EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000052812 (Gene tree)
Gene ID: -
Gene Symbol: Atad2b
Alias: 1110014E10Rik|D530031C13Rik
Full Name: ATPase family%2C AAA domain containing 2B
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 130042
Position: chr12: 4917353-5047394
Accession: 2444798
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000218303	-	1824	-	-	- (aa)	-	-
ENSMUST00000219187	-	4829	-	-	- (aa)	-	-
ENSMUST00000218859	-	1343	-	ENSMUSP00000151695	259 (aa)	-	A0A1W2P7J4
ENSMUST00000045664	-	8035	XM_006515115	ENSMUSP00000047445	1460 (aa)	XP_006515179	E9Q166
ENSMUST00000220408	-	3034	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000052812's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000052812's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000052812	Atad2b	94	52.823	ENSG00000156802	ATAD2	96	47.818	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003682	chromatin binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0016887	ATPase activity	21873635.	IBA	Function
GO:0031936	negative regulation of chromatin silencing	21873635.	IBA	Process
GO:0042393	histone binding	21873635.	IBA	Function
GO:0045944	positive regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0070577	lysine-acetylated histone binding	-	ISO	Function