EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000052137 (Gene tree)
Gene ID: 77604
Gene Symbol: Rbm12b2
Alias: C430048L16Rik
Full Name: RNA binding motif protein 12 B2
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 6805 bases
Position: chr4:12089439-12096243
Accession: 1924854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000066311	RRM_1	PF00076.22	1.5e-32	1	3
ENSMUSP00000066311	RRM_1	PF00076.22	1.5e-32	2	3
ENSMUSP00000066311	RRM_1	PF00076.22	1.5e-32	3	3
ENSMUSP00000092765	RRM_1	PF00076.22	1.5e-32	1	3
ENSMUSP00000092765	RRM_1	PF00076.22	1.5e-32	2	3
ENSMUSP00000092765	RRM_1	PF00076.22	1.5e-32	3	3

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000095143	-	3147	XM_011250133	ENSMUSP00000092765	834 (aa)	XP_011248435	Q66JV4
ENSMUST00000063839	-	3327	XM_017320454	ENSMUSP00000066311	834 (aa)	XP_017175943	Q66JV4

Gene Model

Click here to download ENSMUSG00000052137's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000052137's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000052137	Rbm12b2	68	71.264	ENSMUSG00000089824	Rbm12	56	71.264
ENSMUSG00000052137	Rbm12b2	100	96.172	ENSMUSG00000046667	Rbm12b1	100	96.172

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000052137	Rbm12b2	100	71.154	ENSG00000183808	RBM12B	100	95.122	Homo_sapiens
ENSMUSG00000052137	Rbm12b2	74	37.849	ENSAPOG00000013963	rbm12b	96	37.849	Acanthochromis_polyacanthus
ENSMUSG00000052137	Rbm12b2	100	74.443	ENSAMEG00000007134	RBM12B	100	74.443	Ailuropoda_melanoleuca
ENSMUSG00000052137	Rbm12b2	66	38.462	ENSACIG00000014943	rbm12b	99	39.759	Amphilophus_citrinellus
ENSMUSG00000052137	Rbm12b2	74	39.723	ENSAOCG00000024270	rbm12b	95	39.723	Amphiprion_ocellaris
ENSMUSG00000052137	Rbm12b2	72	44.262	ENSAPEG00000022079	rbm12b	97	39.818	Amphiprion_percula
ENSMUSG00000052137	Rbm12b2	67	50.000	ENSATEG00000004578	rbm12b	85	50.000	Anabas_testudineus
ENSMUSG00000052137	Rbm12b2	86	53.020	ENSAPLG00000002020	RBM12B	100	53.020	Anas_platyrhynchos
ENSMUSG00000052137	Rbm12b2	88	41.607	ENSACAG00000003463	RBM12B	72	41.607	Anolis_carolinensis
ENSMUSG00000052137	Rbm12b2	100	73.162	ENSANAG00000034015	RBM12B	100	73.162	Aotus_nancymaae
ENSMUSG00000052137	Rbm12b2	67	49.333	ENSACLG00000005575	rbm12b	84	49.333	Astatotilapia_calliptera
ENSMUSG00000052137	Rbm12b2	64	49.333	ENSACLG00000005578	rbm12b	81	49.333	Astatotilapia_calliptera
ENSMUSG00000052137	Rbm12b2	50	56.977	ENSAMXG00000020853	zgc:153215	68	56.977	Astyanax_mexicanus
