EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000052926 (Gene tree)
Gene ID
69724
Gene Symbol
Rnaseh2a
Alias
2400006P09Rik
Full Name
ribonuclease H2%2C large subunit
Gene Type
protein_coding
Species
Mus_musculus
Status
putative
Strand
Minus strand
Length
13158 bases
Position
chr8:84956610-84969767
Accession
1916974
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000066769RNase_HIIPF01351.182.8e-5111
ENSMUSP00000121864RNase_HIIPF01351.183e-5111
ENSMUSP00000105358RNase_HIIPF01351.184.9e-5111
ENSMUSP00000105360RNase_HIIPF01351.184.9e-5111
ENSMUSP00000120374RNase_HIIPF01351.184.9e-5111
ENSMUSP00000118442RNase_HIIPF01351.183e-0811
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000128972-1141-ENSMUSP00000121864258 (aa)-F6RP29
ENSMUST00000122931-829--- (aa)--
ENSMUST00000137791-749--- (aa)--
ENSMUST00000147812-1532XM_011248497ENSMUSP00000120374301 (aa)XP_011246799Q9CWY8
ENSMUST00000126029-338--- (aa)--
ENSMUST00000130902-423-ENSMUSP0000011616411 (aa)-D3Z6L4
ENSMUST00000109736-2981-ENSMUSP00000105358301 (aa)-Q9CWY8
ENSMUST00000109738-2044-ENSMUSP00000105360301 (aa)-Q9CWY8
ENSMUST00000140561-716-ENSMUSP0000011844254 (aa)-D3YWG3
ENSMUST00000065049-1006-ENSMUSP00000066769254 (aa)-Q05C51
Gene Model
Click here to download ENSMUSG00000052926's gene model file
Pathways
Pathway IDPathway NameSource
mmu03030DNA replicationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000052926's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000052926Rnaseh2a10098.148ENSG00000104889RNASEH2A9994.286Homo_sapiens
ENSMUSG00000052926Rnaseh2a9967.843ENSAPOG00000004101rnaseh2a10060.645Acanthochromis_polyacanthus
ENSMUSG00000052926Rnaseh2a10092.593ENSAMEG00000012323RNASEH2A10084.718Ailuropoda_melanoleuca
ENSMUSG00000052926Rnaseh2a10066.667ENSACIG00000002658rnaseh2a10066.667Amphilophus_citrinellus
ENSMUSG00000052926Rnaseh2a9966.667ENSAOCG00000009217rnaseh2a10059.677Amphiprion_ocellaris
ENSMUSG00000052926Rnaseh2a9966.667ENSAPEG00000022937rnaseh2a10059.677Amphiprion_percula
ENSMUSG00000052926Rnaseh2a10066.667ENSATEG00000000908rnaseh2a10061.290Anabas_testudineus
ENSMUSG00000052926Rnaseh2a9970.980ENSACAG00000003338RNASEH2A10065.449Anolis_carolinensis
ENSMUSG00000052926Rnaseh2a10066.023ENSANAG00000037932RNASEH2A10065.798Aotus_nancymaae
ENSMUSG00000052926Rnaseh2a10068.519ENSACLG00000009169rnaseh2a10060.323Astatotilapia_calliptera
ENSMUSG00000052926Rnaseh2a9858.800ENSAMXG00000000436rnaseh2a10053.135Astyanax_mexicanus
ENSMUSG00000052926Rnaseh2a10098.148ENSBTAG00000009661RNASEH2A10086.711Bos_taurus
ENSMUSG00000052926Rnaseh2a8758.222WBGene00004383rnh-29153.285Caenorhabditis_elegans
ENSMUSG00000052926Rnaseh2a10096.296ENSCJAG00000004873RNASEH2A10086.093Callithrix_jacchus
ENSMUSG00000052926Rnaseh2a10092.593ENSCAFG00000017159RNASEH2A10084.053Canis_familiaris
ENSMUSG00000052926Rnaseh2a10092.593ENSCAFG00020005190RNASEH2A6084.053Canis_lupus_dingo
ENSMUSG00000052926Rnaseh2a10098.148ENSCHIG00000014460RNASEH2A10086.711Capra_hircus
