EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000053453 (Gene tree)
Gene ID
66231
Gene Symbol
Thoc7
Alias
1500006O09Rik|9230101K24Rik
Full Name
THO complex 7
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Minus strand
Length
12841 bases
Position
chr14:13949012-13961852
Accession
1913481
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000153123THOC7PF05615.132.3e-4011
ENSMUSP00000065819THOC7PF05615.132.5e-4011
ENSMUSP00000153560THOC7PF05615.131.5e-3311
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27768875High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem CellsnIC & mESC2016.09He CDOI: 10.1016/j.molcel.2016.09.034
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000225202-741--- (aa)--
ENSMUST00000223832-1918-ENSMUSP0000015298366 (aa)-A0A286YCW5
ENSMUST00000225317-706--- (aa)--
ENSMUST00000225325-765XM_006518077ENSMUSP00000153123200 (aa)XP_006518140A0A286YCS0
ENSMUST00000224764-5264--- (aa)--
ENSMUST00000225891-512-ENSMUSP00000153560169 (aa)-A0A286YDT0
ENSMUST00000224015-844--- (aa)--
ENSMUST00000224392-424--- (aa)--
ENSMUST00000065865-937XM_006518076ENSMUSP00000065819204 (aa)XP_006518139Q7TMY4
ENSMUST00000225590-707-ENSMUSP00000153276106 (aa)-A0A286YD48
ENSMUST00000224652-617--- (aa)--
ENSMUST00000225559-454-ENSMUSP00000153618122 (aa)-A0A286YEA7
ENSMUST00000226008-436--- (aa)--
ENSMUST00000225401-951--- (aa)--
Gene Model
Click here to download ENSMUSG00000053453's gene model file
Pathways
Pathway IDPathway NameSource
mmu03013RNA transportKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000053453's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000053453Thoc710097.549ENSG00000163634THOC7100100.000Homo_sapiens
ENSMUSG00000053453Thoc710078.771ENSAPOG00000009523thoc79781.218Acanthochromis_polyacanthus
ENSMUSG00000053453Thoc79799.153ENSAMEG00000015287THOC79796.970Ailuropoda_melanoleuca
ENSMUSG00000053453Thoc79782.353ENSACIG00000008742thoc79082.703Amphilophus_citrinellus
ENSMUSG00000053453Thoc710078.771ENSAOCG00000006925thoc79980.500Amphiprion_ocellaris
ENSMUSG00000053453Thoc710078.771ENSAPEG00000001653thoc79382.162Amphiprion_percula
ENSMUSG00000053453Thoc710079.888ENSATEG00000018422thoc79980.500Anabas_testudineus
ENSMUSG00000053453Thoc79795.000ENSAPLG00000003317THOC79890.955Anas_platyrhynchos
ENSMUSG00000053453Thoc79794.915ENSACAG00000001152THOC79989.655Anolis_carolinensis
ENSMUSG00000053453Thoc710097.059ENSANAG00000030433THOC79996.970Aotus_nancymaae
ENSMUSG00000053453Thoc79782.353ENSACLG00000015413thoc79980.500Astatotilapia_calliptera
ENSMUSG00000053453Thoc710078.771ENSAMXG00000014367thoc79978.500Astyanax_mexicanus
ENSMUSG00000053453Thoc710097.549ENSBTAG00000032872THOC710097.549Bos_taurus
ENSMUSG00000053453Thoc710097.059ENSCJAG00000034899-10097.059Callithrix_jacchus
ENSMUSG00000053453Thoc710093.137ENSCJAG00000022907-10093.137Callithrix_jacchus
ENSMUSG00000053453Thoc797100.000ENSCAFG00000006867THOC710095.939Canis_familiaris
ENSMUSG00000053453Thoc797100.000ENSCAFG00020010785THOC710096.078Canis_lupus_dingo
ENSMUSG00000053453Thoc797100.000ENSCHIG00000018603THOC710096.078Capra_hircus
