EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000053286 (Gene tree)
Gene ID: 98685
Gene Symbol: Trmt1l
Alias: 1190005F20Rik|Trm1-like
Full Name: tRNA methyltransferase 1 like
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 29620 bases
Position: chr1:151428542-151458161
Accession: 1916185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000068309	TRM	PF02005.16	4.5e-66	1	2
ENSMUSP00000068309	TRM	PF02005.16	4.5e-66	2	2

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000188179	-	1567	-	-	- (aa)	-	-
ENSMUST00000188679	-	3380	-	-	- (aa)	-	-
ENSMUST00000189655	-	2441	-	ENSMUSP00000140009	158 (aa)	-	A0A087WQ23
ENSMUST00000186244	-	1989	-	-	- (aa)	-	-
ENSMUST00000185230	-	1527	-	-	- (aa)	-	-
ENSMUST00000188843	-	2371	-	-	- (aa)	-	-
ENSMUST00000065625	-	2749	XM_006529976	ENSMUSP00000068309	728 (aa)	-	A0A0R4J0U8

Gene Model

Click here to download ENSMUSG00000053286's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000053286's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000053286	Trmt1l	100	87.722	ENSG00000121486	TRMT1L	99	96.667	Homo_sapiens
ENSMUSG00000053286	Trmt1l	86	59.937	ENSAPOG00000011807	trmt1l	98	56.982	Acanthochromis_polyacanthus
ENSMUSG00000053286	Trmt1l	100	86.395	ENSAMEG00000013538	TRMT1L	100	87.211	Ailuropoda_melanoleuca
ENSMUSG00000053286	Trmt1l	68	62.048	ENSACIG00000012049	trmt1l	96	62.048	Amphilophus_citrinellus
ENSMUSG00000053286	Trmt1l	85	61.093	ENSAOCG00000018112	trmt1l	97	61.093	Amphiprion_ocellaris
ENSMUSG00000053286	Trmt1l	86	60.095	ENSAPEG00000021433	trmt1l	97	60.063	Amphiprion_percula
ENSMUSG00000053286	Trmt1l	88	60.829	ENSATEG00000004573	trmt1l	97	63.973	Anabas_testudineus
ENSMUSG00000053286	Trmt1l	96	69.615	ENSAPLG00000008394	TRMT1L	99	69.615	Anas_platyrhynchos
ENSMUSG00000053286	Trmt1l	86	72.727	ENSACAG00000002342	TRMT1L	86	72.727	Anolis_carolinensis
ENSMUSG00000053286	Trmt1l	100	87.722	ENSANAG00000038162	TRMT1L	100	87.722	Aotus_nancymaae
ENSMUSG00000053286	Trmt1l	96	57.022	ENSACLG00000021625	trmt1l	93	60.369	Astatotilapia_calliptera
ENSMUSG00000053286	Trmt1l	86	62.145	ENSAMXG00000009602	trmt1l	89	61.912	Astyanax_mexicanus
ENSMUSG00000053286	Trmt1l	100	85.792	ENSBTAG00000011285	TRMT1L	100	85.792	Bos_taurus
ENSMUSG00000053286	Trmt1l	100	86.357	ENSCJAG00000005456	TRMT1L	100	86.221	Callithrix_jacchus
ENSMUSG00000053286	Trmt1l	99	86.512	ENSCAFG00000013518	TRMT1L	98	87.193	Canis_familiaris
ENSMUSG00000053286	Trmt1l	100	86.531	ENSCAFG00020015640	TRMT1L	100	87.211	Canis_lupus_dingo