ENSMUSG00000052926Rnaseh2a10096.296ENSTSYG00000025418RNASEH2A10086.424Carlito_syrichta
ENSMUSG00000052926Rnaseh2a6476.166ENSCAPG00000003411RNASEH2A10076.166Cavia_aperea
ENSMUSG00000052926Rnaseh2a9896.226ENSCPOG00000038877RNASEH2A10082.119Cavia_porcellus
ENSMUSG00000052926Rnaseh2a10096.296ENSCCAG00000030453RNASEH2A10087.086Cebus_capucinus
ENSMUSG00000052926Rnaseh2a10096.296ENSCATG00000029609RNASEH2A10085.382Cercocebus_atys
ENSMUSG00000052926Rnaseh2a9894.340ENSCLAG00000014930RNASEH2A10085.050Chinchilla_lanigera
ENSMUSG00000052926Rnaseh2a10094.444ENSCSAG00000006567RNASEH2A10085.050Chlorocebus_sabaeus
ENSMUSG00000052926Rnaseh2a10072.222ENSCPBG00000023909RNASEH2A10063.366Chrysemys_picta_bellii
ENSMUSG00000052926Rnaseh2a9359.746ENSCING00000006190-9554.007Ciona_intestinalis
ENSMUSG00000052926Rnaseh2a9955.731ENSCSAVG00000010904-10050.831Ciona_savignyi
ENSMUSG00000052926Rnaseh2a10098.148ENSCANG00000027433RNASEH2A10085.382Colobus_angolensis_palliatus
ENSMUSG00000052926Rnaseh2a10096.296ENSCGRG00001005021Rnaseh2a10093.377Cricetulus_griseus_chok1gshd
ENSMUSG00000052926Rnaseh2a10096.296ENSCGRG00000016602Rnaseh2a10093.377Cricetulus_griseus_crigri
ENSMUSG00000052926Rnaseh2a10068.519ENSCSEG00000009842rnaseh2a10060.390Cynoglossus_semilaevis
ENSMUSG00000052926Rnaseh2a9665.385ENSCVAG00000021203rnaseh2a9956.187Cyprinodon_variegatus
ENSMUSG00000052926Rnaseh2a9969.412ENSDARG00000018891rnaseh2a10063.380Danio_rerio
ENSMUSG00000052926Rnaseh2a10092.593ENSDNOG00000036532RNASEH2A10083.333Dasypus_novemcinctus
ENSMUSG00000052926Rnaseh2a10090.157ENSDORG00000009008Rnaseh2a10086.711Dipodomys_ordii
ENSMUSG00000052926Rnaseh2a9753.414FBgn0031252CG136908548.311Drosophila_melanogaster
ENSMUSG00000052926Rnaseh2a10094.444ENSETEG00000001956-10073.709Echinops_telfairi
ENSMUSG00000052926Rnaseh2a8569.565ENSEBUG00000003380rnaseh2a9053.925Eptatretus_burgeri
ENSMUSG00000052926Rnaseh2a10092.593ENSEASG00005004118RNASEH2A9488.846Equus_asinus_asinus
ENSMUSG00000052926Rnaseh2a10092.593ENSECAG00000007013RNASEH2A10084.053Equus_caballus
ENSMUSG00000052926Rnaseh2a10087.037ENSEEUG00000008222RNASEH2A10076.744Erinaceus_europaeus
ENSMUSG00000052926Rnaseh2a10066.667ENSELUG00000023079rnaseh2a10062.403Esox_lucius
ENSMUSG00000052926Rnaseh2a10090.741ENSFCAG00000000474RNASEH2A10083.389Felis_catus
ENSMUSG00000052926Rnaseh2a9892.453ENSFDAG00000003595RNASEH2A9788.189Fukomys_damarensis
ENSMUSG00000052926Rnaseh2a10068.519ENSFHEG00000007682rnaseh2a10062.541Fundulus_heteroclitus
ENSMUSG00000052926Rnaseh2a9965.217ENSGMOG00000005650rnaseh2a10059.355Gadus_morhua
ENSMUSG00000052926Rnaseh2a9871.698ENSGALG00000052002RNASEH2A7360.927Gallus_gallus
ENSMUSG00000052926Rnaseh2a10068.519ENSGAFG00000009624rnaseh2a10061.238Gambusia_affinis
ENSMUSG00000052926Rnaseh2a10066.667ENSGACG00000016019rnaseh2a10060.714Gasterosteus_aculeatus
ENSMUSG00000052926Rnaseh2a10074.074ENSGAGG00000013859RNASEH2A10063.696Gopherus_agassizii
