EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000053289 (Gene tree)
Gene ID: 77591
Gene Symbol: Ddx10
Alias: 4632415A01Rik
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 10
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 149419 bases
Position: chr9:53098635-53248053
Accession: 1924841
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000065198	ResIII	PF04851.15	6.3e-10	1	1
ENSMUSP00000065198	DEAD	PF00270.29	1.8e-48	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000065630	-	3128	-	ENSMUSP00000065198	875 (aa)	-	Q80Y44

Gene Model

Click here to download ENSMUSG00000053289's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000053289's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000053289	Ddx10	50	46.241	ENSMUSG00000001674	Ddx18	66	46.241
ENSMUSG00000053289	Ddx10	50	38.631	ENSMUSG00000029389	Ddx55	75	38.631

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000053289	Ddx10	100	84.642	ENSG00000178105	DDX10	100	84.642	Homo_sapiens
ENSMUSG00000053289	Ddx10	84	77.778	ENSAPOG00000009242	ddx10	60	77.866	Acanthochromis_polyacanthus
ENSMUSG00000053289	Ddx10	100	84.000	ENSAMEG00000009232	DDX10	100	84.743	Ailuropoda_melanoleuca
ENSMUSG00000053289	Ddx10	57	77.092	ENSACIG00000012927	ddx10	60	76.680	Amphilophus_citrinellus
ENSMUSG00000053289	Ddx10	58	77.579	ENSAOCG00000021917	ddx10	60	77.668	Amphiprion_ocellaris
ENSMUSG00000053289	Ddx10	84	77.579	ENSAPEG00000022230	ddx10	60	77.668	Amphiprion_percula
ENSMUSG00000053289	Ddx10	58	76.482	ENSATEG00000007227	ddx10	60	76.482	Anabas_testudineus
ENSMUSG00000053289	Ddx10	84	67.596	ENSAPLG00000011942	DDX10	99	68.526	Anas_platyrhynchos
ENSMUSG00000053289	Ddx10	86	69.221	ENSACAG00000005173	DDX10	99	68.734	Anolis_carolinensis
ENSMUSG00000053289	Ddx10	100	84.104	ENSANAG00000020864	DDX10	100	83.878	Aotus_nancymaae
ENSMUSG00000053289	Ddx10	57	77.291	ENSACLG00000003559	ddx10	59	76.877	Astatotilapia_calliptera
ENSMUSG00000053289	Ddx10	78	75.644	ENSAMXG00000006135	ddx10	78	75.644	Astyanax_mexicanus
ENSMUSG00000053289	Ddx10	100	84.932	ENSBTAG00000002382	DDX10	100	84.932	Bos_taurus
ENSMUSG00000053289	Ddx10	52	53.659	WBGene00021277	Y23H5B.6	63	52.916	Caenorhabditis_elegans
ENSMUSG00000053289	Ddx10	100	83.941	ENSCJAG00000010281	DDX10	100	83.827	Callithrix_jacchus
ENSMUSG00000053289	Ddx10	100	84.607	ENSCAFG00000014324	DDX10	100	84.835	Canis_familiaris
ENSMUSG00000053289	Ddx10	100	84.607	ENSCAFG00020007058	DDX10	100	84.835	Canis_lupus_dingo
ENSMUSG00000053289	Ddx10	100	85.308	ENSCHIG00000015147	DDX10	100	85.308	Capra_hircus
ENSMUSG00000053289	Ddx10	100	80.866	ENSTSYG00000003184	DDX10	100	80.752	Carlito_syrichta
ENSMUSG00000053289	Ddx10	100	80.616	ENSCPOG00000000865	DDX10	100	81.072	Cavia_porcellus
ENSMUSG00000053289	Ddx10	100	84.633	ENSCCAG00000024209	DDX10	100	84.407	Cebus_capucinus
