSUAMG00000011354	RPUSD3	94	76.898	Ursus_americanus
ENSMUSG00000051169	Rpusd3	100	72.674	ENSUMAG00000018830	RPUSD3	98	72.674	Ursus_maritimus
ENSMUSG00000051169	Rpusd3	100	72.384	ENSVVUG00000023735	RPUSD3	100	72.384	Vulpes_vulpes
ENSMUSG00000051169	Rpusd3	80	48.837	ENSXETG00000023546	rpusd3	98	47.842	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001522	pseudouridine synthesis	-	IEA	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0005739	mitochondrion	-	IEA	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0009451	RNA modification	-	IEA	Process
GO:0009982	pseudouridine synthase activity	-	IEA	Function
GO:0016853	isomerase activity	-	IEA	Function
GO:0070131	positive regulation of mitochondrial translation	-	ISO	Process