ENSMUSG00000053286	Trmt1l	100	86.333	ENSCHIG00000016522	TRMT1L	100	86.333	Capra_hircus
ENSMUSG00000053286	Trmt1l	100	85.812	ENSTSYG00000010465	TRMT1L	100	85.812	Carlito_syrichta
ENSMUSG00000053286	Trmt1l	72	86.957	ENSCAPG00000012562	TRMT1L	88	87.319	Cavia_aperea
ENSMUSG00000053286	Trmt1l	100	85.363	ENSCPOG00000001567	TRMT1L	100	85.773	Cavia_porcellus
ENSMUSG00000053286	Trmt1l	100	88.131	ENSCCAG00000018699	TRMT1L	100	88.131	Cebus_capucinus
ENSMUSG00000053286	Trmt1l	97	88.152	ENSCATG00000043114	TRMT1L	100	87.483	Cercocebus_atys
ENSMUSG00000053286	Trmt1l	98	69.468	ENSCLAG00000010853	-	98	70.055	Chinchilla_lanigera
ENSMUSG00000053286	Trmt1l	100	86.731	ENSCLAG00000010801	-	100	87.688	Chinchilla_lanigera
ENSMUSG00000053286	Trmt1l	97	88.152	ENSCSAG00000012880	TRMT1L	100	87.483	Chlorocebus_sabaeus
ENSMUSG00000053286	Trmt1l	60	93.004	ENSCHOG00000011164	TRMT1L	89	75.000	Choloepus_hoffmanni
ENSMUSG00000053286	Trmt1l	89	75.116	ENSCPBG00000015694	TRMT1L	92	74.847	Chrysemys_picta_bellii
ENSMUSG00000053286	Trmt1l	97	87.588	ENSCANG00000031107	TRMT1L	100	86.939	Colobus_angolensis_palliatus
ENSMUSG00000053286	Trmt1l	100	94.384	ENSCGRG00001019297	Trmt1l	100	94.384	Cricetulus_griseus_chok1gshd
ENSMUSG00000053286	Trmt1l	100	94.384	ENSCGRG00000005036	Trmt1l	100	94.384	Cricetulus_griseus_crigri
ENSMUSG00000053286	Trmt1l	88	60.310	ENSCSEG00000001248	trmt1l	93	61.218	Cynoglossus_semilaevis
ENSMUSG00000053286	Trmt1l	89	58.283	ENSCVAG00000012274	trmt1l	96	57.774	Cyprinodon_variegatus
ENSMUSG00000053286	Trmt1l	85	60.443	ENSDARG00000042057	trmt1l	92	62.395	Danio_rerio
ENSMUSG00000053286	Trmt1l	100	85.831	ENSDNOG00000005239	TRMT1L	100	85.831	Dasypus_novemcinctus
ENSMUSG00000053286	Trmt1l	98	77.902	ENSDORG00000003298	Trmt1l	99	87.963	Dipodomys_ordii
ENSMUSG00000053286	Trmt1l	82	76.457	ENSETEG00000015895	TRMT1L	91	76.457	Echinops_telfairi
ENSMUSG00000053286	Trmt1l	88	48.287	ENSEBUG00000010301	trmt1l	97	48.287	Eptatretus_burgeri
ENSMUSG00000053286	Trmt1l	100	82.345	ENSEASG00005005551	TRMT1L	100	82.749	Equus_asinus_asinus
ENSMUSG00000053286	Trmt1l	99	86.081	ENSECAG00000020999	TRMT1L	95	86.486	Equus_caballus
ENSMUSG00000053286	Trmt1l	99	72.115	ENSEEUG00000014110	TRMT1L	100	72.665	Erinaceus_europaeus
ENSMUSG00000053286	Trmt1l	85	61.972	ENSELUG00000020587	trmt1l	89	62.128	Esox_lucius
ENSMUSG00000053286	Trmt1l	100	86.494	ENSFCAG00000011285	TRMT1L	100	87.176	Felis_catus
ENSMUSG00000053286	Trmt1l	90	70.258	ENSFALG00000003177	TRMT1L	100	70.258	Ficedula_albicollis
