EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000051306 (Gene tree)
Gene ID: 76800
Gene Symbol: Usp42
Alias: 2410140K03Rik|3110031A07Rik|A630018G05Rik|D5Ertd591e
Full Name: ubiquitin specific peptidase 42
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 21956
Position: chr5: 143710325-143732280
Accession: 1924050
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000053287	-	5151	XM_006504754	ENSMUSP00000053955	1324 (aa)	XP_006504817	B2RQC2
ENSMUST00000129606	-	710	-	-	- (aa)	-	-
ENSMUST00000141225	-	654	-	-	- (aa)	-	-
ENSMUST00000155408	-	2359	-	-	- (aa)	-	-
ENSMUST00000141396	-	2554	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000051306's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000051306's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004197	cysteine-type endopeptidase activity	21873635.	IBA	Function
GO:0004843	thiol-dependent ubiquitin-specific protease activity	21873635.	IBA	Function
GO:0004843	thiol-dependent ubiquitin-specific protease activity	16904385.	IDA	Function
GO:0004843	thiol-dependent ubiquitin-specific protease activity	-	ISO	Function
GO:0005575	cellular_component	-	ND	Component
GO:0006511	ubiquitin-dependent protein catabolic process	-	IEA	Process
GO:0007283	spermatogenesis	16904385.	TAS	Process
GO:0008233	peptidase activity	-	IEA	Function
GO:0008234	cysteine-type peptidase activity	-	IEA	Function
GO:0016579	protein deubiquitination	21873635.	IBA	Process
GO:0016579	protein deubiquitination	16904385.	IDA	Process
GO:0016579	protein deubiquitination	-	ISO	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0030154	cell differentiation	-	IEA	Process
GO:0036459	thiol-dependent ubiquitinyl hydrolase activity	-	IEA	Function
GO:0042981	regulation of apoptotic process	21873635.	IBA	Process