ENSMUSG00000052137	Rbm12b2	70	39.122	ENSAMXG00000041973	rbm12b	94	40.557	Astyanax_mexicanus
ENSMUSG00000052137	Rbm12b2	100	71.478	ENSBTAG00000013408	RBM12B	100	71.478	Bos_taurus
ENSMUSG00000052137	Rbm12b2	100	70.706	ENSCAFG00000009109	RBM12B	100	72.778	Canis_familiaris
ENSMUSG00000052137	Rbm12b2	100	71.722	ENSCAFG00020012203	RBM12B	100	70.455	Canis_lupus_dingo
ENSMUSG00000052137	Rbm12b2	77	75.000	ENSCHIG00000006790	RBM12B	89	75.000	Capra_hircus
ENSMUSG00000052137	Rbm12b2	100	63.866	ENSTSYG00000012515	RBM12B	100	69.740	Carlito_syrichta
ENSMUSG00000052137	Rbm12b2	100	67.120	ENSCAPG00000003543	RBM12B	100	64.084	Cavia_aperea
ENSMUSG00000052137	Rbm12b2	100	67.120	ENSCPOG00000007815	RBM12B	100	64.084	Cavia_porcellus
ENSMUSG00000052137	Rbm12b2	100	72.139	ENSCATG00000030769	RBM12B	100	71.824	Cercocebus_atys
ENSMUSG00000052137	Rbm12b2	100	67.435	ENSCLAG00000017617	RBM12B	100	72.027	Chinchilla_lanigera
ENSMUSG00000052137	Rbm12b2	100	63.347	ENSCSAG00000018559	RBM12B	100	72.115	Chlorocebus_sabaeus
ENSMUSG00000052137	Rbm12b2	98	64.669	ENSCHOG00000008934	RBM12B	100	62.986	Choloepus_hoffmanni
ENSMUSG00000052137	Rbm12b2	86	53.769	ENSCPBG00000003061	RBM12B	100	53.769	Chrysemys_picta_bellii
ENSMUSG00000052137	Rbm12b2	100	72.055	ENSCANG00000030379	RBM12B	100	72.055	Colobus_angolensis_palliatus
ENSMUSG00000052137	Rbm12b2	100	78.916	ENSCGRG00001008710	-	97	78.916	Cricetulus_griseus_chok1gshd
ENSMUSG00000052137	Rbm12b2	70	49.333	ENSCSEG00000004610	rbm12b	81	49.333	Cynoglossus_semilaevis
ENSMUSG00000052137	Rbm12b2	67	48.000	ENSCVAG00000011047	rbm12b	86	48.000	Cyprinodon_variegatus
ENSMUSG00000052137	Rbm12b2	52	46.377	ENSCVAG00000009259	-	99	46.377	Cyprinodon_variegatus
ENSMUSG00000052137	Rbm12b2	69	39.474	ENSDARG00000079717	rbm12b	82	40.726	Danio_rerio
ENSMUSG00000052137	Rbm12b2	58	30.571	ENSDARG00000055889	zgc:153215	99	30.571	Danio_rerio
ENSMUSG00000052137	Rbm12b2	100	71.332	ENSDNOG00000041608	RBM12B	100	70.310	Dasypus_novemcinctus
ENSMUSG00000052137	Rbm12b2	100	65.815	ENSDORG00000024034	-	100	64.931	Dipodomys_ordii
ENSMUSG00000052137	Rbm12b2	76	62.940	ENSETEG00000013005	-	86	64.587	Echinops_telfairi
ENSMUSG00000052137	Rbm12b2	54	31.648	ENSEBUG00000009015	-	71	31.648	Eptatretus_burgeri
ENSMUSG00000052137	Rbm12b2	100	72.210	ENSEASG00005016297	RBM12B	100	71.982	Equus_asinus_asinus
ENSMUSG00000052137	Rbm12b2	100	64.964	ENSECAG00000017870	RBM12B	100	64.045	Equus_caballus
ENSMUSG00000052137	Rbm12b2	58	30.366	ENSELUG00000009039	zgc:153215	97	30.366	Esox_lucius