ENSMUSG00000053286	Trmt1l	100	86.339	ENSFDAG00000008822	TRMT1L	100	84.189	Fukomys_damarensis
ENSMUSG00000053286	Trmt1l	73	62.132	ENSFHEG00000014328	trmt1l	99	62.132	Fundulus_heteroclitus
ENSMUSG00000053286	Trmt1l	87	59.812	ENSGMOG00000009535	trmt1l	99	59.812	Gadus_morhua
ENSMUSG00000053286	Trmt1l	90	70.213	ENSGALG00000033077	TRMT1L	85	71.252	Gallus_gallus
ENSMUSG00000053286	Trmt1l	91	57.879	ENSGAFG00000012445	trmt1l	93	58.652	Gambusia_affinis
ENSMUSG00000053286	Trmt1l	86	60.315	ENSGACG00000005050	trmt1l	98	61.413	Gasterosteus_aculeatus
ENSMUSG00000053286	Trmt1l	88	75.349	ENSGAGG00000007441	TRMT1L	84	75.349	Gopherus_agassizii
ENSMUSG00000053286	Trmt1l	100	87.722	ENSGGOG00000011778	TRMT1L	100	87.722	Gorilla_gorilla
ENSMUSG00000053286	Trmt1l	93	58.017	ENSHBUG00000000622	trmt1l	97	62.248	Haplochromis_burtoni
ENSMUSG00000053286	Trmt1l	100	82.627	ENSHGLG00000003135	-	100	82.627	Heterocephalus_glaber_female
ENSMUSG00000053286	Trmt1l	100	72.432	ENSHGLG00000012595	-	99	72.973	Heterocephalus_glaber_female
ENSMUSG00000053286	Trmt1l	100	86.731	ENSHGLG00100019412	-	100	86.731	Heterocephalus_glaber_male
ENSMUSG00000053286	Trmt1l	100	72.432	ENSHGLG00100004569	-	99	72.973	Heterocephalus_glaber_male
ENSMUSG00000053286	Trmt1l	85	60.925	ENSIPUG00000008873	trmt1l	97	60.287	Ictalurus_punctatus
ENSMUSG00000053286	Trmt1l	100	87.671	ENSSTOG00000010332	TRMT1L	100	87.671	Ictidomys_tridecemlineatus
ENSMUSG00000053286	Trmt1l	100	83.584	ENSJJAG00000010929	Trmt1l	100	83.128	Jaculus_jaculus
ENSMUSG00000053286	Trmt1l	85	60.353	ENSKMAG00000010310	trmt1l	90	60.289	Kryptolebias_marmoratus
ENSMUSG00000053286	Trmt1l	90	58.621	ENSLBEG00000003487	trmt1l	90	60.063	Labrus_bergylta
ENSMUSG00000053286	Trmt1l	83	57.878	ENSLBEG00000007982	-	92	59.391	Labrus_bergylta
ENSMUSG00000053286	Trmt1l	88	66.104	ENSLACG00000008447	TRMT1L	95	66.256	Latimeria_chalumnae
ENSMUSG00000053286	Trmt1l	86	63.422	ENSLOCG00000001781	trmt1l	89	63.422	Lepisosteus_oculatus
ENSMUSG00000053286	Trmt1l	100	86.027	ENSLAFG00000004339	TRMT1L	100	86.594	Loxodonta_africana
ENSMUSG00000053286	Trmt1l	97	88.011	ENSMFAG00000037592	TRMT1L	100	87.347	Macaca_fascicularis
ENSMUSG00000053286	Trmt1l	97	87.870	ENSMMUG00000013879	TRMT1L	100	87.211	Macaca_mulatta
ENSMUSG00000053286	Trmt1l	97	88.152	ENSMNEG00000041637	TRMT1L	100	87.483	Macaca_nemestrina
ENSMUSG00000053286	Trmt1l	97	88.152	ENSMLEG00000004840	TRMT1L	100	87.483	Mandrillus_leucophaeus