ENSMUSG00000053289	Ddx10	100	85.845	ENSCATG00000028487	DDX10	100	86.187	Cercocebus_atys
ENSMUSG00000053289	Ddx10	100	65.411	ENSCATG00000040297	-	100	65.639	Cercocebus_atys
ENSMUSG00000053289	Ddx10	100	85.405	ENSCLAG00000013463	DDX10	100	85.405	Chinchilla_lanigera
ENSMUSG00000053289	Ddx10	88	95.701	ENSCSAG00000002948	DDX10	93	95.701	Chlorocebus_sabaeus
ENSMUSG00000053289	Ddx10	93	85.504	ENSCHOG00000001537	DDX10	93	85.504	Choloepus_hoffmanni
ENSMUSG00000053289	Ddx10	63	77.978	ENSCPBG00000021681	DDX10	97	67.616	Chrysemys_picta_bellii
ENSMUSG00000053289	Ddx10	68	60.132	ENSCING00000021618	-	89	56.031	Ciona_intestinalis
ENSMUSG00000053289	Ddx10	51	61.333	ENSCSAVG00000003023	-	88	56.917	Ciona_savignyi
ENSMUSG00000053289	Ddx10	87	79.153	ENSCANG00000038108	-	95	79.153	Colobus_angolensis_palliatus
ENSMUSG00000053289	Ddx10	100	85.731	ENSCANG00000027716	DDX10	100	86.187	Colobus_angolensis_palliatus
ENSMUSG00000053289	Ddx10	100	91.230	ENSCGRG00001007099	Ddx10	100	92.027	Cricetulus_griseus_chok1gshd
ENSMUSG00000053289	Ddx10	100	91.230	ENSCGRG00000000153	Ddx10	100	92.027	Cricetulus_griseus_crigri
ENSMUSG00000053289	Ddx10	75	76.015	ENSCSEG00000002080	ddx10	66	76.015	Cynoglossus_semilaevis
ENSMUSG00000053289	Ddx10	90	68.909	ENSCVAG00000000109	ddx10	98	68.773	Cyprinodon_variegatus
ENSMUSG00000053289	Ddx10	58	75.294	ENSDARG00000061865	ddx10	59	75.490	Danio_rerio
ENSMUSG00000053289	Ddx10	75	82.602	ENSDNOG00000012542	DDX10	99	82.753	Dasypus_novemcinctus
ENSMUSG00000053289	Ddx10	100	76.055	ENSDORG00000014459	Ddx10	100	76.055	Dipodomys_ordii
ENSMUSG00000053289	Ddx10	56	54.076	FBgn0030855	CG5800	61	54.076	Drosophila_melanogaster
ENSMUSG00000053289	Ddx10	93	61.741	ENSETEG00000005526	DDX10	93	61.741	Echinops_telfairi
ENSMUSG00000053289	Ddx10	81	69.548	ENSEBUG00000007794	ddx10	88	69.548	Eptatretus_burgeri
ENSMUSG00000053289	Ddx10	100	86.400	ENSEASG00005010110	DDX10	100	86.514	Equus_asinus_asinus
ENSMUSG00000053289	Ddx10	100	86.171	ENSECAG00000010355	DDX10	100	86.286	Equus_caballus
ENSMUSG00000053289	Ddx10	100	73.660	ENSEEUG00000011164	DDX10	100	73.546	Erinaceus_europaeus
ENSMUSG00000053289	Ddx10	58	75.692	ENSELUG00000014515	ddx10	60	74.903	Esox_lucius
ENSMUSG00000053289	Ddx10	100	85.291	ENSFCAG00000007246	DDX10	100	85.633	Felis_catus
ENSMUSG00000053289	Ddx10	85	64.837	ENSFALG00000000449	DDX10	98	64.351	Ficedula_albicollis
ENSMUSG00000053289	Ddx10	99	55.479	ENSFHEG00000011340	ddx10	91	73.837	Fundulus_heteroclitus
ENSMUSG00000053289	Ddx10	86	75.296	ENSGAFG00000011210	ddx10	89	75.296	Gambusia_affinis
ENSMUSG00000053289	Ddx10	99	58.495	ENSGACG00000002948	ddx10	63	74.517	Gasterosteus_aculeatus
ENSMUSG00000053289	Ddx10	99	64.892	ENSGAGG00000023967	DDX10	99	66.415	Gopherus_agassizii
ENSMUSG00000053289	Ddx10	67	84.014	ENSGGOG00000043387	-	95	84.014	Gorilla_gorilla
ENSMUSG00000053289	Ddx10	99	73.112	ENSGGOG00000043095	-	100	72.883	Gorilla_gorilla