ENSMUSG00000052137	Rbm12b2	100	73.295	ENSFCAG00000029274	RBM12B	100	73.295	Felis_catus
ENSMUSG00000052137	Rbm12b2	86	51.007	ENSFALG00000014893	RBM12B	100	51.007	Ficedula_albicollis
ENSMUSG00000052137	Rbm12b2	100	66.772	ENSFDAG00000005576	RBM12B	97	65.717	Fukomys_damarensis
ENSMUSG00000052137	Rbm12b2	67	46.667	ENSFHEG00000016425	rbm12b	85	46.667	Fundulus_heteroclitus
ENSMUSG00000052137	Rbm12b2	69	51.429	ENSGMOG00000013467	rbm12b	89	51.429	Gadus_morhua
ENSMUSG00000052137	Rbm12b2	86	54.362	ENSGALG00000035129	RBM12B	100	54.362	Gallus_gallus
ENSMUSG00000052137	Rbm12b2	67	46.667	ENSGAFG00000007224	rbm12b	86	46.667	Gambusia_affinis
ENSMUSG00000052137	Rbm12b2	57	30.409	ENSGAFG00000007845	zgc:153215	98	30.409	Gambusia_affinis
ENSMUSG00000052137	Rbm12b2	67	49.333	ENSGACG00000008682	rbm12b	85	49.333	Gasterosteus_aculeatus
ENSMUSG00000052137	Rbm12b2	86	53.691	ENSGAGG00000009774	RBM12B	100	53.691	Gopherus_agassizii
ENSMUSG00000052137	Rbm12b2	100	71.982	ENSGGOG00000011909	RBM12B	100	72.045	Gorilla_gorilla
ENSMUSG00000052137	Rbm12b2	71	49.333	ENSHBUG00000016227	rbm12b	88	49.333	Haplochromis_burtoni
ENSMUSG00000052137	Rbm12b2	100	66.183	ENSHGLG00000009063	RBM12B	100	64.523	Heterocephalus_glaber_female
ENSMUSG00000052137	Rbm12b2	100	66.183	ENSHGLG00100021324	RBM12B	100	64.523	Heterocephalus_glaber_male
ENSMUSG00000052137	Rbm12b2	67	49.333	ENSHCOG00000014952	rbm12b	89	49.333	Hippocampus_comes
ENSMUSG00000052137	Rbm12b2	75	50.667	ENSIPUG00000001167	RBM12B	93	50.667	Ictalurus_punctatus
ENSMUSG00000052137	Rbm12b2	100	75.995	ENSSTOG00000027445	RBM12B	100	75.995	Ictidomys_tridecemlineatus
ENSMUSG00000052137	Rbm12b2	100	70.442	ENSJJAG00000004165	-	100	70.102	Jaculus_jaculus
ENSMUSG00000052137	Rbm12b2	69	46.591	ENSKMAG00000013715	rbm12b	88	46.591	Kryptolebias_marmoratus
ENSMUSG00000052137	Rbm12b2	69	46.591	ENSKMAG00000013704	rbm12b	84	46.591	Kryptolebias_marmoratus
ENSMUSG00000052137	Rbm12b2	71	62.025	ENSLACG00000007177	RBM12B	95	50.450	Latimeria_chalumnae
ENSMUSG00000052137	Rbm12b2	67	52.000	ENSLOCG00000018344	rbm12b	86	52.000	Lepisosteus_oculatus
ENSMUSG00000052137	Rbm12b2	100	69.929	ENSLAFG00000029949	RBM12B	100	70.700	Loxodonta_africana
ENSMUSG00000052137	Rbm12b2	100	72.171	ENSMFAG00000045430	RBM12B	100	72.171	Macaca_fascicularis
ENSMUSG00000052137	Rbm12b2	100	71.267	ENSMMUG00000005558	RBM12B	100	72.115	Macaca_mulatta
ENSMUSG00000052137	Rbm12b2	100	72.171	ENSMNEG00000041292	RBM12B	100	72.171	Macaca_nemestrina