ENSMUSG00000053286	Trmt1l	85	61.551	ENSMAMG00000015305	trmt1l	98	61.551	Mastacembelus_armatus
ENSMUSG00000053286	Trmt1l	88	60.215	ENSMZEG00005017822	trmt1l	93	60.215	Maylandia_zebra
ENSMUSG00000053286	Trmt1l	89	70.706	ENSMGAG00000000930	TRMT1L	99	70.706	Meleagris_gallopavo
ENSMUSG00000053286	Trmt1l	100	88.813	ENSMAUG00000019870	Trmt1l	100	88.813	Mesocricetus_auratus
ENSMUSG00000053286	Trmt1l	100	88.267	ENSMICG00000009494	TRMT1L	100	88.267	Microcebus_murinus
ENSMUSG00000053286	Trmt1l	100	93.407	ENSMOCG00000016453	Trmt1l	100	93.407	Microtus_ochrogaster
ENSMUSG00000053286	Trmt1l	84	59.615	ENSMMOG00000016961	trmt1l	97	59.135	Mola_mola
ENSMUSG00000053286	Trmt1l	90	78.168	ENSMODG00000007454	TRMT1L	76	78.168	Monodelphis_domestica
ENSMUSG00000053286	Trmt1l	94	56.553	ENSMALG00000019306	trmt1l	98	56.553	Monopterus_albus
ENSMUSG00000053286	Trmt1l	100	98.901	MGP_CAROLIEiJ_G0014693	Trmt1l	100	98.901	Mus_caroli
ENSMUSG00000053286	Trmt1l	100	97.671	MGP_PahariEiJ_G0027929	Trmt1l	100	97.671	Mus_pahari
ENSMUSG00000053286	Trmt1l	86	99.399	MGP_SPRETEiJ_G0015500	Trmt1l	100	99.399	Mus_spretus
ENSMUSG00000053286	Trmt1l	100	83.379	ENSMPUG00000011859	TRMT1L	100	84.469	Mustela_putorius_furo
ENSMUSG00000053286	Trmt1l	100	86.027	ENSMLUG00000001136	TRMT1L	100	86.164	Myotis_lucifugus
ENSMUSG00000053286	Trmt1l	100	87.415	ENSNGAG00000011685	Trmt1l	100	86.767	Nannospalax_galili
ENSMUSG00000053286	Trmt1l	62	66.026	ENSNBRG00000004053	trmt1l	94	65.132	Neolamprologus_brichardi
ENSMUSG00000053286	Trmt1l	100	88.131	ENSNLEG00000018030	TRMT1L	100	88.131	Nomascus_leucogenys
ENSMUSG00000053286	Trmt1l	83	67.391	ENSMEUG00000011344	TRMT1L	83	67.391	Notamacropus_eugenii
ENSMUSG00000053286	Trmt1l	89	74.119	ENSOPRG00000000680	TRMT1L	99	74.119	Ochotona_princeps
ENSMUSG00000053286	Trmt1l	100	81.943	ENSODEG00000000826	TRMT1L	100	81.446	Octodon_degus
ENSMUSG00000053286	Trmt1l	96	56.742	ENSONIG00000007823	trmt1l	100	61.502	Oreochromis_niloticus
ENSMUSG00000053286	Trmt1l	89	73.960	ENSOANG00000001010	TRMT1L	99	73.960	Ornithorhynchus_anatinus
ENSMUSG00000053286	Trmt1l	90	85.474	ENSOCUG00000004896	TRMT1L	92	85.627	Oryctolagus_cuniculus
ENSMUSG00000053286	Trmt1l	84	61.514	ENSORLG00000029610	trmt1l	95	63.481	Oryzias_latipes
ENSMUSG00000053286	Trmt1l	84	61.514	ENSORLG00020002203	trmt1l	90	61.404	Oryzias_latipes_hni
ENSMUSG00000053286	Trmt1l	84	61.514	ENSORLG00015021512	trmt1l	90	61.404	Oryzias_latipes_hsok
ENSMUSG00000053286	Trmt1l	80	60.000	ENSOMEG00000016275	trmt1l	87	59.619	Oryzias_melastigma