ENSMUSG00000053453Thoc710097.059ENSTSYG00000013055THOC710097.059Carlito_syrichta
ENSMUSG00000053453Thoc79986.567ENSCAPG00000009089THOC710084.541Cavia_aperea
ENSMUSG00000053453Thoc797100.000ENSCPOG00000007930THOC710096.569Cavia_porcellus
ENSMUSG00000053453Thoc710097.059ENSCCAG00000001638THOC710097.059Cebus_capucinus
ENSMUSG00000053453Thoc710097.059ENSCATG00000038732THOC710097.059Cercocebus_atys
ENSMUSG00000053453Thoc797100.000ENSCLAG00000000664THOC710097.462Chinchilla_lanigera
ENSMUSG00000053453Thoc710097.059ENSCSAG00000011986THOC710097.059Chlorocebus_sabaeus
ENSMUSG00000053453Thoc77883.333ENSCHOG00000012170THOC710082.278Choloepus_hoffmanni
ENSMUSG00000053453Thoc77595.238ENSCPBG00000026834THOC79990.728Chrysemys_picta_bellii
ENSMUSG00000053453Thoc79847.399ENSCING00000015312-9645.098Ciona_intestinalis
ENSMUSG00000053453Thoc79847.399ENSCSAVG00000010669-9945.274Ciona_savignyi
ENSMUSG00000053453Thoc797100.000ENSCANG00000028301THOC710097.462Colobus_angolensis_palliatus
ENSMUSG00000053453Thoc710099.510ENSCGRG00001014815Thoc710099.510Cricetulus_griseus_chok1gshd
ENSMUSG00000053453Thoc79999.495ENSCGRG00000014860Thoc710099.495Cricetulus_griseus_crigri
ENSMUSG00000053453Thoc710077.966ENSCSEG00000005643thoc79379.679Cynoglossus_semilaevis
ENSMUSG00000053453Thoc79783.193ENSCVAG00000008059thoc79781.218Cyprinodon_variegatus
ENSMUSG00000053453Thoc710076.536ENSDARG00000015394thoc79978.000Danio_rerio
ENSMUSG00000053453Thoc79861.538ENSDNOG00000047257-9161.538Dasypus_novemcinctus
ENSMUSG00000053453Thoc710097.059ENSDNOG00000005917-10097.059Dasypus_novemcinctus
ENSMUSG00000053453Thoc79791.525ENSDORG00000009225-9989.418Dipodomys_ordii
ENSMUSG00000053453Thoc79799.153ENSDORG00000028787-10089.848Dipodomys_ordii
ENSMUSG00000053453Thoc79840.805FBgn0035110thoc76939.394Drosophila_melanogaster
ENSMUSG00000053453Thoc79984.772ENSETEG00000015076THOC710084.772Echinops_telfairi
ENSMUSG00000053453Thoc710063.687ENSEBUG00000006746thoc79862.927Eptatretus_burgeri
ENSMUSG00000053453Thoc797100.000ENSEASG00005001507THOC79997.970Equus_asinus_asinus
ENSMUSG00000053453Thoc710098.039ENSECAG00000000497THOC710098.039Equus_caballus
ENSMUSG00000053453Thoc797100.000ENSEEUG00000015161THOC79992.893Erinaceus_europaeus
ENSMUSG00000053453Thoc79882.000ENSELUG00000007905thoc79982.000Esox_lucius
ENSMUSG00000053453Thoc797100.000ENSFCAG00000023008THOC710096.569Felis_catus
ENSMUSG00000053453Thoc79796.610ENSFALG00000013245THOC79891.878Ficedula_albicollis
ENSMUSG00000053453Thoc79799.153ENSFDAG00000016387THOC710095.431Fukomys_damarensis
ENSMUSG00000053453Thoc79782.353ENSFHEG00000004406thoc79979.500Fundulus_heteroclitus
ENSMUSG00000053453Thoc79777.311ENSGMOG00000009111thoc79976.684Gadus_morhua
ENSMUSG00000053453Thoc79796.610ENSGALG00000007299THOC79992.611Gallus_gallus
ENSMUSG00000053453Thoc710076.796ENSGACG00000009218thoc79976.214Gasterosteus_aculeatus
ENSMUSG00000053453Thoc79797.458ENSGAGG00000008038THOC79993.103Gopherus_agassizii
ENSMUSG00000053453Thoc797100.000ENSGGOG00000024282THOC710097.462Gorilla_gorilla
ENSMUSG00000053453Thoc79783.193ENSHBUG00000004070thoc79981.000Haplochromis_burtoni