ENSMUSG00000052137	Rbm12b2	100	71.186	ENSMLEG00000037288	RBM12B	100	68.356	Mandrillus_leucophaeus
ENSMUSG00000052137	Rbm12b2	59	32.143	ENSMAMG00000012038	zgc:153215	94	32.143	Mastacembelus_armatus
ENSMUSG00000052137	Rbm12b2	71	50.633	ENSMAMG00000011998	rbm12b	87	50.633	Mastacembelus_armatus
ENSMUSG00000052137	Rbm12b2	67	49.333	ENSMZEG00005015005	rbm12b	86	49.333	Maylandia_zebra
ENSMUSG00000052137	Rbm12b2	67	49.333	ENSMZEG00005014845	rbm12b	85	48.611	Maylandia_zebra
ENSMUSG00000052137	Rbm12b2	59	57.253	ENSMGAG00000011985	RBM12B	99	57.253	Meleagris_gallopavo
ENSMUSG00000052137	Rbm12b2	100	79.028	ENSMAUG00000021752	-	100	79.028	Mesocricetus_auratus
ENSMUSG00000052137	Rbm12b2	100	72.600	ENSMICG00000036969	RBM12B	100	73.122	Microcebus_murinus
ENSMUSG00000052137	Rbm12b2	100	75.711	ENSMOCG00000005603	-	100	75.711	Microtus_ochrogaster
ENSMUSG00000052137	Rbm12b2	74	37.324	ENSMMOG00000002404	rbm12b	91	37.324	Mola_mola
ENSMUSG00000052137	Rbm12b2	97	59.692	ENSMODG00000007436	RBM12B	98	55.334	Monodelphis_domestica
ENSMUSG00000052137	Rbm12b2	59	30.273	ENSMALG00000001222	zgc:153215	99	30.273	Monopterus_albus
ENSMUSG00000052137	Rbm12b2	74	46.835	ENSMALG00000012059	rbm12b	91	46.835	Monopterus_albus
ENSMUSG00000052137	Rbm12b2	100	98.445	MGP_SPRETEiJ_G0026766	-	100	98.445	Mus_spretus
ENSMUSG00000052137	Rbm12b2	100	89.387	MGP_SPRETEiJ_G0026765	-	100	86.448	Mus_spretus
ENSMUSG00000052137	Rbm12b2	100	69.960	ENSMPUG00000018637	RBM12B	100	72.033	Mustela_putorius_furo
ENSMUSG00000052137	Rbm12b2	100	62.579	ENSMLUG00000002359	RBM12B	100	62.591	Myotis_lucifugus
ENSMUSG00000052137	Rbm12b2	100	70.538	ENSNGAG00000002801	-	100	67.849	Nannospalax_galili
ENSMUSG00000052137	Rbm12b2	67	49.333	ENSNBRG00000015057	rbm12b	86	49.333	Neolamprologus_brichardi
ENSMUSG00000052137	Rbm12b2	100	71.171	ENSNLEG00000032050	RBM12B	100	71.171	Nomascus_leucogenys
ENSMUSG00000052137	Rbm12b2	100	66.352	ENSODEG00000019204	RBM12B	100	71.547	Octodon_degus
ENSMUSG00000052137	Rbm12b2	67	49.333	ENSONIG00000020612	rbm12b	86	49.333	Oreochromis_niloticus
ENSMUSG00000052137	Rbm12b2	86	56.000	ENSOANG00000015735	-	97	56.000	Ornithorhynchus_anatinus
ENSMUSG00000052137	Rbm12b2	100	71.657	ENSOCUG00000010353	RBM12B	100	71.657	Oryctolagus_cuniculus
ENSMUSG00000052137	Rbm12b2	67	49.333	ENSORLG00000008228	rbm12b	83	49.333	Oryzias_latipes
ENSMUSG00000052137	Rbm12b2	67	49.333	ENSORLG00020013619	rbm12b	83	49.333	Oryzias_latipes_hni
ENSMUSG00000052137	Rbm12b2	67	49.333	ENSORLG00015019999	rbm12b	83	49.333	Oryzias_latipes_hsok