ENSMUSG00000053289	Ddx10	100	84.703	ENSGGOG00000000271	-	100	84.703	Gorilla_gorilla
ENSMUSG00000053289	Ddx10	100	82.708	ENSHGLG00000013439	DDX10	100	82.821	Heterocephalus_glaber_female
ENSMUSG00000053289	Ddx10	75	88.298	ENSHGLG00100003298	DDX10	94	88.450	Heterocephalus_glaber_male
ENSMUSG00000053289	Ddx10	58	76.482	ENSHCOG00000010943	ddx10	62	76.482	Hippocampus_comes
ENSMUSG00000053289	Ddx10	50	45.786	ENSIPUG00000012876	ddx18	75	45.786	Ictalurus_punctatus
ENSMUSG00000053289	Ddx10	59	73.796	ENSIPUG00000024738	ddx10	98	55.913	Ictalurus_punctatus
ENSMUSG00000053289	Ddx10	75	87.709	ENSSTOG00000005213	DDX10	97	87.709	Ictidomys_tridecemlineatus
ENSMUSG00000053289	Ddx10	93	84.172	ENSJJAG00000014261	Ddx10	96	84.417	Jaculus_jaculus
ENSMUSG00000053289	Ddx10	84	75.149	ENSKMAG00000001578	ddx10	90	75.149	Kryptolebias_marmoratus
ENSMUSG00000053289	Ddx10	87	74.806	ENSLBEG00000011602	ddx10	94	74.710	Labrus_bergylta
ENSMUSG00000053289	Ddx10	58	77.273	ENSLOCG00000002074	ddx10	98	64.295	Lepisosteus_oculatus
ENSMUSG00000053289	Ddx10	100	84.914	ENSLAFG00000005951	DDX10	100	84.914	Loxodonta_africana
ENSMUSG00000053289	Ddx10	100	63.584	ENSMFAG00000042969	-	100	63.699	Macaca_fascicularis
ENSMUSG00000053289	Ddx10	100	86.187	ENSMFAG00000045808	DDX10	91	86.187	Macaca_fascicularis
ENSMUSG00000053289	Ddx10	100	85.616	ENSMMUG00000014415	DDX10	100	85.959	Macaca_mulatta
ENSMUSG00000053289	Ddx10	100	63.014	ENSMMUG00000016025	-	100	63.014	Macaca_mulatta
ENSMUSG00000053289	Ddx10	100	62.329	ENSMNEG00000039588	-	100	62.329	Macaca_nemestrina
ENSMUSG00000053289	Ddx10	100	85.616	ENSMNEG00000033513	DDX10	100	85.959	Macaca_nemestrina
ENSMUSG00000053289	Ddx10	100	85.177	ENSMLEG00000044081	DDX10	100	85.861	Mandrillus_leucophaeus
ENSMUSG00000053289	Ddx10	100	63.356	ENSMLEG00000035477	-	100	63.584	Mandrillus_leucophaeus
ENSMUSG00000053289	Ddx10	57	77.291	ENSMAMG00000022111	ddx10	58	77.291	Mastacembelus_armatus
ENSMUSG00000053289	Ddx10	57	77.291	ENSMZEG00005003586	ddx10	59	76.877	Maylandia_zebra
ENSMUSG00000053289	Ddx10	54	82.911	ENSMGAG00000015145	DDX10	99	71.475	Meleagris_gallopavo
ENSMUSG00000053289	Ddx10	100	85.257	ENSMICG00000035071	DDX10	100	85.257	Microcebus_murinus
ENSMUSG00000053289	Ddx10	100	92.922	ENSMOCG00000009915	Ddx10	100	92.808	Microtus_ochrogaster
ENSMUSG00000053289	Ddx10	99	74.627	ENSMODG00000014600	DDX10	96	74.627	Monodelphis_domestica
ENSMUSG00000053289	Ddx10	82	78.351	ENSMALG00000021441	ddx10	89	78.512	Monopterus_albus
ENSMUSG00000053289	Ddx10	100	96.914	MGP_CAROLIEiJ_G0032212	Ddx10	100	96.914	Mus_caroli
ENSMUSG00000053289	Ddx10	100	96.229	MGP_PahariEiJ_G0015080	Ddx10	100	96.229	Mus_pahari
ENSMUSG00000053289	Ddx10	100	98.514	MGP_SPRETEiJ_G0033352	Ddx10	100	98.514	Mus_spretus
ENSMUSG00000053289	Ddx10	100	85.829	ENSMPUG00000005921	DDX10	100	85.829	Mustela_putorius_furo