ENSMUSG00000053453Thoc79799.153ENSHGLG00000002165THOC710096.078Heterocephalus_glaber_female
ENSMUSG00000053453Thoc79978.788ENSHGLG00000015921-10077.561Heterocephalus_glaber_female
ENSMUSG00000053453Thoc79972.772ENSHGLG00000003232-10072.772Heterocephalus_glaber_female
ENSMUSG00000053453Thoc79972.772ENSHGLG00100018265-10072.772Heterocephalus_glaber_male
ENSMUSG00000053453Thoc79978.788ENSHGLG00100017070-10077.561Heterocephalus_glaber_male
ENSMUSG00000053453Thoc79799.153ENSHGLG00100007183-10095.939Heterocephalus_glaber_male
ENSMUSG00000053453Thoc710075.419ENSHCOG00000013910thoc79776.650Hippocampus_comes
ENSMUSG00000053453Thoc77577.778ENSHCOG00000014078thoc79675.000Hippocampus_comes
ENSMUSG00000053453Thoc710076.536ENSIPUG00000023494thoc79976.500Ictalurus_punctatus
ENSMUSG00000053453Thoc797100.000ENSSTOG00000012552THOC79997.980Ictidomys_tridecemlineatus
ENSMUSG00000053453Thoc79779.661ENSJJAG00000018503-9080.645Jaculus_jaculus
ENSMUSG00000053453Thoc797100.000ENSJJAG00000016662-10095.431Jaculus_jaculus
ENSMUSG00000053453Thoc79782.353ENSKMAG00000009670thoc79980.000Kryptolebias_marmoratus
ENSMUSG00000053453Thoc79781.513ENSLBEG00000025612thoc79977.228Labrus_bergylta
ENSMUSG00000053453Thoc79791.525ENSLACG00000003527THOC79987.562Latimeria_chalumnae
ENSMUSG00000053453Thoc79982.587ENSLOCG00000010342thoc79882.587Lepisosteus_oculatus
ENSMUSG00000053453Thoc797100.000ENSLAFG00000001987THOC79995.522Loxodonta_africana
ENSMUSG00000053453Thoc710097.059ENSMFAG00000032653THOC710097.059Macaca_fascicularis
ENSMUSG00000053453Thoc797100.000ENSMMUG00000012783THOC710096.020Macaca_mulatta
ENSMUSG00000053453Thoc710097.059ENSMNEG00000035012THOC710097.059Macaca_nemestrina
ENSMUSG00000053453Thoc797100.000ENSMLEG00000041263THOC710096.954Mandrillus_leucophaeus
ENSMUSG00000053453Thoc79782.353ENSMAMG00000019803thoc79982.609Mastacembelus_armatus
ENSMUSG00000053453Thoc79782.353ENSMZEG00005011996thoc79980.500Maylandia_zebra
ENSMUSG00000053453Thoc77893.284ENSMGAG00000009059THOC79989.308Meleagris_gallopavo
ENSMUSG00000053453Thoc79998.985ENSMAUG00000002228Thoc710098.985Mesocricetus_auratus
ENSMUSG00000053453Thoc797100.000ENSMICG00000045229THOC79995.567Microcebus_murinus
ENSMUSG00000053453Thoc710097.549ENSMOCG00000019446Thoc710097.549Microtus_ochrogaster
ENSMUSG00000053453Thoc79781.513ENSMMOG00000000777thoc710080.541Mola_mola
ENSMUSG00000053453Thoc79797.458ENSMODG00000003009THOC79593.596Monodelphis_domestica
ENSMUSG00000053453Thoc710099.510MGP_CAROLIEiJ_G0018957Thoc710099.510Mus_caroli
ENSMUSG00000053453Thoc710099.510MGP_PahariEiJ_G0029971Thoc710099.510Mus_pahari
ENSMUSG00000053453Thoc7100100.000MGP_SPRETEiJ_G0019833Thoc7100100.000Mus_spretus
ENSMUSG00000053453Thoc79982.090ENSMPUG00000016928THOC79982.090Mustela_putorius_furo
ENSMUSG00000053453Thoc797100.000ENSMLUG00000012060-9997.475Myotis_lucifugus
ENSMUSG00000053453Thoc79794.915ENSMLUG00000003510-9892.386Myotis_lucifugus
ENSMUSG00000053453Thoc77368.293ENSNGAG00000001946-8965.101Nannospalax_galili
ENSMUSG00000053453Thoc710084.302ENSNGAG00000010425-10082.412Nannospalax_galili
ENSMUSG00000053453Thoc797100.000ENSNGAG00000022918-9995.545Nannospalax_galili
