EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000051329 (Gene tree)
Gene ID: 59015
Gene Symbol: Nup160
Alias: 2810011M03Rik|Gtl1-13
Full Name: nucleoporin 160
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 59114
Position: chr2: 90677215-90736328
Accession: 1926227
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000126503	-	658	-	-	- (aa)	-	-
ENSMUST00000130629	-	687	-	-	- (aa)	-	-
ENSMUST00000057481	-	5684	XM_006499968	ENSMUSP00000059289	1402 (aa)	XP_006500031	Q9Z0W3
ENSMUST00000154036	-	2673	-	-	- (aa)	-	-
ENSMUST00000132595	-	229	-	-	- (aa)	-	-
ENSMUST00000145669	-	762	-	-	- (aa)	-	-
ENSMUST00000136739	-	726	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000051329's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000051329's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000051329	Nup160	100	92.725	ENSG00000030066	NUP160	99	92.204	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000776	kinetochore	-	ISO	Component
GO:0005634	nucleus	-	IEA	Component
GO:0005643	nuclear pore	21873635.	IBA	Component
GO:0005643	nuclear pore	11564755.11684705.	IDA	Component
GO:0005643	nuclear pore	-	ISO	Component
GO:0006406	mRNA export from nucleus	11684705.	IDA	Process
GO:0006406	mRNA export from nucleus	-	ISO	Process
GO:0015031	protein transport	-	IEA	Process
GO:0017056	structural constituent of nuclear pore	21873635.	IBA	Function
GO:0017056	structural constituent of nuclear pore	11684705.	IDA	Function
GO:0017056	structural constituent of nuclear pore	-	ISO	Function
GO:0031080	nuclear pore outer ring	-	ISO	Component
GO:0051028	mRNA transport	-	IEA	Process
GO:0072006	nephron development	-	ISO	Process