EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000052676 (Gene tree)
Gene ID: 215693
Gene Symbol: Zmat1
Alias: B930008K04Rik
Full Name: zinc finger%2C matrin type 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 37838 bases
Position: chrX:134971372-135009209
Accession: 2442284
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000066815	zf-met	PF12874.7	0.00039	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000151252	-	3038	-	-	- (aa)	-	-
ENSMUST00000141849	-	2231	-	-	- (aa)	-	-
ENSMUST00000113185	-	3378	-	ENSMUSP00000108810	613 (aa)	-	Z4YL92
ENSMUST00000064659	-	3501	-	ENSMUSP00000066815	647 (aa)	-	G5E8E4

Gene Model

Click here to download ENSMUSG00000052676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000052676's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000052676	Zmat1	97	60.287	ENSG00000166432	ZMAT1	94	60.287	Homo_sapiens
ENSMUSG00000052676	Zmat1	97	59.873	ENSAMEG00000004976	ZMAT1	100	59.873	Ailuropoda_melanoleuca
ENSMUSG00000052676	Zmat1	97	57.735	ENSANAG00000028725	ZMAT1	100	60.265	Aotus_nancymaae
ENSMUSG00000052676	Zmat1	100	53.857	ENSBTAG00000003601	ZMAT1	87	54.399	Bos_taurus
ENSMUSG00000052676	Zmat1	97	57.416	ENSCJAG00000019724	ZMAT1	100	57.416	Callithrix_jacchus
ENSMUSG00000052676	Zmat1	97	59.395	ENSCAFG00000017730	ZMAT1	100	59.395	Canis_familiaris
ENSMUSG00000052676	Zmat1	73	62.105	ENSCAFG00020007319	ZMAT1	100	62.105	Canis_lupus_dingo
ENSMUSG00000052676	Zmat1	73	59.119	ENSCHIG00000010507	ZMAT1	100	59.119	Capra_hircus
ENSMUSG00000052676	Zmat1	96	57.556	ENSTSYG00000007330	ZMAT1	99	57.556	Carlito_syrichta
ENSMUSG00000052676	Zmat1	96	50.560	ENSCPOG00000000581	ZMAT1	99	49.767	Cavia_porcellus
ENSMUSG00000052676	Zmat1	97	58.852	ENSCCAG00000023924	ZMAT1	100	58.852	Cebus_capucinus
ENSMUSG00000052676	Zmat1	100	59.168	ENSCATG00000000551	ZMAT1	100	58.723	Cercocebus_atys
ENSMUSG00000052676	Zmat1	100	48.382	ENSCLAG00000004197	ZMAT1	100	48.382	Chinchilla_lanigera
ENSMUSG00000052676	Zmat1	100	62.615	ENSCSAG00000009795	ZMAT1	90	62.615	Chlorocebus_sabaeus
ENSMUSG00000052676	Zmat1	92	36.194	ENSCPBG00000001356	ZMAT1	96	37.546	Chrysemys_picta_bellii
ENSMUSG00000052676	Zmat1	96	60.225	ENSCANG00000037194	ZMAT1	99	60.225	Colobus_angolensis_palliatus
ENSMUSG00000052676	Zmat1	100	77.898	ENSCGRG00001023697	Zmat1	100	77.898	Cricetulus_griseus_chok1gshd
ENSMUSG00000052676	Zmat1	97	77.157	ENSCGRG00000001964	Zmat1	99	77.157	Cricetulus_griseus_crigri
ENSMUSG00000052676	Zmat1	95	53.704	ENSDNOG00000014852	-	100	53.704	Dasypus_novemcinctus