ENSMUSG00000053453Thoc79783.193ENSNBRG00000020675thoc79981.000Neolamprologus_brichardi
ENSMUSG00000053453Thoc710097.549ENSNLEG00000011760THOC710097.549Nomascus_leucogenys
ENSMUSG00000053453Thoc75792.708ENSMEUG00000006342THOC710087.705Notamacropus_eugenii
ENSMUSG00000053453Thoc797100.000ENSOPRG00000016403THOC710096.447Ochotona_princeps
ENSMUSG00000053453Thoc79799.153ENSODEG00000000426THOC710096.447Octodon_degus
ENSMUSG00000053453Thoc79783.193ENSONIG00000020361thoc79981.000Oreochromis_niloticus
ENSMUSG00000053453Thoc77593.750ENSOANG00000015693THOC79989.542Ornithorhynchus_anatinus
ENSMUSG00000053453Thoc797100.000ENSOCUG00000021860-10094.118Oryctolagus_cuniculus
ENSMUSG00000053453Thoc79791.525ENSOCUG00000009136-10086.765Oryctolagus_cuniculus
ENSMUSG00000053453Thoc79783.193ENSORLG00000008192thoc78781.218Oryzias_latipes
ENSMUSG00000053453Thoc79783.193ENSORLG00020009776thoc78781.218Oryzias_latipes_hni
ENSMUSG00000053453Thoc79783.193ENSORLG00015005198thoc79781.218Oryzias_latipes_hsok
ENSMUSG00000053453Thoc79783.193ENSOMEG00000005739thoc79781.218Oryzias_melastigma
ENSMUSG00000053453Thoc797100.000ENSOGAG00000024865THOC710096.569Otolemur_garnettii
ENSMUSG00000053453Thoc797100.000ENSOARG00000011396THOC710097.475Ovis_aries
ENSMUSG00000053453Thoc710097.549ENSPPAG00000044086THOC710097.549Pan_paniscus
ENSMUSG00000053453Thoc797100.000ENSPPRG00000004022THOC79796.447Panthera_pardus
ENSMUSG00000053453Thoc797100.000ENSPTIG00000010860THOC710095.395Panthera_tigris_altaica
ENSMUSG00000053453Thoc710097.549ENSPTRG00000015076THOC710097.549Pan_troglodytes
ENSMUSG00000053453Thoc710097.059ENSPANG00000009531THOC710097.059Papio_anubis
ENSMUSG00000053453Thoc79882.000ENSPKIG00000023365thoc79982.000Paramormyrops_kingsleyae
ENSMUSG00000053453Thoc77595.238ENSPSIG00000002810THOC79990.066Pelodiscus_sinensis
ENSMUSG00000053453Thoc79781.513ENSPMGG00000001140thoc79673.171Periophthalmus_magnuspinnatus
ENSMUSG00000053453Thoc799100.000ENSPEMG00000000620Thoc7100100.000Peromyscus_maniculatus_bairdii
ENSMUSG00000053453Thoc710072.283ENSPMAG00000001319thoc79970.192Petromyzon_marinus
ENSMUSG00000053453Thoc79797.458ENSPCIG00000012736THOC710093.627Phascolarctos_cinereus
ENSMUSG00000053453Thoc79782.353ENSPFOG00000010233thoc79781.218Poecilia_formosa
ENSMUSG00000053453Thoc79782.353ENSPLAG00000002693thoc79781.218Poecilia_latipinna
ENSMUSG00000053453Thoc710078.771ENSPMEG00000023493thoc79780.711Poecilia_mexicana
ENSMUSG00000053453Thoc710078.771ENSPREG00000018772thoc79780.711Poecilia_reticulata
ENSMUSG00000053453Thoc797100.000ENSPPYG00000013746THOC79196.517Pongo_abelii
ENSMUSG00000053453Thoc79789.831ENSPCAG00000006143THOC710090.769Procavia_capensis
ENSMUSG00000053453Thoc710097.059ENSPCOG00000022000-10097.059Propithecus_coquereli
ENSMUSG00000053453Thoc79798.305ENSPCOG00000011923-10095.098Propithecus_coquereli
ENSMUSG00000053453Thoc79799.153ENSPVAG00000012310THOC79795.455Pteropus_vampyrus
ENSMUSG00000053453Thoc79783.193ENSPNYG00000001260thoc79981.000Pundamilia_nyererei
ENSMUSG00000053453Thoc710078.212ENSPNAG00000003038thoc79978.000Pygocentrus_nattereri