ENSMUSG00000052137	Rbm12b2	68	48.101	ENSOMEG00000022523	rbm12b	84	48.101	Oryzias_melastigma
ENSMUSG00000052137	Rbm12b2	100	64.712	ENSOGAG00000002979	RBM12B	100	62.892	Otolemur_garnettii
ENSMUSG00000052137	Rbm12b2	100	73.272	ENSPTIG00000020071	RBM12B	100	73.272	Panthera_tigris_altaica
ENSMUSG00000052137	Rbm12b2	100	71.267	ENSPTRG00000020420	RBM12B	99	72.476	Pan_troglodytes
ENSMUSG00000052137	Rbm12b2	100	71.299	ENSPANG00000035535	RBM12B	100	68.468	Papio_anubis
ENSMUSG00000052137	Rbm12b2	68	49.333	ENSPKIG00000018719	rbm12b	85	51.389	Paramormyrops_kingsleyae
ENSMUSG00000052137	Rbm12b2	58	33.140	ENSPKIG00000014851	zgc:153215	98	33.140	Paramormyrops_kingsleyae
ENSMUSG00000052137	Rbm12b2	85	53.820	ENSPSIG00000001348	RBM12B	100	53.820	Pelodiscus_sinensis
ENSMUSG00000052137	Rbm12b2	53	37.237	ENSPMGG00000012348	-	97	37.237	Periophthalmus_magnuspinnatus
ENSMUSG00000052137	Rbm12b2	100	79.647	ENSPEMG00000008279	-	100	79.647	Peromyscus_maniculatus_bairdii
ENSMUSG00000052137	Rbm12b2	97	60.061	ENSPCIG00000008556	RBM12B	100	60.522	Phascolarctos_cinereus
ENSMUSG00000052137	Rbm12b2	52	51.190	ENSPFOG00000017451	zgc:153215	67	51.190	Poecilia_formosa
ENSMUSG00000052137	Rbm12b2	69	42.697	ENSPFOG00000020937	rbm12b	84	42.697	Poecilia_formosa
ENSMUSG00000052137	Rbm12b2	69	42.697	ENSPLAG00000018782	rbm12b	87	42.697	Poecilia_latipinna
ENSMUSG00000052137	Rbm12b2	67	46.667	ENSPMEG00000011418	rbm12b	86	46.667	Poecilia_mexicana
ENSMUSG00000052137	Rbm12b2	67	46.667	ENSPREG00000020770	rbm12b	86	46.667	Poecilia_reticulata
ENSMUSG00000052137	Rbm12b2	100	63.247	ENSPPYG00000018745	RBM12B	100	72.061	Pongo_abelii
ENSMUSG00000052137	Rbm12b2	100	73.029	ENSPCOG00000023546	RBM12B	100	73.029	Propithecus_coquereli
ENSMUSG00000052137	Rbm12b2	100	67.562	ENSPVAG00000011803	RBM12B	100	66.702	Pteropus_vampyrus
ENSMUSG00000052137	Rbm12b2	67	49.333	ENSPNYG00000016696	rbm12b	86	49.333	Pundamilia_nyererei
ENSMUSG00000052137	Rbm12b2	67	49.296	ENSPNAG00000008126	rbm12b	83	49.296	Pygocentrus_nattereri
ENSMUSG00000052137	Rbm12b2	58	30.505	ENSPNAG00000025628	zgc:153215	99	30.505	Pygocentrus_nattereri
ENSMUSG00000052137	Rbm12b2	88	86.309	ENSRNOG00000055292	LOC679087	99	86.309	Rattus_norvegicus
ENSMUSG00000052137	Rbm12b2	100	86.477	ENSRNOG00000016330	Rbm12b	100	86.477	Rattus_norvegicus
ENSMUSG00000052137	Rbm12b2	100	72.398	ENSRBIG00000035046	RBM12B	100	72.398	Rhinopithecus_bieti
