EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000051550 (Gene tree)
Gene ID: 68490
Gene Symbol: Zfp579
Alias: 1110003A17Rik
Full Name: zinc finger protein 579
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 12676 bases
Position: chr7:4983483-4996158
Accession: 1915740
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000104212	zf-C2H2	PF00096.26	7.5e-35	1	7
ENSMUSP00000104212	zf-C2H2	PF00096.26	7.5e-35	2	7
ENSMUSP00000104212	zf-C2H2	PF00096.26	7.5e-35	3	7
ENSMUSP00000104212	zf-C2H2	PF00096.26	7.5e-35	4	7
ENSMUSP00000104212	zf-C2H2	PF00096.26	7.5e-35	5	7
ENSMUSP00000104212	zf-C2H2	PF00096.26	7.5e-35	6	7
ENSMUSP00000104212	zf-C2H2	PF00096.26	7.5e-35	7	7
ENSMUSP00000123963	zf-C2H2	PF00096.26	7.5e-35	1	7
ENSMUSP00000123963	zf-C2H2	PF00096.26	7.5e-35	2	7
ENSMUSP00000123963	zf-C2H2	PF00096.26	7.5e-35	3	7
ENSMUSP00000123963	zf-C2H2	PF00096.26	7.5e-35	4	7
ENSMUSP00000123963	zf-C2H2	PF00096.26	7.5e-35	5	7
ENSMUSP00000123963	zf-C2H2	PF00096.26	7.5e-35	6	7
ENSMUSP00000123963	zf-C2H2	PF00096.26	7.5e-35	7	7
ENSMUSP00000124074	zf-C2H2	PF00096.26	9e-14	1	3
ENSMUSP00000124074	zf-C2H2	PF00096.26	9e-14	2	3
ENSMUSP00000124074	zf-C2H2	PF00096.26	9e-14	3	3
ENSMUSP00000124074	zf-met	PF12874.7	6.4e-06	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000108572	-	2157	XM_006540335	ENSMUSP00000104212	562 (aa)	XP_006540398	Q80VM4
ENSMUST00000159754	-	1557	-	-	- (aa)	-	-
ENSMUST00000162502	-	794	-	ENSMUSP00000124074	236 (aa)	-	E0CYL8
ENSMUST00000160808	-	366	-	-	- (aa)	-	-
ENSMUST00000162731	-	2489	-	ENSMUSP00000123963	562 (aa)	-	Q80VM4
ENSMUST00000160225	-	856	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000051550's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000051550's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000051550	Zfp579	100	98.729	MGP_CAROLIEiJ_G0029140	Zfp579	100	98.729	Mus_caroli
ENSMUSG00000051550	Zfp579	100	97.687	MGP_PahariEiJ_G0021008	Zfp579	100	97.687	Mus_pahari
ENSMUSG00000051550	Zfp579	100	99.466	MGP_SPRETEiJ_G0030193	Zfp579	100	99.466	Mus_spretus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0008150	biological_process	-	ND	Process
GO:0046872	metal ion binding	-	IEA	Function