ENSMUSG00000052926Rnaseh2a10098.148ENSGGOG00000005846RNASEH2A10086.711Gorilla_gorilla
ENSMUSG00000052926Rnaseh2a10068.519ENSHBUG00000005267rnaseh2a9962.329Haplochromis_burtoni
ENSMUSG00000052926Rnaseh2a9892.453ENSHGLG00000018801RNASEH2A10083.113Heterocephalus_glaber_female
ENSMUSG00000052926Rnaseh2a9892.453ENSHGLG00100015773RNASEH2A10083.444Heterocephalus_glaber_male
ENSMUSG00000052926Rnaseh2a9966.275ENSHCOG00000016593rnaseh2a10060.586Hippocampus_comes
ENSMUSG00000052926Rnaseh2a10070.370ENSIPUG00000024299rnaseh2a10061.489Ictalurus_punctatus
ENSMUSG00000052926Rnaseh2a10092.593ENSSTOG00000006224RNASEH2A9988.235Ictidomys_tridecemlineatus
ENSMUSG00000052926Rnaseh2a10090.741ENSJJAG00000017547Rnaseh2a10085.714Jaculus_jaculus
ENSMUSG00000052926Rnaseh2a10068.519ENSKMAG00000019829rnaseh2a10062.215Kryptolebias_marmoratus
ENSMUSG00000052926Rnaseh2a9967.059ENSLBEG00000020494rnaseh2a10061.290Labrus_bergylta
ENSMUSG00000052926Rnaseh2a10074.074ENSLACG00000007789RNASEH2A9962.353Latimeria_chalumnae
ENSMUSG00000052926Rnaseh2a10070.370ENSLOCG00000007890rnaseh2a9962.951Lepisosteus_oculatus
ENSMUSG00000052926Rnaseh2a10094.444ENSLAFG00000015571RNASEH2A10083.444Loxodonta_africana
ENSMUSG00000052926Rnaseh2a10096.296ENSMFAG00000002011RNASEH2A10085.382Macaca_fascicularis
ENSMUSG00000052926Rnaseh2a10096.296ENSMMUG00000005690RNASEH2A10085.050Macaca_mulatta
ENSMUSG00000052926Rnaseh2a10096.296ENSMNEG00000033054RNASEH2A10085.382Macaca_nemestrina
ENSMUSG00000052926Rnaseh2a10096.296ENSMLEG00000043654RNASEH2A10085.382Mandrillus_leucophaeus
ENSMUSG00000052926Rnaseh2a10068.519ENSMAMG00000003062rnaseh2a9964.085Mastacembelus_armatus
ENSMUSG00000052926Rnaseh2a10066.667ENSMZEG00005023857rnaseh2a10059.677Maylandia_zebra
ENSMUSG00000052926Rnaseh2a10094.444ENSMAUG00000008286-10092.754Mesocricetus_auratus
ENSMUSG00000052926Rnaseh2a5492.683ENSMAUG00000021740-10092.683Mesocricetus_auratus
ENSMUSG00000052926Rnaseh2a10098.148ENSMICG00000016430RNASEH2A10085.762Microcebus_murinus
ENSMUSG00000052926Rnaseh2a100100.000ENSMOCG00000017408Rnaseh2a10094.352Microtus_ochrogaster
ENSMUSG00000052926Rnaseh2a9965.217ENSMMOG00000008447rnaseh2a10065.098Mola_mola
ENSMUSG00000052926Rnaseh2a10075.926ENSMODG00000006997RNASEH2A10068.182Monodelphis_domestica
ENSMUSG00000052926Rnaseh2a9969.020ENSMALG00000021607rnaseh2a10063.529Monopterus_albus
ENSMUSG00000052926Rnaseh2a100100.000MGP_CAROLIEiJ_G0031319-100100.000Mus_caroli
ENSMUSG00000052926Rnaseh2a100100.000MGP_PahariEiJ_G0022924Rnaseh2a100100.000Mus_pahari
ENSMUSG00000052926Rnaseh2a100100.000MGP_SPRETEiJ_G0032438Rnaseh2a100100.000Mus_spretus
ENSMUSG00000052926Rnaseh2a10090.741ENSMPUG00000004586RNASEH2A10084.385Mustela_putorius_furo
ENSMUSG00000052926Rnaseh2a10092.593ENSMLUG00000012723RNASEH2A10085.382Myotis_lucifugus
ENSMUSG00000052926Rnaseh2a10094.444ENSNGAG00000017988Rnaseh2a10088.704Nannospalax_galili
ENSMUSG00000052926Rnaseh2a10068.519ENSNBRG00000018731rnaseh2a10060.323Neolamprologus_brichardi