ENSMUSG00000053286	Trmt1l	89	75.772	ENSOGAG00000016186	TRMT1L	99	75.772	Otolemur_garnettii
ENSMUSG00000053286	Trmt1l	100	86.179	ENSOARG00000003786	TRMT1L	100	86.179	Ovis_aries
ENSMUSG00000053286	Trmt1l	100	87.858	ENSPPAG00000029141	TRMT1L	100	87.858	Pan_paniscus
ENSMUSG00000053286	Trmt1l	100	86.357	ENSPPRG00000023981	TRMT1L	100	87.040	Panthera_pardus
ENSMUSG00000053286	Trmt1l	100	86.494	ENSPTIG00000021754	TRMT1L	100	87.176	Panthera_tigris_altaica
ENSMUSG00000053286	Trmt1l	100	87.858	ENSPTRG00000001776	TRMT1L	100	87.858	Pan_troglodytes
ENSMUSG00000053286	Trmt1l	97	85.654	ENSPANG00000020890	TRMT1L	100	85.075	Papio_anubis
ENSMUSG00000053286	Trmt1l	94	58.179	ENSPKIG00000005941	trmt1l	89	61.950	Paramormyrops_kingsleyae
ENSMUSG00000053286	Trmt1l	89	74.228	ENSPSIG00000010011	TRMT1L	95	74.228	Pelodiscus_sinensis
ENSMUSG00000053286	Trmt1l	74	57.143	ENSPMGG00000021359	trmt1l	95	57.505	Periophthalmus_magnuspinnatus
ENSMUSG00000053286	Trmt1l	96	93.143	ENSPEMG00000000031	Trmt1l	100	92.339	Peromyscus_maniculatus_bairdii
ENSMUSG00000053286	Trmt1l	85	56.757	ENSPMAG00000005838	trmt1l	100	56.300	Petromyzon_marinus
ENSMUSG00000053286	Trmt1l	89	78.120	ENSPCIG00000002409	TRMT1L	86	78.120	Phascolarctos_cinereus
ENSMUSG00000053286	Trmt1l	91	57.903	ENSPFOG00000003872	trmt1l	100	60.653	Poecilia_formosa
ENSMUSG00000053286	Trmt1l	91	57.903	ENSPLAG00000010387	trmt1l	93	59.140	Poecilia_latipinna
ENSMUSG00000053286	Trmt1l	91	57.903	ENSPMEG00000011828	trmt1l	98	61.488	Poecilia_mexicana
ENSMUSG00000053286	Trmt1l	88	59.265	ENSPREG00000002866	trmt1l	93	59.293	Poecilia_reticulata
ENSMUSG00000053286	Trmt1l	100	87.585	ENSPPYG00000000416	TRMT1L	100	87.585	Pongo_abelii
ENSMUSG00000053286	Trmt1l	87	84.913	ENSPCAG00000008257	TRMT1L	89	84.457	Procavia_capensis
ENSMUSG00000053286	Trmt1l	86	80.198	ENSPCOG00000005682	TRMT1L	93	80.198	Propithecus_coquereli
ENSMUSG00000053286	Trmt1l	100	77.341	ENSPVAG00000005961	TRMT1L	100	77.763	Pteropus_vampyrus
ENSMUSG00000053286	Trmt1l	86	59.464	ENSPNYG00000005607	trmt1l	97	62.416	Pundamilia_nyererei
ENSMUSG00000053286	Trmt1l	86	61.442	ENSPNAG00000004389	trmt1l	89	61.442	Pygocentrus_nattereri
ENSMUSG00000053286	Trmt1l	100	96.016	ENSRNOG00000002580	Trmt1l	100	96.016	Rattus_norvegicus
ENSMUSG00000053286	Trmt1l	97	87.870	ENSRBIG00000042589	TRMT1L	100	87.211	Rhinopithecus_bieti
ENSMUSG00000053286	Trmt1l	97	87.870	ENSRROG00000032183	TRMT1L	100	87.211	Rhinopithecus_roxellana
ENSMUSG00000053286	Trmt1l	100	87.176	ENSSBOG00000029282	TRMT1L	100	87.176	Saimiri_boliviensis_boliviensis