ENSMUSG00000053289	Ddx10	75	83.333	ENSMLUG00000001645	DDX10	98	83.030	Myotis_lucifugus
ENSMUSG00000053289	Ddx10	100	89.384	ENSNGAG00000010526	Ddx10	100	89.384	Nannospalax_galili
ENSMUSG00000053289	Ddx10	58	77.075	ENSNBRG00000016684	ddx10	60	77.075	Neolamprologus_brichardi
ENSMUSG00000053289	Ddx10	100	84.932	ENSNLEG00000007242	DDX10	100	85.274	Nomascus_leucogenys
ENSMUSG00000053289	Ddx10	93	65.239	ENSOPRG00000004266	DDX10	100	65.116	Ochotona_princeps
ENSMUSG00000053289	Ddx10	58	76.877	ENSONIG00000007263	ddx10	55	76.877	Oreochromis_niloticus
ENSMUSG00000053289	Ddx10	73	75.504	ENSOANG00000006243	DDX10	99	74.012	Ornithorhynchus_anatinus
ENSMUSG00000053289	Ddx10	100	85.143	ENSOCUG00000003843	DDX10	100	85.143	Oryctolagus_cuniculus
ENSMUSG00000053289	Ddx10	99	57.478	ENSORLG00000003073	ddx10	64	72.556	Oryzias_latipes
ENSMUSG00000053289	Ddx10	56	76.955	ENSORLG00015002672	ddx10	64	72.932	Oryzias_latipes_hsok
ENSMUSG00000053289	Ddx10	59	73.106	ENSOMEG00000007443	ddx10	64	72.744	Oryzias_melastigma
ENSMUSG00000053289	Ddx10	75	84.802	ENSOGAG00000010962	DDX10	98	84.650	Otolemur_garnettii
ENSMUSG00000053289	Ddx10	75	85.090	ENSOARG00000012714	DDX10	99	85.241	Ovis_aries
ENSMUSG00000053289	Ddx10	99	72.883	ENSPPAG00000032506	-	100	73.112	Pan_paniscus
ENSMUSG00000053289	Ddx10	100	84.773	ENSPPAG00000035222	DDX10	100	84.773	Pan_paniscus
ENSMUSG00000053289	Ddx10	100	85.291	ENSPPRG00000005990	DDX10	100	85.633	Panthera_pardus
ENSMUSG00000053289	Ddx10	93	85.521	ENSPTIG00000010152	DDX10	93	85.890	Panthera_tigris_altaica
ENSMUSG00000053289	Ddx10	100	84.642	ENSPTRG00000004256	DDX10	100	84.869	Pan_troglodytes
ENSMUSG00000053289	Ddx10	99	73.341	ENSPTRG00000047351	-	100	72.769	Pan_troglodytes
ENSMUSG00000053289	Ddx10	100	85.405	ENSPANG00000015325	DDX10	100	86.089	Papio_anubis
ENSMUSG00000053289	Ddx10	100	69.521	ENSPANG00000029813	-	100	69.749	Papio_anubis
ENSMUSG00000053289	Ddx10	99	56.428	ENSPKIG00000015739	ddx10	99	56.477	Paramormyrops_kingsleyae
ENSMUSG00000053289	Ddx10	90	67.298	ENSPSIG00000014874	DDX10	99	73.445	Pelodiscus_sinensis
ENSMUSG00000053289	Ddx10	84	77.291	ENSPMGG00000008344	ddx10	62	77.291	Periophthalmus_magnuspinnatus
ENSMUSG00000053289	Ddx10	100	84.187	ENSPEMG00000017492	Ddx10	100	83.523	Peromyscus_maniculatus_bairdii
ENSMUSG00000053289	Ddx10	98	75.949	ENSPCIG00000003013	DDX10	99	89.871	Phascolarctos_cinereus
ENSMUSG00000053289	Ddx10	86	74.901	ENSPFOG00000013021	ddx10	89	74.901	Poecilia_formosa
ENSMUSG00000053289	Ddx10	86	74.901	ENSPLAG00000009048	ddx10	89	74.901	Poecilia_latipinna
ENSMUSG00000053289	Ddx10	86	75.099	ENSPMEG00000004541	ddx10	89	75.099	Poecilia_mexicana
ENSMUSG00000053289	Ddx10	86	75.494	ENSPREG00000019559	ddx10	89	75.494	Poecilia_reticulata
ENSMUSG00000053289	Ddx10	100	85.160	ENSPPYG00000003849	DDX10	100	85.502	Pongo_abelii