ENSMUSG00000052676	Zmat1	74	45.102	ENSDNOG00000044924	-	99	44.732	Dasypus_novemcinctus
ENSMUSG00000052676	Zmat1	100	55.401	ENSDORG00000006821	Zmat1	100	55.556	Dipodomys_ordii
ENSMUSG00000052676	Zmat1	96	45.981	ENSETEG00000020259	ZMAT1	99	45.498	Echinops_telfairi
ENSMUSG00000052676	Zmat1	96	56.070	ENSEASG00005014185	ZMAT1	93	56.070	Equus_asinus_asinus
ENSMUSG00000052676	Zmat1	100	60.092	ENSECAG00000013390	ZMAT1	100	62.316	Equus_caballus
ENSMUSG00000052676	Zmat1	96	57.348	ENSFCAG00000023394	ZMAT1	99	57.348	Felis_catus
ENSMUSG00000052676	Zmat1	99	50.233	ENSFDAG00000004063	ZMAT1	96	50.308	Fukomys_damarensis
ENSMUSG00000052676	Zmat1	100	36.940	ENSGAGG00000002326	ZMAT1	100	36.567	Gopherus_agassizii
ENSMUSG00000052676	Zmat1	97	60.128	ENSGGOG00000025784	ZMAT1	94	60.548	Gorilla_gorilla
ENSMUSG00000052676	Zmat1	100	48.998	ENSHGLG00000002494	ZMAT1	100	48.998	Heterocephalus_glaber_female
ENSMUSG00000052676	Zmat1	100	53.159	ENSHGLG00100004968	ZMAT1	100	53.159	Heterocephalus_glaber_male
ENSMUSG00000052676	Zmat1	95	59.241	ENSSTOG00000011140	ZMAT1	100	62.731	Ictidomys_tridecemlineatus
ENSMUSG00000052676	Zmat1	100	59.259	ENSJJAG00000020188	Zmat1	100	59.259	Jaculus_jaculus
ENSMUSG00000052676	Zmat1	91	50.247	ENSLAFG00000015656	ZMAT1	100	49.918	Loxodonta_africana
ENSMUSG00000052676	Zmat1	93	56.752	ENSMFAG00000042343	ZMAT1	89	57.013	Macaca_fascicularis
ENSMUSG00000052676	Zmat1	100	62.769	ENSMMUG00000002151	ZMAT1	100	62.980	Macaca_mulatta
ENSMUSG00000052676	Zmat1	100	62.308	ENSMNEG00000036310	ZMAT1	96	59.341	Macaca_nemestrina
ENSMUSG00000052676	Zmat1	98	59.277	ENSMLEG00000005031	ZMAT1	96	59.498	Mandrillus_leucophaeus
ENSMUSG00000052676	Zmat1	100	77.434	ENSMAUG00000002941	Zmat1	100	77.434	Mesocricetus_auratus
ENSMUSG00000052676	Zmat1	96	60.383	ENSMICG00000003313	ZMAT1	99	60.383	Microcebus_murinus
ENSMUSG00000052676	Zmat1	100	73.725	ENSMOCG00000000169	Zmat1	100	73.725	Microtus_ochrogaster
ENSMUSG00000052676	Zmat1	100	93.818	MGP_PahariEiJ_G0031943	Zmat1	100	93.818	Mus_pahari
ENSMUSG00000052676	Zmat1	100	98.920	MGP_SPRETEiJ_G0034567	Zmat1	100	98.920	Mus_spretus
ENSMUSG00000052676	Zmat1	96	51.511	ENSMPUG00000002130	ZMAT1	99	51.511	Mustela_putorius_furo
ENSMUSG00000052676	Zmat1	97	53.397	ENSMLUG00000004417	ZMAT1	100	52.923	Myotis_lucifugus
ENSMUSG00000052676	Zmat1	100	70.479	ENSNGAG00000006608	Zmat1	100	70.479	Nannospalax_galili
ENSMUSG00000052676	Zmat1	97	56.619	ENSNLEG00000030520	ZMAT1	94	56.847	Nomascus_leucogenys