ENSMUSG00000052137	Rbm12b2	100	71.528	ENSRROG00000023660	RBM12B	100	71.412	Rhinopithecus_roxellana
ENSMUSG00000052137	Rbm12b2	100	70.090	ENSSBOG00000027592	RBM12B	100	70.090	Saimiri_boliviensis_boliviensis
ENSMUSG00000052137	Rbm12b2	97	59.846	ENSSHAG00000015335	RBM12B	100	60.308	Sarcophilus_harrisii
ENSMUSG00000052137	Rbm12b2	67	50.685	ENSSFOG00015001584	rbm12b	85	50.685	Scleropages_formosus
ENSMUSG00000052137	Rbm12b2	58	33.667	ENSSFOG00015009427	zgc:153215	99	33.667	Scleropages_formosus
ENSMUSG00000052137	Rbm12b2	75	42.052	ENSSMAG00000019708	rbm12b	97	42.052	Scophthalmus_maximus
ENSMUSG00000052137	Rbm12b2	74	42.063	ENSSDUG00000006856	rbm12b	95	42.063	Seriola_dumerili
ENSMUSG00000052137	Rbm12b2	50	48.750	ENSSLDG00000013581	zgc:153215	78	46.739	Seriola_lalandi_dorsalis
ENSMUSG00000052137	Rbm12b2	73	41.700	ENSSLDG00000016156	rbm12b	93	41.700	Seriola_lalandi_dorsalis
ENSMUSG00000052137	Rbm12b2	74	70.560	ENSSARG00000011845	-	84	70.560	Sorex_araneus
ENSMUSG00000052137	Rbm12b2	58	52.713	ENSSPUG00000016954	RBM12B	91	53.757	Sphenodon_punctatus
ENSMUSG00000052137	Rbm12b2	76	39.761	ENSSPAG00000006774	rbm12b	99	39.761	Stegastes_partitus
ENSMUSG00000052137	Rbm12b2	100	70.728	ENSSSCG00000006110	RBM12B	100	73.633	Sus_scrofa
ENSMUSG00000052137	Rbm12b2	59	55.000	ENSTGUG00000011860	RBM12B	97	55.000	Taeniopygia_guttata
ENSMUSG00000052137	Rbm12b2	68	46.835	ENSTRUG00000013738	rbm12b	87	46.835	Takifugu_rubripes
ENSMUSG00000052137	Rbm12b2	78	72.936	ENSTBEG00000000449	RBM12B	82	70.906	Tupaia_belangeri
ENSMUSG00000052137	Rbm12b2	100	70.880	ENSUAMG00000023639	RBM12B	100	70.993	Ursus_americanus
ENSMUSG00000052137	Rbm12b2	100	68.216	ENSUMAG00000016008	RBM12B	100	67.351	Ursus_maritimus
ENSMUSG00000052137	Rbm12b2	86	87.329	ENSVPAG00000001080	RBM12B	90	87.329	Vicugna_pacos
ENSMUSG00000052137	Rbm12b2	100	72.178	ENSVVUG00000002694	RBM12B	100	71.023	Vulpes_vulpes
ENSMUSG00000052137	Rbm12b2	58	30.453	ENSXETG00000025920	-	97	30.453	Xenopus_tropicalis
ENSMUSG00000052137	Rbm12b2	70	41.892	ENSXETG00000014696	rbm12b	81	40.476	Xenopus_tropicalis
ENSMUSG00000052137	Rbm12b2	75	47.390	ENSXETG00000014694	rbm12b	100	46.516	Xenopus_tropicalis
ENSMUSG00000052137	Rbm12b2	55	39.264	ENSXCOG00000019735	-	100	39.752	Xiphophorus_couchianus
ENSMUSG00000052137	Rbm12b2	58	31.179	ENSXCOG00000019654	zgc:153215	98	31.179	Xiphophorus_couchianus
ENSMUSG00000052137	Rbm12b2	67	46.667	ENSXMAG00000014213	rbm12b	86	46.667	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0008150	biological_process	-	ND	Process