ENSMUSG00000052926Rnaseh2a10098.148ENSNLEG00000012806RNASEH2A10086.711Nomascus_leucogenys
ENSMUSG00000052926Rnaseh2a10077.778ENSMEUG00000006001RNASEH2A10074.648Notamacropus_eugenii
ENSMUSG00000052926Rnaseh2a9970.356ENSOPRG00000004811RNASEH2A10068.543Ochotona_princeps
ENSMUSG00000052926Rnaseh2a9894.340ENSODEG00000009772RNASEH2A10084.768Octodon_degus
ENSMUSG00000052926Rnaseh2a10068.519ENSONIG00000018033rnaseh2a9959.677Oreochromis_niloticus
ENSMUSG00000052926Rnaseh2a9868.000ENSOANG00000009079RNASEH2A10061.311Ornithorhynchus_anatinus
ENSMUSG00000052926Rnaseh2a9969.020ENSORLG00000004042rnaseh2a10062.662Oryzias_latipes
ENSMUSG00000052926Rnaseh2a9969.020ENSORLG00020009483rnaseh2a10062.662Oryzias_latipes_hni
ENSMUSG00000052926Rnaseh2a9969.020ENSORLG00015007548rnaseh2a10062.662Oryzias_latipes_hsok
ENSMUSG00000052926Rnaseh2a10066.667ENSOMEG00000016454rnaseh2a10066.279Oryzias_melastigma
ENSMUSG00000052926Rnaseh2a10090.741ENSOGAG00000012214RNASEH2A10082.119Otolemur_garnettii
ENSMUSG00000052926Rnaseh2a10098.148ENSOARG00000010721RNASEH2A10086.711Ovis_aries
ENSMUSG00000052926Rnaseh2a10098.148ENSPPAG00000028092RNASEH2A10086.711Pan_paniscus
ENSMUSG00000052926Rnaseh2a10090.741ENSPPRG00000010585RNASEH2A10083.721Panthera_pardus
ENSMUSG00000052926Rnaseh2a10087.037ENSPTIG00000013366RNASEH2A10083.056Panthera_tigris_altaica
ENSMUSG00000052926Rnaseh2a10098.148ENSPTRG00000010542RNASEH2A10086.047Pan_troglodytes
ENSMUSG00000052926Rnaseh2a10096.296ENSPANG00000034495RNASEH2A10085.382Papio_anubis
ENSMUSG00000052926Rnaseh2a9969.412ENSPKIG00000009756rnaseh2a10063.844Paramormyrops_kingsleyae
ENSMUSG00000052926Rnaseh2a5771.034ENSPSIG00000012039RNASEH2A10061.224Pelodiscus_sinensis
ENSMUSG00000052926Rnaseh2a9966.008ENSPMGG00000023392rnaseh2a10065.882Periophthalmus_magnuspinnatus
ENSMUSG00000052926Rnaseh2a10096.296ENSPEMG00000018009Rnaseh2a10093.709Peromyscus_maniculatus_bairdii
ENSMUSG00000052926Rnaseh2a9678.846ENSPMAG00000009060rnaseh2a9861.921Petromyzon_marinus
ENSMUSG00000052926Rnaseh2a10075.926ENSPCIG00000014119RNASEH2A10066.773Phascolarctos_cinereus
ENSMUSG00000052926Rnaseh2a10066.667ENSPFOG00000012627rnaseh2a10060.065Poecilia_formosa
ENSMUSG00000052926Rnaseh2a6066.026ENSPLAG00000018723-9058.654Poecilia_latipinna
ENSMUSG00000052926Rnaseh2a10066.667ENSPLAG00000015901rnaseh2a10067.059Poecilia_latipinna
ENSMUSG00000052926Rnaseh2a10066.667ENSPMEG00000000647rnaseh2a10067.451Poecilia_mexicana
ENSMUSG00000052926Rnaseh2a6066.667ENSPMEG00000009032-9359.135Poecilia_mexicana
ENSMUSG00000052926Rnaseh2a10066.667ENSPREG00000015015rnaseh2a10061.794Poecilia_reticulata
ENSMUSG00000052926Rnaseh2a10098.148ENSPPYG00000009608RNASEH2A10085.762Pongo_abelii
ENSMUSG00000052926Rnaseh2a10092.593ENSPCAG00000015319RNASEH2A10084.385Procavia_capensis
ENSMUSG00000052926Rnaseh2a10096.296ENSPCOG00000003686RNASEH2A10086.093Propithecus_coquereli
ENSMUSG00000052926Rnaseh2a10096.296ENSPVAG00000014703RNASEH2A10068.106Pteropus_vampyrus
