EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000052727 (Gene tree)
Gene ID: 17755
Gene Symbol: Map1b
Alias: LC1|MAP5|Mtap-5|Mtap1b|Mtap5
Full Name: microtubule-associated protein 1B
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 95095
Position: chr13: 99421446-99516540
Accession: 1306778
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000223693	-	1759	-	-	- (aa)	-	-
ENSMUST00000064762	-	11808	-	ENSMUSP00000068374	2464 (aa)	-	P14873
ENSMUST00000224605	-	366	-	-	- (aa)	-	-
ENSMUST00000223725	-	2669	-	ENSMUSP00000153390	61 (aa)	-	A0A286YDV1
ENSMUST00000224702	-	2150	-	-	- (aa)	-	-
ENSMUST00000223820	-	1364	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000052727's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000052727's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000052727	Map1b	75	97.826	ENSG00000131711	MAP1B	100	98.361	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000226	microtubule cytoskeleton organization	21873635.	IBA	Process
GO:0001578	microtubule bundle formation	11581286.	IMP	Process
GO:0001578	microtubule bundle formation	-	ISO	Process
GO:0001750	photoreceptor outer segment	24664738.	IDA	Component
GO:0003779	actin binding	21873635.	IBA	Function
GO:0003779	actin binding	-	ISO	Function
GO:0005515	protein binding	17308336.22474336.23572079.24664738.	IPI	Function
GO:0005519	cytoskeletal regulatory protein binding	11581286.	TAS	Function
GO:0005543	phospholipid binding	-	ISO	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0005829	cytosol	16885219.	IDA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005856	cytoskeleton	-	ISO	Component
GO:0005874	microtubule	21873635.	IBA	Component
GO:0005874	microtubule	-	ISO	Component
GO:0005875	microtubule associated complex	21873635.	IBA	Component
GO:0005875	microtubule associated complex	-	ISO	Component
GO:0005875	microtubule associated complex	11581286.	TAS	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0007017	microtubule-based process	11581286.	TAS	Process
GO:0007026	negative regulation of microtubule depolymerization	-	ISO	Process
GO:0007399	nervous system development	-	IEA	Process
GO:0007409	axonogenesis	21873635.	IBA	Process
GO:0007409	axonogenesis	11891784.	IGI	Process
GO:0008017	microtubule binding	21873635.	IBA	Function
GO:0008017	microtubule binding	-	ISO	Function
GO:0009987	cellular process	-	ISO	Process
GO:0014069	postsynaptic density	17114649.	IDA	Component
GO:0014069	postsynaptic density	-	ISO	Component
GO:0015631	tubulin binding	21873635.	IBA	Function
GO:0016358	dendrite development	21873635.	IBA	Process
GO:0016358	dendrite development	11581286.	IMP	Process
GO:0030054	cell junction	-	IEA	Component
GO:0030424	axon	-	ISO	Component
GO:0030425	dendrite	21873635.	IBA	Component
GO:0030425	dendrite	25788676.	IDA	Component
GO:0030425	dendrite	-	ISO	Component
GO:0030426	growth cone	-	ISO	Component
GO:0031114	regulation of microtubule depolymerization	21873635.	IBA	Process
GO:0031116	positive regulation of microtubule polymerization	-	ISO	Process
GO:0032387	negative regulation of intracellular transport	16536727.	IMP	Process
GO:0036477	somatodendritic compartment	-	ISO	Component
GO:0042995	cell projection	21873635.	IBA	Component
GO:0043025	neuronal cell body	21873635.	IBA	Component
GO:0043025	neuronal cell body	25788676.	IDA	Component
GO:0043025	neuronal cell body	-	ISO	Component
GO:0043196	varicosity	-	ISO	Component
GO:0043204	perikaryon	-	ISO	Component
GO:0044877	protein-containing complex binding	-	ISO	Function
GO:0045202	synapse	21873635.	IBA	Component
GO:0045666	positive regulation of neuron differentiation	-	ISO	Process
GO:0045773	positive regulation of axon extension	-	ISO	Process
GO:0047497	mitochondrion transport along microtubule	16536727.	IMP	Process
GO:0048471	perinuclear region of cytoplasm	-	ISO	Component
GO:0048675	axon extension	16536727.	IMP	Process
GO:0061162	establishment of monopolar cell polarity	11029282.	IMP	Process
GO:0097440	apical dendrite	-	ISO	Component
GO:0097441	basal dendrite	-	ISO	Component
GO:0097457	hippocampal mossy fiber	-	ISO	Component