ENSMUSG00000053286	Trmt1l	91	59.647	ENSSFOG00015004878	trmt1l	91	61.360	Scleropages_formosus
ENSMUSG00000053286	Trmt1l	55	69.231	ENSSMAG00000015425	trmt1l	89	69.231	Scophthalmus_maximus
ENSMUSG00000053286	Trmt1l	87	60.625	ENSSDUG00000021807	trmt1l	97	63.898	Seriola_dumerili
ENSMUSG00000053286	Trmt1l	87	60.592	ENSSLDG00000016579	trmt1l	98	62.914	Seriola_lalandi_dorsalis
ENSMUSG00000053286	Trmt1l	65	83.991	ENSSARG00000010135	TRMT1L	86	83.991	Sorex_araneus
ENSMUSG00000053286	Trmt1l	80	78.351	ENSSPUG00000003927	TRMT1L	96	77.148	Sphenodon_punctatus
ENSMUSG00000053286	Trmt1l	86	60.883	ENSSPAG00000008597	trmt1l	91	60.692	Stegastes_partitus
ENSMUSG00000053286	Trmt1l	99	79.692	ENSSSCG00000021393	TRMT1L	100	79.897	Sus_scrofa
ENSMUSG00000053286	Trmt1l	89	71.053	ENSTGUG00000003737	TRMT1L	96	71.053	Taeniopygia_guttata
ENSMUSG00000053286	Trmt1l	75	70.000	ENSTRUG00000002396	trmt1l	95	70.000	Takifugu_rubripes
ENSMUSG00000053286	Trmt1l	58	64.000	ENSTNIG00000005534	trmt1l	99	64.000	Tetraodon_nigroviridis
ENSMUSG00000053286	Trmt1l	86	81.683	ENSTBEG00000016498	TRMT1L	86	81.683	Tupaia_belangeri
ENSMUSG00000053286	Trmt1l	100	85.150	ENSTTRG00000005892	TRMT1L	100	85.150	Tursiops_truncatus
ENSMUSG00000053286	Trmt1l	100	86.259	ENSUAMG00000020936	TRMT1L	100	87.211	Ursus_americanus
ENSMUSG00000053286	Trmt1l	99	86.104	ENSUMAG00000021919	TRMT1L	99	87.057	Ursus_maritimus
ENSMUSG00000053286	Trmt1l	90	88.073	ENSVPAG00000011854	TRMT1L	100	88.073	Vicugna_pacos
ENSMUSG00000053286	Trmt1l	100	86.395	ENSVVUG00000009166	TRMT1L	100	87.075	Vulpes_vulpes
ENSMUSG00000053286	Trmt1l	71	58.857	ENSXETG00000004539	trmt1l	95	59.100	Xenopus_tropicalis
ENSMUSG00000053286	Trmt1l	80	61.499	ENSXCOG00000007372	trmt1l	91	61.499	Xiphophorus_couchianus
ENSMUSG00000053286	Trmt1l	92	57.749	ENSXMAG00000003575	trmt1l	97	61.745	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	-	IEA	Function
GO:0002940	tRNA N2-guanine methylation	21873635.	IBA	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0004809	tRNA (guanine-N2-)-methyltransferase activity	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0007610	behavior	-	IEA	Process
GO:0008033	tRNA processing	-	IEA	Process
GO:0008168	methyltransferase activity	-	IEA	Function
GO:0008344	adult locomotory behavior	17198746.	IMP	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0030534	adult behavior	17198746.	IMP	Process
GO:0032259	methylation	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function