ENSMUSG00000052926Rnaseh2a10068.519ENSPNYG00000023986rnaseh2a10056.230Pundamilia_nyererei
ENSMUSG00000052926Rnaseh2a10068.519ENSPNAG00000021017rnaseh2a10061.039Pygocentrus_nattereri
ENSMUSG00000052926Rnaseh2a100100.000ENSRNOG00000003504Rnaseh2a10093.023Rattus_norvegicus
ENSMUSG00000052926Rnaseh2a10098.148ENSRBIG00000023554RNASEH2A10085.714Rhinopithecus_bieti
ENSMUSG00000052926Rnaseh2a10098.148ENSRROG00000043799RNASEH2A10085.714Rhinopithecus_roxellana
ENSMUSG00000052926Rnaseh2a9342.800YNL072WRNH2018142.578Saccharomyces_cerevisiae
ENSMUSG00000052926Rnaseh2a10098.148ENSSBOG00000033164RNASEH2A10087.043Saimiri_boliviensis_boliviensis
ENSMUSG00000052926Rnaseh2a10072.222ENSSHAG00000015552RNASEH2A10066.452Sarcophilus_harrisii
ENSMUSG00000052926Rnaseh2a10070.370ENSSFOG00015009692rnaseh2a10063.607Scleropages_formosus
ENSMUSG00000052926Rnaseh2a9966.667ENSSMAG00000013986rnaseh2a10059.677Scophthalmus_maximus
ENSMUSG00000052926Rnaseh2a10066.667ENSSDUG00000005280rnaseh2a10060.884Seriola_dumerili
ENSMUSG00000052926Rnaseh2a10066.667ENSSLDG00000023766rnaseh2a10060.323Seriola_lalandi_dorsalis
ENSMUSG00000052926Rnaseh2a9964.822ENSSPAG00000012769rnaseh2a10058.387Stegastes_partitus
ENSMUSG00000052926Rnaseh2a10098.148ENSSSCG00000013737RNASEH2A10085.479Sus_scrofa
ENSMUSG00000052926Rnaseh2a10064.815ENSTRUG00000000049rnaseh2a10059.164Takifugu_rubripes
ENSMUSG00000052926Rnaseh2a10066.667ENSTNIG00000004533rnaseh2a9959.677Tetraodon_nigroviridis
ENSMUSG00000052926Rnaseh2a10094.444ENSTTRG00000003592RNASEH2A10089.671Tursiops_truncatus
ENSMUSG00000052926Rnaseh2a10092.593ENSUAMG00000019593RNASEH2A9991.429Ursus_americanus
ENSMUSG00000052926Rnaseh2a10094.444ENSUMAG00000006254-7389.224Ursus_maritimus
ENSMUSG00000052926Rnaseh2a10068.519ENSXETG00000004762rnaseh2a9862.458Xenopus_tropicalis
ENSMUSG00000052926Rnaseh2a10068.519ENSXCOG00000013485rnaseh2a10061.889Xiphophorus_couchianus
ENSMUSG00000052926Rnaseh2a10068.519ENSXMAG00000006953rnaseh2a10061.889Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003676nucleic acid binding-IEAFunction
GO:0003723RNA binding-IEAFunction
GO:0004518nuclease activity-IEAFunction
GO:0004519endonuclease activity-IEAFunction
GO:0004523RNA-DNA hybrid ribonuclease activity21873635.IBAFunction
GO:0004523RNA-DNA hybrid ribonuclease activity-ISOFunction
GO:0005634nucleus-IEAComponent
GO:0005654nucleoplasm-ISOComponent
GO:0005829cytosol-ISOComponent
GO:0006298mismatch repair21873635.IBAProcess
GO:0006298mismatch repair23603115.IMPProcess
GO:0006298mismatch repair23603115.ISOProcess
GO:0006401RNA catabolic process-ISOProcess
GO:0016070RNA metabolic process-IEAProcess
GO:0016787hydrolase activity-IEAFunction
GO:0032299ribonuclease H2 complex21873635.IBAComponent
GO:0032299ribonuclease H2 complex19923215.IDAComponent
GO:0032299ribonuclease H2 complex-ISOComponent
GO:0043137DNA replication, removal of RNA primer21873635.IBAProcess
GO:0046872metal ion binding-IEAFunction

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