ENSMUSG00000052676	Zmat1	64	51.332	ENSOPRG00000009950	-	100	51.332	Ochotona_princeps
ENSMUSG00000052676	Zmat1	85	50.179	ENSOCUG00000004164	ZMAT1	86	49.642	Oryctolagus_cuniculus
ENSMUSG00000052676	Zmat1	97	59.236	ENSOGAG00000033601	ZMAT1	100	59.236	Otolemur_garnettii
ENSMUSG00000052676	Zmat1	96	56.688	ENSOARG00000001897	ZMAT1	99	56.688	Ovis_aries
ENSMUSG00000052676	Zmat1	97	60.287	ENSPPAG00000039554	ZMAT1	95	60.159	Pan_paniscus
ENSMUSG00000052676	Zmat1	96	57.188	ENSPPRG00000005258	ZMAT1	99	57.188	Panthera_pardus
ENSMUSG00000052676	Zmat1	96	57.188	ENSPTIG00000019057	ZMAT1	99	57.188	Panthera_tigris_altaica
ENSMUSG00000052676	Zmat1	100	63.328	ENSPTRG00000041840	ZMAT1	95	60.476	Pan_troglodytes
ENSMUSG00000052676	Zmat1	100	79.938	ENSPEMG00000009944	Zmat1	100	79.938	Peromyscus_maniculatus_bairdii
ENSMUSG00000052676	Zmat1	97	57.576	ENSPPYG00000020561	ZMAT1	93	57.803	Pongo_abelii
ENSMUSG00000052676	Zmat1	87	55.738	ENSPCAG00000010283	ZMAT1	94	55.738	Procavia_capensis
ENSMUSG00000052676	Zmat1	95	59.253	ENSPCOG00000021386	ZMAT1	98	59.253	Propithecus_coquereli
ENSMUSG00000052676	Zmat1	96	57.760	ENSPVAG00000013206	ZMAT1	99	57.760	Pteropus_vampyrus
ENSMUSG00000052676	Zmat1	100	84.853	ENSRNOG00000024135	Zmat1	100	84.853	Rattus_norvegicus
ENSMUSG00000052676	Zmat1	95	60.196	ENSRBIG00000034121	ZMAT1	94	60.423	Rhinopithecus_bieti
ENSMUSG00000052676	Zmat1	96	59.903	ENSRROG00000036747	ZMAT1	93	60.129	Rhinopithecus_roxellana
ENSMUSG00000052676	Zmat1	97	58.214	ENSSBOG00000029970	ZMAT1	100	60.762	Saimiri_boliviensis_boliviensis
ENSMUSG00000052676	Zmat1	93	41.445	ENSSHAG00000011087	-	100	42.803	Sarcophilus_harrisii
ENSMUSG00000052676	Zmat1	61	47.222	ENSSARG00000003063	-	62	47.685	Sorex_araneus
ENSMUSG00000052676	Zmat1	77	33.229	ENSSPUG00000004951	ZMAT1	92	32.727	Sphenodon_punctatus
ENSMUSG00000052676	Zmat1	96	60.674	ENSSSCG00000012512	ZMAT1	100	62.316	Sus_scrofa
ENSMUSG00000052676	Zmat1	91	57.264	ENSTBEG00000012967	ZMAT1	100	57.264	Tupaia_belangeri
ENSMUSG00000052676	Zmat1	96	59.486	ENSTTRG00000016662	ZMAT1	99	58.786	Tursiops_truncatus
ENSMUSG00000052676	Zmat1	73	62.526	ENSUAMG00000015209	ZMAT1	100	62.526	Ursus_americanus
ENSMUSG00000052676	Zmat1	73	62.526	ENSUMAG00000000627	ZMAT1	100	62.526	Ursus_maritimus
ENSMUSG00000052676	Zmat1	96	60.383	ENSVPAG00000006267	ZMAT1	99	60.383	Vicugna_pacos
ENSMUSG00000052676	Zmat1	100	61.846	ENSVVUG00000005342	ZMAT1	90	61.846	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0008270	zinc ion binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function