ENSMUSG00000053453Thoc710099.020ENSRNOG00000007701Thoc710099.020Rattus_norvegicus
ENSMUSG00000053453Thoc710083.333ENSRBIG00000033497THOC710083.333Rhinopithecus_bieti
ENSMUSG00000053453Thoc710097.549ENSRROG00000008884THOC710097.549Rhinopithecus_roxellana
ENSMUSG00000053453Thoc797100.000ENSSBOG00000021884THOC79996.535Saimiri_boliviensis_boliviensis
ENSMUSG00000053453Thoc79797.458ENSSHAG00000011615THOC710090.686Sarcophilus_harrisii
ENSMUSG00000053453Thoc710082.584ENSSFOG00015018204thoc79983.920Scleropages_formosus
ENSMUSG00000053453Thoc710078.531ENSSMAG00000010488thoc79978.500Scophthalmus_maximus
ENSMUSG00000053453Thoc710079.888ENSSDUG00000022145thoc79778.500Seriola_dumerili
ENSMUSG00000053453Thoc710079.888ENSSLDG00000013770thoc79980.500Seriola_lalandi_dorsalis
ENSMUSG00000053453Thoc797100.000ENSSARG00000014279-10096.954Sorex_araneus
ENSMUSG00000053453Thoc797100.000ENSSARG00000013894-10096.954Sorex_araneus
ENSMUSG00000053453Thoc79796.610ENSSPUG00000011505THOC710092.000Sphenodon_punctatus
ENSMUSG00000053453Thoc710078.771ENSSPAG00000001047thoc79979.500Stegastes_partitus
ENSMUSG00000053453Thoc710097.549ENSSSCG00000011491THOC710097.549Sus_scrofa
ENSMUSG00000053453Thoc79791.667ENSTGUG00000009431THOC79987.255Taeniopygia_guttata
ENSMUSG00000053453Thoc79881.500ENSTRUG00000025690thoc79981.500Takifugu_rubripes
ENSMUSG00000053453Thoc79781.513ENSTNIG00000006681thoc79979.500Tetraodon_nigroviridis
ENSMUSG00000053453Thoc79794.068ENSTBEG00000003371-10087.817Tupaia_belangeri
ENSMUSG00000053453Thoc797100.000ENSTBEG00000007069-10075.127Tupaia_belangeri
ENSMUSG00000053453Thoc79799.153ENSTTRG00000013618-9796.970Tursiops_truncatus
ENSMUSG00000053453Thoc77785.385ENSTTRG00000007980-10082.692Tursiops_truncatus
ENSMUSG00000053453Thoc710096.569ENSUAMG00000002790-10096.569Ursus_americanus
ENSMUSG00000053453Thoc77599.206ENSUMAG00000023513-10096.053Ursus_maritimus
ENSMUSG00000053453Thoc79786.441ENSUMAG00000011864-9786.911Ursus_maritimus
ENSMUSG00000053453Thoc797100.000ENSVPAG00000010083THOC79797.475Vicugna_pacos
ENSMUSG00000053453Thoc77598.413ENSVVUG00000014787THOC710094.737Vulpes_vulpes
ENSMUSG00000053453Thoc79793.220ENSXETG00000006539thoc79981.500Xenopus_tropicalis
ENSMUSG00000053453Thoc79782.353ENSXMAG00000002014thoc79781.218Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000346transcription export complex-ISOComponent
GO:0000347THO complex-ISOComponent
GO:0000445THO complex part of transcription export complex21873635.IBAComponent
GO:0000445THO complex part of transcription export complex-ISOComponent
GO:0000784nuclear chromosome, telomeric region-ISOComponent
GO:0003723RNA binding-IEAFunction
GO:0005515protein binding12951069.24315442.IPIFunction
GO:0005634nucleus-ISOComponent
GO:0005737cytoplasm-ISOComponent
GO:0005829cytosol-ISOComponent
GO:0006397mRNA processing-IEAProcess
GO:0006406mRNA export from nucleus21873635.IBAProcess
GO:0006406mRNA export from nucleus-ISOProcess
GO:0008380RNA splicing-IEAProcess
GO:0016607nuclear speck-ISOComponent
GO:0046784viral mRNA export from host cell nucleus-ISOProcess
GO:0051028mRNA transport-IEAProcess

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us