ENSMUSG00000053289	Ddx10	100	69.362	ENSPCAG00000012949	DDX10	100	69.134	Procavia_capensis
ENSMUSG00000053289	Ddx10	92	84.247	ENSPCOG00000020289	DDX10	100	84.247	Propithecus_coquereli
ENSMUSG00000053289	Ddx10	100	79.408	ENSPVAG00000007371	DDX10	100	80.205	Pteropus_vampyrus
ENSMUSG00000053289	Ddx10	57	77.291	ENSPNYG00000001756	ddx10	60	76.877	Pundamilia_nyererei
ENSMUSG00000053289	Ddx10	55	77.871	ENSPNAG00000017154	ddx10	60	76.031	Pygocentrus_nattereri
ENSMUSG00000053289	Ddx10	100	94.971	ENSRNOG00000012500	Ddx10	100	94.857	Rattus_norvegicus
ENSMUSG00000053289	Ddx10	100	62.870	ENSRBIG00000038689	-	98	62.756	Rhinopithecus_bieti
ENSMUSG00000053289	Ddx10	100	81.984	ENSRBIG00000040612	DDX10	100	82.668	Rhinopithecus_bieti
ENSMUSG00000053289	Ddx10	100	85.519	ENSRROG00000031744	DDX10	100	86.203	Rhinopithecus_roxellana
ENSMUSG00000053289	Ddx10	51	54.343	YJL033W	HCA4	58	54.343	Saccharomyces_cerevisiae
ENSMUSG00000053289	Ddx10	100	82.020	ENSSBOG00000022735	DDX10	100	82.131	Saimiri_boliviensis_boliviensis
ENSMUSG00000053289	Ddx10	99	59.570	ENSSFOG00015007982	ddx10	61	74.324	Scleropages_formosus
ENSMUSG00000053289	Ddx10	60	73.896	ENSSMAG00000018735	ddx10	62	73.896	Scophthalmus_maximus
ENSMUSG00000053289	Ddx10	59	74.664	ENSSDUG00000018245	ddx10	62	74.664	Seriola_dumerili
ENSMUSG00000053289	Ddx10	58	76.285	ENSSLDG00000012041	ddx10	62	74.856	Seriola_lalandi_dorsalis
ENSMUSG00000053289	Ddx10	78	94.231	ENSSARG00000004103	DDX10	78	94.231	Sorex_araneus
ENSMUSG00000053289	Ddx10	85	66.842	ENSSPUG00000017612	DDX10	89	67.546	Sphenodon_punctatus
ENSMUSG00000053289	Ddx10	58	77.273	ENSSPAG00000015548	ddx10	83	77.273	Stegastes_partitus
ENSMUSG00000053289	Ddx10	93	66.108	ENSTGUG00000012605	DDX10	100	65.150	Taeniopygia_guttata
ENSMUSG00000053289	Ddx10	56	76.065	ENSTRUG00000010881	ddx10	61	74.951	Takifugu_rubripes
ENSMUSG00000053289	Ddx10	96	59.693	ENSTNIG00000010477	ddx10	63	74.609	Tetraodon_nigroviridis
ENSMUSG00000053289	Ddx10	85	78.846	ENSTBEG00000006321	DDX10	91	78.846	Tupaia_belangeri
ENSMUSG00000053289	Ddx10	100	75.626	ENSTTRG00000006068	DDX10	100	75.740	Tursiops_truncatus
ENSMUSG00000053289	Ddx10	57	96.208	ENSUAMG00000014176	DDX10	100	96.208	Ursus_americanus
ENSMUSG00000053289	Ddx10	93	85.784	ENSUMAG00000007300	DDX10	98	85.784	Ursus_maritimus
ENSMUSG00000053289	Ddx10	92	84.099	ENSVPAG00000010185	DDX10	100	84.099	Vicugna_pacos
ENSMUSG00000053289	Ddx10	100	84.721	ENSVVUG00000015484	DDX10	100	84.835	Vulpes_vulpes
ENSMUSG00000053289	Ddx10	69	69.193	ENSXETG00000014458	ddx10	85	69.368	Xenopus_tropicalis
ENSMUSG00000053289	Ddx10	87	73.888	ENSXCOG00000003080	ddx10	92	73.888	Xiphophorus_couchianus
ENSMUSG00000053289	Ddx10	86	74.901	ENSXMAG00000016515	ddx10	89	74.901	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0016787	hydrolase activity	-	IEA	Function
GO:0097065	anterior head development	26234751.	IMP	Process